Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP26_F_K12
         (863 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

02_05_0932 - 32841331-32842242                                         33   0.39 
01_07_0080 - 40955222-40955676,40956123-40956171,40956282-40956443     30   2.7  
07_01_0226 - 1654917-1656923,1658757-1658810,1659128-1660891           29   6.3  
06_01_0786 - 5881178-5881303,5881523-5881627,5882078-5882169,588...    29   6.3  
02_05_1323 + 35700147-35701649                                         29   6.3  
01_04_0021 - 15151645-15151809,15152184-15152343,15152548-151530...    29   6.3  
09_04_0448 + 17692650-17692970,17693461-17693811                       28   8.4  
03_06_0060 + 31341233-31342009,31342752-31342871,31343401-313435...    28   8.4  

>02_05_0932 - 32841331-32842242
          Length = 303

 Score = 32.7 bits (71), Expect = 0.39
 Identities = 36/126 (28%), Positives = 57/126 (45%), Gaps = 7/126 (5%)
 Frame = +1

Query: 154 AAVCCSPTEART---SKTTACSPL-TG--LTSSQR-LRFGQMPVLVIDGKQYAQSTAICR 312
           A     P  AR+   S+ +   P  TG  LT ++R +RF  + V+V DG+   +   + R
Sbjct: 163 AVTAAEPASARSILSSRASRRQPAATGGILTPARRAVRFSPVAVVVDDGEHGCRDAGVAR 222

Query: 313 YLGRKYGLAGANDEEAFEIDQNVEFLHDIRAKAAAVYYEADEELKAKKHEDFSKNVYPEY 492
             G +  +A A  E A E ++ VE L  +RA   A   E  +E      + F     P +
Sbjct: 223 LRGAEREVAAA-QESAAEAERRVEEL--LRALGVAEESERAKESSESSSDLFELESLPAF 279

Query: 493 VEEVEL 510
            ++ EL
Sbjct: 280 -DDAEL 284


>01_07_0080 - 40955222-40955676,40956123-40956171,40956282-40956443
          Length = 221

 Score = 29.9 bits (64), Expect = 2.7
 Identities = 15/34 (44%), Positives = 20/34 (58%)
 Frame = +1

Query: 247 FGQMPVLVIDGKQYAQSTAICRYLGRKYGLAGAN 348
           FGQ+PVL    +   +S AI RY+  KY   GA+
Sbjct: 56  FGQIPVLQDGDEVLYESRAINRYIATKYKAEGAD 89


>07_01_0226 - 1654917-1656923,1658757-1658810,1659128-1660891
          Length = 1274

 Score = 28.7 bits (61), Expect = 6.3
 Identities = 25/67 (37%), Positives = 33/67 (49%), Gaps = 9/67 (13%)
 Frame = -3

Query: 510 EFNFFNIFRVY--VLRKVLVFFCF*LLISFV-------VYSGRFGANIVQELHVLVDLEG 358
           EF+FFN F  Y  VL   L FF F   +S +       +YSG  GAN+  +    V  +G
Sbjct: 588 EFSFFNTFTSYARVLLLDLFFFLFISNLSALATGEDQFIYSGFNGANLTLDGVASVTPDG 647

Query: 357 LLVIGPG 337
           LL +  G
Sbjct: 648 LLKLTNG 654


>06_01_0786 -
           5881178-5881303,5881523-5881627,5882078-5882169,
           5882267-5882336,5882639-5882724,5882916-5883017,
           5883375-5883597,5883693-5883758,5883896-5883986,
           5884019-5884057,5885401-5885548,5885623-5885715,
           5885782-5885886,5886645-5886826,5886912-5887084
          Length = 566

 Score = 28.7 bits (61), Expect = 6.3
 Identities = 14/37 (37%), Positives = 17/37 (45%)
 Frame = -1

Query: 245 RSLWLEVRPVSGEHAVVFEVLASVGEQHTAALPESLA 135
           R LW+E RP  G  AV+ +  A  G       PE  A
Sbjct: 46  RLLWVETRPEEGGRAVLVKEAAEPGGDAVDVTPEGFA 82


>02_05_1323 + 35700147-35701649
          Length = 500

 Score = 28.7 bits (61), Expect = 6.3
 Identities = 14/29 (48%), Positives = 18/29 (62%)
 Frame = +1

Query: 73  SARRLTTIN*KCLRLCTITSLARLSGRAA 159
           SARR+  +N  C  +C+ TSL    GRAA
Sbjct: 140 SARRVFDVNVSCRDVCSWTSLLTAYGRAA 168


>01_04_0021 -
           15151645-15151809,15152184-15152343,15152548-15153025,
           15153243-15153291,15153585-15153734
          Length = 333

 Score = 28.7 bits (61), Expect = 6.3
 Identities = 14/28 (50%), Positives = 17/28 (60%)
 Frame = +1

Query: 247 FGQMPVLVIDGKQYAQSTAICRYLGRKY 330
           FG++PVL        QS AI RY+ RKY
Sbjct: 52  FGEIPVLEDGDLTLYQSRAIARYIFRKY 79


>09_04_0448 + 17692650-17692970,17693461-17693811
          Length = 223

 Score = 28.3 bits (60), Expect = 8.4
 Identities = 12/22 (54%), Positives = 16/22 (72%)
 Frame = +1

Query: 253 QMPVLVIDGKQYAQSTAICRYL 318
           ++PVLV DGK  A+ST I  Y+
Sbjct: 55  KVPVLVHDGKPLAESTVIVEYI 76


>03_06_0060 +
           31341233-31342009,31342752-31342871,31343401-31343517,
           31343615-31343704,31344279-31344386,31345124-31345306
          Length = 464

 Score = 28.3 bits (60), Expect = 8.4
 Identities = 11/29 (37%), Positives = 17/29 (58%)
 Frame = -3

Query: 726 KNSNSYGLPKSKKAFTLGCVRTDCKTFLK 640
           ++S+ YGL    K   LGC + DC+  L+
Sbjct: 203 RSSSGYGLDSQVKRRWLGCSKVDCEHLLR 231


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,053,746
Number of Sequences: 37544
Number of extensions: 330317
Number of successful extensions: 1047
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 1022
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1046
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2420970504
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)