Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP26_F_K08
(864 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 46 5e-05
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 46 5e-05
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 46 5e-05
AL032652-4|CAB63398.1| 486|Caenorhabditis elegans Hypothetical ... 38 0.012
AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical ... 36 0.028
AF000298-11|AAM97960.1| 518|Caenorhabditis elegans Prion-like-(... 33 0.26
AF000298-10|AAM97961.1| 539|Caenorhabditis elegans Prion-like-(... 33 0.26
AF000298-8|AAC48255.2| 524|Caenorhabditis elegans Prion-like-(q... 33 0.26
AL110477-13|CAB54337.2| 789|Caenorhabditis elegans Hypothetical... 32 0.46
AF230279-1|AAG16654.1| 789|Caenorhabditis elegans SWI3-like pro... 32 0.46
AF039052-9|AAF98625.1| 302|Caenorhabditis elegans Hypothetical ... 32 0.61
AF025467-2|AAN65301.1| 505|Caenorhabditis elegans Hypothetical ... 31 0.80
AF025467-1|AAB71039.2| 528|Caenorhabditis elegans Hypothetical ... 31 0.80
AF003151-19|AAK18922.1| 988|Caenorhabditis elegans Hypothetical... 30 1.9
U88309-2|AAB42334.1| 211|Caenorhabditis elegans Hypothetical pr... 30 2.4
AL032634-3|CAE45092.1| 412|Caenorhabditis elegans Hypothetical ... 30 2.4
AF000299-1|AAC47980.1| 210|Caenorhabditis elegans Hypothetical ... 30 2.4
AF000198-8|AAP68908.1| 435|Caenorhabditis elegans Collagen prot... 29 3.2
Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical pr... 29 4.3
U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA bi... 29 4.3
AF098501-3|AAM69106.1| 275|Caenorhabditis elegans Hypothetical ... 29 4.3
AF098501-2|AAM69105.1| 298|Caenorhabditis elegans Hypothetical ... 29 4.3
AF098501-1|AAC67404.2| 548|Caenorhabditis elegans Hypothetical ... 29 4.3
Z68338-7|CAA92756.2| 866|Caenorhabditis elegans Hypothetical pr... 29 5.7
AF045646-2|AAK29827.1| 371|Caenorhabditis elegans Collagen prot... 29 5.7
Z82053-1|CAB04834.1| 233|Caenorhabditis elegans Hypothetical pr... 28 9.9
U80451-8|AAB37842.2| 288|Caenorhabditis elegans Collagen protei... 28 9.9
U58736-1|AAB00598.1| 302|Caenorhabditis elegans Dumpy : shorter... 28 9.9
U41538-2|AAG00010.1| 997|Caenorhabditis elegans Hypothetical pr... 28 9.9
U23172-13|ABH03527.1| 282|Caenorhabditis elegans Hypothetical p... 28 9.9
U23172-12|ABH03526.1| 562|Caenorhabditis elegans Hypothetical p... 28 9.9
AF067219-3|AAC17027.1| 74|Caenorhabditis elegans Hypothetical ... 28 9.9
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 45.6 bits (103), Expect = 5e-05
Identities = 24/62 (38%), Positives = 26/62 (41%), Gaps = 2/62 (3%)
Frame = +1
Query: 664 GGXXXPPPPGGXX--KXGPPPXGXKRGGXXXXXPKKKXGGXPFXXXXPXPPPGXXPPCSP 837
GG PPPPGG GPPP GG P GG P PPPG P +P
Sbjct: 740 GGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFK-GGPPPPPPPGMFAPMAP 798
Query: 838 XL 843
+
Sbjct: 799 VI 800
Score = 36.7 bits (81), Expect = 0.021
Identities = 24/59 (40%), Positives = 24/59 (40%), Gaps = 1/59 (1%)
Frame = +1
Query: 664 GGXXXPPPPGGXXK-XGPPPXGXKRGGXXXXXPKKKXGGXPFXXXXPXPPPGXXPPCSP 837
GG PPPPGG G PP GG GG P P PPPG PP P
Sbjct: 724 GGPPPPPPPGGLPPITGGPPPPPPPGGLPPI-----SGGPP----PPPPPPGGCPPPPP 773
Score = 27.9 bits (59), Expect = 9.9
Identities = 14/31 (45%), Positives = 14/31 (45%), Gaps = 5/31 (16%)
Frame = -2
Query: 740 PPRXXPXGGGPXXXXPPGG-----GGXXXPP 663
PP P GGP PPGG GG PP
Sbjct: 716 PPGLPPITGGPPPPPPPGGLPPITGGPPPPP 746
Score = 27.9 bits (59), Expect = 9.9
Identities = 17/50 (34%), Positives = 17/50 (34%), Gaps = 1/50 (2%)
Frame = -2
Query: 809 GGXGXXXXKGXPPXFFLGXXKXXPPRXXPX-GGGPXXXXPPGGGGXXXPP 663
GG G P G PP P GGP PP GG PP
Sbjct: 724 GGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPP 773
