Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP26_F_K10
         (915 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

11_06_0514 - 24477720-24479915                                         30   2.2  
06_01_0108 - 860080-860162,860276-860338,860857-860974,861481-86...    28   9.0  

>11_06_0514 - 24477720-24479915
          Length = 731

 Score = 30.3 bits (65), Expect = 2.2
 Identities = 13/23 (56%), Positives = 18/23 (78%)
 Frame = -3

Query: 214 RVGRAFRFFTLASGLVIIFLWTR 146
           R+GR  RFFTLA+ +V + L+TR
Sbjct: 291 RLGRGLRFFTLAAPVVSLVLFTR 313


>06_01_0108 -
           860080-860162,860276-860338,860857-860974,861481-861492
          Length = 91

 Score = 28.3 bits (60), Expect = 9.0
 Identities = 10/21 (47%), Positives = 13/21 (61%)
 Frame = +2

Query: 269 PIQTNRPGLLXLXGKXKCDAW 331
           P+ T RPG+  L  + K DAW
Sbjct: 40  PVTTGRPGIFNLKDRYKWDAW 60


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,480,342
Number of Sequences: 37544
Number of extensions: 221053
Number of successful extensions: 268
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 268
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 268
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2600672280
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)