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 45.6 bits (103), Expect = 5e-05
Identities = 24/62 (38%), Positives = 26/62 (41%), Gaps = 2/62 (3%)
Frame = +1
Query: 664 GGXXXPPPPGGXX--KXGPPPXGXKRGGXXXXXPKKKXGGXPFXXXXPXPPPGXXPPCSP 837
GG PPPPGG GPPP GG P GG P PPPG P +P
Sbjct: 740 GGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFK-GGPPPPPPPGMFAPMAP 798
Query: 838 XL 843
+
Sbjct: 799 VI 800
Score = 36.7 bits (81), Expect = 0.021
Identities = 24/59 (40%), Positives = 24/59 (40%), Gaps = 1/59 (1%)
Frame = +1
Query: 664 GGXXXPPPPGGXXK-XGPPPXGXKRGGXXXXXPKKKXGGXPFXXXXPXPPPGXXPPCSP 837
GG PPPPGG G PP GG GG P P PPPG PP P
Sbjct: 724 GGPPPPPPPGGLPPITGGPPPPPPPGGLPPI-----SGGPP----PPPPPPGGCPPPPP 773
Score = 27.9 bits (59), Expect = 9.9
Identities = 14/31 (45%), Positives = 14/31 (45%), Gaps = 5/31 (16%)
Frame = -2
Query: 740 PPRXXPXGGGPXXXXPPGG-----GGXXXPP 663
PP P GGP PPGG GG PP
Sbjct: 716 PPGLPPITGGPPPPPPPGGLPPITGGPPPPP 746
Score = 27.9 bits (59), Expect = 9.9
Identities = 17/50 (34%), Positives = 17/50 (34%), Gaps = 1/50 (2%)
Frame = -2
Query: 809 GGXGXXXXKGXPPXFFLGXXKXXPPRXXPX-GGGPXXXXPPGGGGXXXPP 663
GG G P G PP P GGP PP GG PP
Sbjct: 724 GGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPP 773
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 45.6 bits (103), Expect = 5e-05
Identities = 24/62 (38%), Positives = 26/62 (41%), Gaps = 2/62 (3%)
Frame = +1
Query: 664 GGXXXPPPPGGXX--KXGPPPXGXKRGGXXXXXPKKKXGGXPFXXXXPXPPPGXXPPCSP 837
GG PPPPGG GPPP GG P GG P PPPG P +P
Sbjct: 323 GGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFK-GGPPPPPPPGMFAPMAP 381
Query: 838 XL 843
+
Sbjct: 382 VI 383
Score = 36.7 bits (81), Expect = 0.021
Identities = 24/59 (40%), Positives = 24/59 (40%), Gaps = 1/59 (1%)
Frame = +1
Query: 664 GGXXXPPPPGGXXK-XGPPPXGXKRGGXXXXXPKKKXGGXPFXXXXPXPPPGXXPPCSP 837
GG PPPPGG G PP GG GG P P PPPG PP P
Sbjct: 307 GGPPPPPPPGGLPPITGGPPPPPPPGGLPPI-----SGGPP----PPPPPPGGCPPPPP 356
Score = 27.9 bits (59), Expect = 9.9
Identities = 14/31 (45%), Positives = 14/31 (45%), Gaps = 5/31 (16%)
Frame = -2
Query: 740 PPRXXPXGGGPXXXXPPGG-----GGXXXPP 663
PP P GGP PPGG GG PP
Sbjct: 299 PPGLPPITGGPPPPPPPGGLPPITGGPPPPP 329
Score = 27.9 bits (59), Expect = 9.9
Identities = 17/50 (34%), Positives = 17/50 (34%), Gaps = 1/50 (2%)
Frame = -2
Query: 809 GGXGXXXXKGXPPXFFLGXXKXXPPRXXPX-GGGPXXXXPPGGGGXXXPP 663
GG G P G PP P GGP PP GG PP
Sbjct: 307 GGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPP 356
>AL032652-4|CAB63398.1| 486|Caenorhabditis elegans Hypothetical
protein Y63D3A.5 protein.
Length = 486
Score = 37.5 bits (83), Expect = 0.012
Identities = 17/40 (42%), Positives = 17/40 (42%)
Frame = +1
Query: 667 GXXXPPPPGGXXKXGPPPXGXKRGGXXXXXPKKKXGGXPF 786
G PPPPGG GPPP G G GG PF
Sbjct: 431 GGFGPPPPGGPGAYGPPPTGFPPVGAPPPGAAGAPGGNPF 470
Score = 33.9 bits (74), Expect = 0.15
Identities = 19/60 (31%), Positives = 20/60 (33%)
Frame = +3
Query: 672 GXPPPPXGXXXXGXPPPGXXTGGGXFXXXQKKXGGXSFXXXXSXXPPGXXPPLFPXFGXP 851
G P P G G PPPG G + Q GG G P FP G P
Sbjct: 398 GAPQGPGGPGGYGPPPPGGPGAPGSYGPPQGGPGGFGPPPPGGPGAYGPPPTGFPPVGAP 457
Score = 30.3 bits (65), Expect = 1.9
Identities = 19/49 (38%), Positives = 20/49 (40%), Gaps = 1/49 (2%)
Frame = -2
Query: 806 GXGXXXXKGXPPXFFLGXX-KXXPPRXXPXGGGPXXXXPPGGGGXXXPP 663
G G G PP G PP+ P G GP PPGG G PP
Sbjct: 402 GPGGPGGYGPPPPGGPGAPGSYGPPQGGPGGFGP---PPPGGPGAYGPP 447
Score = 29.9 bits (64), Expect = 2.4
Identities = 17/54 (31%), Positives = 19/54 (35%)
Frame = +1
Query: 667 GXXXPPPPGGXXKXGPPPXGXKRGGXXXXXPKKKXGGXPFXXXXPXPPPGXXPP 828
G PPPPGG P G +GG P G + PP PP
Sbjct: 407 GGYGPPPPGGPG--APGSYGPPQGGPGGFGPPPPGGPGAYGPPPTGFPPVGAPP 458
>AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical
protein F59E12.9 protein.
Length = 1621
Score = 36.3 bits (80), Expect = 0.028
Identities = 22/52 (42%), Positives = 23/52 (44%), Gaps = 2/52 (3%)
Frame = +1
Query: 679 PPPPGGXX--KXGPPPXGXKRGGXXXXXPKKKXGGXPFXXXXPXPPPGXXPP 828
PPP GG + GPPP RGG P GG P PPPG PP
Sbjct: 1560 PPPHGGMNGWRGGPPPP---RGGSHCQGPPPLMGGPP--PRLGMPPPGPPPP 1606
>AF000298-11|AAM97960.1| 518|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform b protein.
Length = 518
Score = 33.1 bits (72), Expect = 0.26
Identities = 19/60 (31%), Positives = 19/60 (31%)
Frame = +1
Query: 667 GXXXPPPPGGXXKXGPPPXGXKRGGXXXXXPKKKXGGXPFXXXXPXPPPGXXPPCSPXLG 846
G PPPP PP G P GG P PPP P SP G
Sbjct: 251 GSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPPPPPPRGSPPTG 310
Score = 32.3 bits (70), Expect = 0.46
Identities = 19/58 (32%), Positives = 19/58 (32%), Gaps = 2/58 (3%)
Frame = +1
Query: 685 PPGGXXKXGPPPXGXK--RGGXXXXXPKKKXGGXPFXXXXPXPPPGXXPPCSPXLGFP 852
PP G PPP G G P P P PPP PP P G P
Sbjct: 232 PPAGSPPPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSP 289
Score = 30.7 bits (66), Expect = 1.4
Identities = 21/65 (32%), Positives = 22/65 (33%), Gaps = 3/65 (4%)
Frame = +1
Query: 667 GXXXPPPPGGXXKXGPPPXGXKRGGXXXXXPKKKXGGXPFXXXXPXPPP---GXXPPCSP 837
G PPP G PPP G G P+ P P PPP P SP
Sbjct: 286 GGSPPPPRAGSPPPPPPPRGSPPTGSLPP-PQAGGSPPPAGTGSPPPPPRQKRQAPERSP 344
Query: 838 XLGFP 852
G P
Sbjct: 345 PTGSP 349
Score = 29.9 bits (64), Expect = 2.4
Identities = 21/70 (30%), Positives = 22/70 (31%), Gaps = 3/70 (4%)
Frame = +1
Query: 664 GGXXXPPPPGGXXKX---GPPPXGXKRGGXXXXXPKKKXGGXPFXXXXPXPPPGXXPPCS 834
G PPPP G G PP G P + P P PPP P
Sbjct: 235 GSPPPPPPPKGSPPLAGSGSPPPPPAAGSPP---PPRTGSPPPPPTGSPPPPPAGGSPPP 291
Query: 835 PXLGFPKXFP 864
P G P P
Sbjct: 292 PRAGSPPPPP 301
>AF000298-10|AAM97961.1| 539|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform c protein.
Length = 539
Score = 33.1 bits (72), Expect = 0.26
Identities = 19/60 (31%), Positives = 19/60 (31%)
Frame = +1
Query: 667 GXXXPPPPGGXXKXGPPPXGXKRGGXXXXXPKKKXGGXPFXXXXPXPPPGXXPPCSPXLG 846
G PPPP PP G P GG P PPP P SP G
Sbjct: 272 GSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPPPPPPRGSPPTG 331
Score = 32.3 bits (70), Expect = 0.46
Identities = 19/58 (32%), Positives = 19/58 (32%), Gaps = 2/58 (3%)
Frame = +1
Query: 685 PPGGXXKXGPPPXGXK--RGGXXXXXPKKKXGGXPFXXXXPXPPPGXXPPCSPXLGFP 852
PP G PPP G G P P P PPP PP P G P
Sbjct: 253 PPAGSPPPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSP 310
Score = 30.7 bits (66), Expect = 1.4
Identities = 21/65 (32%), Positives = 22/65 (33%), Gaps = 3/65 (4%)
Frame = +1
Query: 667 GXXXPPPPGGXXKXGPPPXGXKRGGXXXXXPKKKXGGXPFXXXXPXPPP---GXXPPCSP 837
G PPP G PPP G G P+ P P PPP P SP
Sbjct: 307 GGSPPPPRAGSPPPPPPPRGSPPTGSLPP-PQAGGSPPPAGTGSPPPPPRQKRQAPERSP 365
Query: 838 XLGFP 852
G P
Sbjct: 366 PTGSP 370
Score = 29.9 bits (64), Expect = 2.4
Identities = 21/70 (30%), Positives = 22/70 (31%), Gaps = 3/70 (4%)
Frame = +1
Query: 664 GGXXXPPPPGGXXKX---GPPPXGXKRGGXXXXXPKKKXGGXPFXXXXPXPPPGXXPPCS 834
G PPPP G G PP G P + P P PPP P
Sbjct: 256 GSPPPPPPPKGSPPLAGSGSPPPPPAAGSPP---PPRTGSPPPPPTGSPPPPPAGGSPPP 312
Query: 835 PXLGFPKXFP 864
P G P P
Sbjct: 313 PRAGSPPPPP 322
>AF000298-8|AAC48255.2| 524|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform a protein.
Length = 524
Score = 33.1 bits (72), Expect = 0.26
Identities = 19/60 (31%), Positives = 19/60 (31%)
Frame = +1
Query: 667 GXXXPPPPGGXXKXGPPPXGXKRGGXXXXXPKKKXGGXPFXXXXPXPPPGXXPPCSPXLG 846
G PPPP PP G P GG P PPP P SP G
Sbjct: 257 GSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPPPPPPRGSPPTG 316
Score = 32.3 bits (70), Expect = 0.46
Identities = 19/58 (32%), Positives = 19/58 (32%), Gaps = 2/58 (3%)
Frame = +1
Query: 685 PPGGXXKXGPPPXGXK--RGGXXXXXPKKKXGGXPFXXXXPXPPPGXXPPCSPXLGFP 852
PP G PPP G G P P P PPP PP P G P
Sbjct: 238 PPAGSPPPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSP 295
Score = 30.7 bits (66), Expect = 1.4
Identities = 21/65 (32%), Positives = 22/65 (33%), Gaps = 3/65 (4%)
Frame = +1
Query: 667 GXXXPPPPGGXXKXGPPPXGXKRGGXXXXXPKKKXGGXPFXXXXPXPPP---GXXPPCSP 837
G PPP G PPP G G P+ P P PPP P SP
Sbjct: 292 GGSPPPPRAGSPPPPPPPRGSPPTGSLPP-PQAGGSPPPAGTGSPPPPPRQKRQAPERSP 350
Query: 838 XLGFP 852
G P
Sbjct: 351 PTGSP 355
Score = 29.9 bits (64), Expect = 2.4
Identities = 21/70 (30%), Positives = 22/70 (31%), Gaps = 3/70 (4%)
Frame = +1
Query: 664 GGXXXPPPPGGXXKX---GPPPXGXKRGGXXXXXPKKKXGGXPFXXXXPXPPPGXXPPCS 834
G PPPP G G PP G P + P P PPP P
Sbjct: 241 GSPPPPPPPKGSPPLAGSGSPPPPPAAGSPP---PPRTGSPPPPPTGSPPPPPAGGSPPP 297
Query: 835 PXLGFPKXFP 864
P G P P
Sbjct: 298 PRAGSPPPPP 307
>AL110477-13|CAB54337.2| 789|Caenorhabditis elegans Hypothetical
protein Y113G7B.23 protein.
Length = 789
Score = 32.3 bits (70), Expect = 0.46
Identities = 25/74 (33%), Positives = 29/74 (39%), Gaps = 7/74 (9%)
Frame = +1
Query: 664 GGXXXPPPPGGXXKXG-PPPXGXKRGGXXXXXPKKKXGGXPF-XXXXPXPPP-----GXX 822
GG PPPP G G PPP G G P+++ P+ P PPP G
Sbjct: 676 GGQGPPPPPQGQQYYGGPPPPGQPYGPPGGYPPQQQR--PPYQAQPYPGPPPPQQQRGYG 733
Query: 823 PPCSPXLGFPKXFP 864
P P G P P
Sbjct: 734 YPPPPQPGHPYQQP 747
Score = 30.3 bits (65), Expect = 1.9
Identities = 11/19 (57%), Positives = 11/19 (57%)
Frame = +3
Query: 666 GXGXPPPPXGXXXXGXPPP 722
G G PPPP G G PPP
Sbjct: 677 GQGPPPPPQGQQYYGGPPP 695
>AF230279-1|AAG16654.1| 789|Caenorhabditis elegans SWI3-like
protein protein.
Length = 789
Score = 32.3 bits (70), Expect = 0.46
Identities = 25/74 (33%), Positives = 29/74 (39%), Gaps = 7/74 (9%)
Frame = +1
Query: 664 GGXXXPPPPGGXXKXG-PPPXGXKRGGXXXXXPKKKXGGXPF-XXXXPXPPP-----GXX 822
GG PPPP G G PPP G G P+++ P+ P PPP G
Sbjct: 676 GGQGPPPPPQGQQYYGGPPPPGQPYGPPGGYPPQQQR--PPYQAQPYPGPPPPQQQRGYG 733
Query: 823 PPCSPXLGFPKXFP 864
P P G P P
Sbjct: 734 YPPPPQPGHPYQQP 747
Score = 30.3 bits (65), Expect = 1.9
Identities = 11/19 (57%), Positives = 11/19 (57%)
Frame = +3
Query: 666 GXGXPPPPXGXXXXGXPPP 722
G G PPPP G G PPP
Sbjct: 677 GQGPPPPPQGQQYYGGPPP 695
>AF039052-9|AAF98625.1| 302|Caenorhabditis elegans Hypothetical
protein T22D1.2 protein.
Length = 302
Score = 31.9 bits (69), Expect = 0.61
Identities = 15/49 (30%), Positives = 18/49 (36%)
Frame = +1
Query: 679 PPPPGGXXKXGPPPXGXKRGGXXXXXPKKKXGGXPFXXXXPXPPPGXXP 825
PPPP G PPP G + ++ P P PPP P
Sbjct: 128 PPPPKGTGSPPPPPTGEPQDLSGEGNASRRPPPPPKGTGSPPPPPTGEP 176
Score = 31.9 bits (69), Expect = 0.61
Identities = 15/49 (30%), Positives = 18/49 (36%)
Frame = +1
Query: 679 PPPPGGXXKXGPPPXGXKRGGXXXXXPKKKXGGXPFXXXXPXPPPGXXP 825
PPPP G PPP G + ++ P P PPP P
Sbjct: 159 PPPPKGTGSPPPPPTGEPQDLSTEGNASRRPPPPPKGTGTPPPPPTGEP 207
Score = 31.9 bits (69), Expect = 0.61
Identities = 15/49 (30%), Positives = 18/49 (36%)
Frame = +1
Query: 679 PPPPGGXXKXGPPPXGXKRGGXXXXXPKKKXGGXPFXXXXPXPPPGXXP 825
PPPP G PPP G + ++ P P PPP P
Sbjct: 221 PPPPKGTGSPTPPPTGEPQDLSGEGNASRRPPPPPKGTGSPPPPPTGEP 269
Score = 31.5 bits (68), Expect = 0.80
Identities = 15/49 (30%), Positives = 18/49 (36%)
Frame = +1
Query: 679 PPPPGGXXKXGPPPXGXKRGGXXXXXPKKKXGGXPFXXXXPXPPPGXXP 825
PPPP G PPP G + ++ P P PPP P
Sbjct: 34 PPPPKGTGTPPPPPTGEPQDLSGEGNASRRPPPPPKGTGTPPPPPTGEP 82
Score = 31.5 bits (68), Expect = 0.80
Identities = 15/49 (30%), Positives = 18/49 (36%)
Frame = +1
Query: 679 PPPPGGXXKXGPPPXGXKRGGXXXXXPKKKXGGXPFXXXXPXPPPGXXP 825
PPPP G PPP G + ++ P P PPP P
Sbjct: 97 PPPPKGTGTPPPPPTGEPQDLSGEGNASRRPPPPPKGTGSPPPPPTGEP 145
Score = 31.5 bits (68), Expect = 0.80
Identities = 15/49 (30%), Positives = 18/49 (36%)
Frame = +1
Query: 679 PPPPGGXXKXGPPPXGXKRGGXXXXXPKKKXGGXPFXXXXPXPPPGXXP 825
PPPP G PPP G + ++ P P PPP P
Sbjct: 190 PPPPKGTGTPPPPPTGEPQDLSAEGYASRRPPPPPKGTGSPTPPPTGEP 238
Score = 29.9 bits (64), Expect = 2.4
Identities = 14/46 (30%), Positives = 17/46 (36%)
Frame = +1
Query: 679 PPPPGGXXKXGPPPXGXKRGGXXXXXPKKKXGGXPFXXXXPXPPPG 816
PPPP G PPP G + ++ P P PP G
Sbjct: 252 PPPPKGTGSPPPPPTGEPQDLSGEGNASRRPPPPPKGTGTPPPPTG 297
>AF025467-2|AAN65301.1| 505|Caenorhabditis elegans Hypothetical
protein R148.5b protein.
Length = 505
Score = 31.5 bits (68), Expect = 0.80
Identities = 22/66 (33%), Positives = 24/66 (36%), Gaps = 9/66 (13%)
Frame = +1
Query: 667 GXXXPPPPGGXXKXGPPPX---------GXKRGGXXXXXPKKKXGGXPFXXXXPXPPPGX 819
G PPPP + PPP G RG P GG P+ P PPP
Sbjct: 302 GHFPPPPPHFMGRGMPPPFMPPPPHFGMGPPRGFMPPPHPMMFRGG-PYPPFFPPPPPHF 360
Query: 820 XPPCSP 837
P SP
Sbjct: 361 MRPSSP 366
>AF025467-1|AAB71039.2| 528|Caenorhabditis elegans Hypothetical
protein R148.5a protein.
Length = 528
Score = 31.5 bits (68), Expect = 0.80
Identities = 22/66 (33%), Positives = 24/66 (36%), Gaps = 9/66 (13%)
Frame = +1
Query: 667 GXXXPPPPGGXXKXGPPPX---------GXKRGGXXXXXPKKKXGGXPFXXXXPXPPPGX 819
G PPPP + PPP G RG P GG P+ P PPP
Sbjct: 302 GHFPPPPPHFMGRGMPPPFMPPPPHFGMGPPRGFMPPPHPMMFRGG-PYPPFFPPPPPHF 360
Query: 820 XPPCSP 837
P SP
Sbjct: 361 MRPSSP 366
>AF003151-19|AAK18922.1| 988|Caenorhabditis elegans Hypothetical
protein D1007.7 protein.
Length = 988
Score = 30.3 bits (65), Expect = 1.9
Identities = 18/56 (32%), Positives = 18/56 (32%), Gaps = 4/56 (7%)
Frame = +3
Query: 588 FXXXPPPXXFFXXXFXXXXPXXXXXXGXGX----PPPPXGXXXXGXPPPGXXTGGG 743
F PP F F P G G PPPP G PPP G G
Sbjct: 737 FDPNKPPPPMFQQGFNAGAPPPPFGRGAGPMSSFPPPPRGGMHHMPPPPSFRGGRG 792
Score = 28.3 bits (60), Expect = 7.5
Identities = 17/48 (35%), Positives = 17/48 (35%), Gaps = 2/48 (4%)
Frame = -2
Query: 800 GXXXXKGXPPXFFLGXXKXXPPRXXPXGGGPX--XXXPPGGGGXXXPP 663
G K PP F G PP G GP PP GG PP
Sbjct: 736 GFDPNKPPPPMFQQGFNAGAPPPPFGRGAGPMSSFPPPPRGGMHHMPP 783
>U88309-2|AAB42334.1| 211|Caenorhabditis elegans Hypothetical
protein T23B3.5 protein.
Length = 211
Score = 29.9 bits (64), Expect = 2.4
Identities = 11/19 (57%), Positives = 11/19 (57%)
Frame = +1
Query: 664 GGXXXPPPPGGXXKXGPPP 720
GG PPPP K GPPP
Sbjct: 24 GGKKKPPPPKSASKMGPPP 42
>AL032634-3|CAE45092.1| 412|Caenorhabditis elegans Hypothetical
protein Y39G8C.4 protein.
Length = 412
Score = 29.9 bits (64), Expect = 2.4
Identities = 18/55 (32%), Positives = 19/55 (34%), Gaps = 2/55 (3%)
Frame = +1
Query: 679 PPPPGGXXKXGPPPXGXKRGGXXXXXPKKKXG--GXPFXXXXPXPPPGXXPPCSP 837
P PPG GPP +RG P G G P P PP P P
Sbjct: 215 PGPPGPPGPVGPPGDSGERGNIHEGGPPGIVGGSGAPGVHGIPGPPGAPGLPGDP 269
>AF000299-1|AAC47980.1| 210|Caenorhabditis elegans Hypothetical
protein E03H12.5 protein.
Length = 210
Score = 29.9 bits (64), Expect = 2.4
Identities = 11/19 (57%), Positives = 11/19 (57%)
Frame = +1
Query: 664 GGXXXPPPPGGXXKXGPPP 720
GG PPPP K GPPP
Sbjct: 24 GGKKKPPPPKSASKMGPPP 42
>AF000198-8|AAP68908.1| 435|Caenorhabditis elegans Collagen protein
51 protein.
Length = 435
Score = 29.5 bits (63), Expect = 3.2
Identities = 19/53 (35%), Positives = 21/53 (39%)
Frame = -2
Query: 836 GEQGGXXPGGGXGXXXXKGXPPXFFLGXXKXXPPRXXPXGGGPXXXXPPGGGG 678
G+ GG GG G G + PPR P GGG P GGGG
Sbjct: 287 GQPGGPGQPGGPGQDGGPGTDAAYC-----PCPPRT-PAGGGGGGDFPAGGGG 333
>Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical
protein C08B11.5 protein.
Length = 388
Score = 29.1 bits (62), Expect = 4.3
Identities = 19/71 (26%), Positives = 23/71 (32%), Gaps = 9/71 (12%)
Frame = +1
Query: 679 PPPPGGXXKXGPPPXGXKRGGXXXXXPKKKXGGXPFXXXXPXPPP---------GXXPPC 831
PP PG + PPP P + G P PPP G PP
Sbjct: 278 PPTPGMTPRPPPPPSSGMWPPPPPPPPGRTPGPPGMPGMPPPPPPSRFGPPGMGGMPPPP 337
Query: 832 SPXLGFPKXFP 864
P + +P P
Sbjct: 338 PPGMRYPGGMP 348
Score = 29.1 bits (62), Expect = 4.3
Identities = 18/52 (34%), Positives = 20/52 (38%), Gaps = 1/52 (1%)
Frame = +1
Query: 685 PPGGXXKXGPPPXGXK-RGGXXXXXPKKKXGGXPFXXXXPXPPPGXXPPCSP 837
PPG PPP G + GG P + P P PPP PP P
Sbjct: 327 PPGMGGMPPPPPPGMRYPGGMPPPPPPRYPSAGP--GMYPPPPPS-RPPAPP 375
Score = 27.9 bits (59), Expect = 9.9
Identities = 18/55 (32%), Positives = 19/55 (34%), Gaps = 5/55 (9%)
Frame = +1
Query: 664 GGXXXPPPPG----GXXKXGPPPXGXKRG-GXXXXXPKKKXGGXPFXXXXPXPPP 813
GG PPPPG G PPP G G P + P PPP
Sbjct: 331 GGMPPPPPPGMRYPGGMPPPPPPRYPSAGPGMYPPPPPSRPPAPPSGHGMIPPPP 385
>U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA
binding protein protein.
Length = 398
Score = 29.1 bits (62), Expect = 4.3
Identities = 19/71 (26%), Positives = 23/71 (32%), Gaps = 9/71 (12%)
Frame = +1
Query: 679 PPPPGGXXKXGPPPXGXKRGGXXXXXPKKKXGGXPFXXXXPXPPP---------GXXPPC 831
PP PG + PPP P + G P PPP G PP
Sbjct: 288 PPTPGMTPRPPPPPSSGMWPPPPPPPPGRTPGPPGMPGMPPPPPPSRFGPPGMGGMPPPP 347
Query: 832 SPXLGFPKXFP 864
P + +P P
Sbjct: 348 PPGMRYPGGMP 358
Score = 29.1 bits (62), Expect = 4.3
Identities = 18/52 (34%), Positives = 20/52 (38%), Gaps = 1/52 (1%)
Frame = +1
Query: 685 PPGGXXKXGPPPXGXK-RGGXXXXXPKKKXGGXPFXXXXPXPPPGXXPPCSP 837
PPG PPP G + GG P + P P PPP PP P
Sbjct: 337 PPGMGGMPPPPPPGMRYPGGMPPPPPPRYPSAGP--GMYPPPPPS-RPPAPP 385
Score = 27.9 bits (59), Expect = 9.9
Identities = 18/55 (32%), Positives = 19/55 (34%), Gaps = 5/55 (9%)
Frame = +1
Query: 664 GGXXXPPPPG----GXXKXGPPPXGXKRG-GXXXXXPKKKXGGXPFXXXXPXPPP 813
GG PPPPG G PPP G G P + P PPP
Sbjct: 341 GGMPPPPPPGMRYPGGMPPPPPPRYPSAGPGMYPPPPPSRPPAPPSGHGMIPPPP 395
>AF098501-3|AAM69106.1| 275|Caenorhabditis elegans Hypothetical
protein H28G03.2c protein.
Length = 275
Score = 29.1 bits (62), Expect = 4.3
Identities = 19/57 (33%), Positives = 20/57 (35%), Gaps = 5/57 (8%)
Frame = +1
Query: 682 PPPG-GXXKXGPPPXGXKRGGXXXXXPKKKXGGXPFXXXXP----XPPPGXXPPCSP 837
PPPG G PPP G P G P+ P PPP PP P
Sbjct: 83 PPPGMGPPPFMPPPIGMPPPPLGMPPPHIGLGAAPYAVPPPMSLLGPPPFSVPPSVP 139
>AF098501-2|AAM69105.1| 298|Caenorhabditis elegans Hypothetical
protein H28G03.2b protein.
Length = 298
Score = 29.1 bits (62), Expect = 4.3
Identities = 19/57 (33%), Positives = 20/57 (35%), Gaps = 5/57 (8%)
Frame = +1
Query: 682 PPPG-GXXKXGPPPXGXKRGGXXXXXPKKKXGGXPFXXXXP----XPPPGXXPPCSP 837
PPPG G PPP G P G P+ P PPP PP P
Sbjct: 106 PPPGMGPPPFMPPPIGMPPPPLGMPPPHIGLGAAPYAVPPPMSLLGPPPFSVPPSVP 162
>AF098501-1|AAC67404.2| 548|Caenorhabditis elegans Hypothetical
protein H28G03.2a protein.
Length = 548
Score = 29.1 bits (62), Expect = 4.3
Identities = 19/57 (33%), Positives = 20/57 (35%), Gaps = 5/57 (8%)
Frame = +1
Query: 682 PPPG-GXXKXGPPPXGXKRGGXXXXXPKKKXGGXPFXXXXP----XPPPGXXPPCSP 837
PPPG G PPP G P G P+ P PPP PP P
Sbjct: 356 PPPGMGPPPFMPPPIGMPPPPLGMPPPHIGLGAAPYAVPPPMSLLGPPPFSVPPSVP 412
>Z68338-7|CAA92756.2| 866|Caenorhabditis elegans Hypothetical
protein T24B8.4 protein.
Length = 866
Score = 28.7 bits (61), Expect = 5.7
Identities = 22/62 (35%), Positives = 22/62 (35%)
Frame = +1
Query: 679 PPPPGGXXKXGPPPXGXKRGGXXXXXPKKKXGGXPFXXXXPXPPPGXXPPCSPXLGFPKX 858
PP P G PPP G G P GG P P P G PP P G P
Sbjct: 67 PPVPNGFI---PPPPGP---GGIPPPPPMFAGGIP----PPPPMMGGIPPPPPMFGAPPP 116
Query: 859 FP 864
P
Sbjct: 117 PP 118
>AF045646-2|AAK29827.1| 371|Caenorhabditis elegans Collagen protein
103 protein.
Length = 371
Score = 28.7 bits (61), Expect = 5.7
Identities = 17/50 (34%), Positives = 17/50 (34%), Gaps = 2/50 (4%)
Frame = +1
Query: 664 GGXXXPPPPGGXXKXGPPPXGXKRGGXXXXXPKKKXG--GXPFXXXXPXP 807
GG P PPG GPP GG P G G P P P
Sbjct: 250 GGSSRPGPPGPAGPPGPPGNNGAPGGGYGVGPPGPPGPSGRPGAPGQPGP 299
>Z82053-1|CAB04834.1| 233|Caenorhabditis elegans Hypothetical
protein T26E3.1 protein.
Length = 233
Score = 27.9 bits (59), Expect = 9.9
Identities = 12/30 (40%), Positives = 13/30 (43%)
Frame = -2
Query: 863 GKXFGXPKXGEQGGXXPGGGXGXXXXKGXP 774
G G P+ G GG PG G G G P
Sbjct: 28 GNGGGRPRPGNGGGRPPGNGNGNGNGGGRP 57
>U80451-8|AAB37842.2| 288|Caenorhabditis elegans Collagen protein
20 protein.
Length = 288
Score = 27.9 bits (59), Expect = 9.9
Identities = 14/37 (37%), Positives = 17/37 (45%), Gaps = 1/37 (2%)
Frame = +1
Query: 667 GXXXPP-PPGGXXKXGPPPXGXKRGGXXXXXPKKKXG 774
G PP PPGG + GP G RG P+ + G
Sbjct: 156 GPKGPPGPPGGHGEPGPAGRGGPRGPPGPGGPQGEAG 192
>U58736-1|AAB00598.1| 302|Caenorhabditis elegans Dumpy : shorter
than wild-typeprotein 3 protein.
Length = 302
Score = 27.9 bits (59), Expect = 9.9
Identities = 17/53 (32%), Positives = 19/53 (35%)
Frame = +1
Query: 679 PPPPGGXXKXGPPPXGXKRGGXXXXXPKKKXGGXPFXXXXPXPPPGXXPPCSP 837
P PPG G P ++G P K G P P PPG P P
Sbjct: 191 PGPPGPSGPQGAPGVPGEKG--PTGEPGKVINGAPPGPPGPPGPPGPQGPPGP 241
>U41538-2|AAG00010.1| 997|Caenorhabditis elegans Hypothetical
protein R04E5.8a protein.
Length = 997
Score = 27.9 bits (59), Expect = 9.9
Identities = 19/65 (29%), Positives = 23/65 (35%), Gaps = 5/65 (7%)
Frame = +1
Query: 664 GGXXXPPPPGGXXKXGPPPXG--XKRGGXXXXXPKK---KXGGXPFXXXXPXPPPGXXPP 828
GG PPPP PPP +R P++ + P P PP PP
Sbjct: 134 GGSSPPPPPPPRVPRTPPPRSPPPRRPPMTPPSPQRRPPRTPPSPEPRNPPRTPPSPIPP 193
Query: 829 CSPXL 843
P L
Sbjct: 194 PPPRL 198
>U23172-13|ABH03527.1| 282|Caenorhabditis elegans Hypothetical
protein F25B5.7c protein.
Length = 282
Score = 27.9 bits (59), Expect = 9.9
Identities = 21/58 (36%), Positives = 22/58 (37%)
Frame = +1
Query: 664 GGXXXPPPPGGXXKXGPPPXGXKRGGXXXXXPKKKXGGXPFXXXXPXPPPGXXPPCSP 837
GG PPGG GPP G GG + GG P PPPG P P
Sbjct: 160 GGGDPRGPPGGMG--GPPGHGGM-GGPPGHGGQ---GGPPGHGGMGGPPPGQGGPGGP 211
>U23172-12|ABH03526.1| 562|Caenorhabditis elegans Hypothetical
protein F25B5.7a protein.
Length = 562
Score = 27.9 bits (59), Expect = 9.9
Identities = 21/58 (36%), Positives = 22/58 (37%)
Frame = +1
Query: 664 GGXXXPPPPGGXXKXGPPPXGXKRGGXXXXXPKKKXGGXPFXXXXPXPPPGXXPPCSP 837
GG PPGG GPP G GG + GG P PPPG P P
Sbjct: 440 GGGDPRGPPGGMG--GPPGHGGM-GGPPGHGGQ---GGPPGHGGMGGPPPGQGGPGGP 491
>AF067219-3|AAC17027.1| 74|Caenorhabditis elegans Hypothetical
protein R12E2.6 protein.
Length = 74
Score = 27.9 bits (59), Expect = 9.9
Identities = 10/19 (52%), Positives = 10/19 (52%)
Frame = +3
Query: 666 GXGXPPPPXGXXXXGXPPP 722
G G PPPP G PPP
Sbjct: 46 GFGPPPPPFGPVGYALPPP 64
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,519,293
Number of Sequences: 27780
Number of extensions: 293977
Number of successful extensions: 1131
Number of sequences better than 10.0: 32
Number of HSP's better than 10.0 without gapping: 337
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 817
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2160943708
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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