Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP26_F_J21
         (876 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z29095-4|CAA82348.3|  444|Caenorhabditis elegans Hypothetical pr...    36   0.050
U41104-5|AAK18976.3| 1564|Caenorhabditis elegans Twik family of ...    33   0.27 
AF038606-4|AAB92026.1|  331|Caenorhabditis elegans Hypothetical ...    32   0.47 
AF038606-3|AAX55701.1|  393|Caenorhabditis elegans Hypothetical ...    32   0.47 
AF038606-2|AAX55700.1|  404|Caenorhabditis elegans Hypothetical ...    32   0.47 
AB182367-3|BAD23998.1|  331|Caenorhabditis elegans hypothetical ...    32   0.47 
AB182367-2|BAD23997.1|  393|Caenorhabditis elegans hypothetical ...    32   0.47 
AB182367-1|BAD23996.1|  404|Caenorhabditis elegans hypothetical ...    32   0.47 
U00040-1|AAA50664.3| 1770|Caenorhabditis elegans Hypothetical pr...    32   0.62 
Z27079-9|CAA81596.2|  660|Caenorhabditis elegans Hypothetical pr...    30   2.5  
Z27079-10|CAD90180.1|  658|Caenorhabditis elegans Hypothetical p...    29   3.3  
Z81088-4|CAB03125.1|  105|Caenorhabditis elegans Hypothetical pr...    28   7.6  

>Z29095-4|CAA82348.3|  444|Caenorhabditis elegans Hypothetical
           protein R10E11.5 protein.
          Length = 444

 Score = 35.5 bits (78), Expect = 0.050
 Identities = 16/57 (28%), Positives = 27/57 (47%)
 Frame = +2

Query: 494 LQAAVQNTVQESQKLAKKVSSNVQEINEKLAPKIKAAYDDFAKNTQEVIKKIQEAAN 664
           LQ A +  VQ   +  K + SNV E+ + +   I    DD  K  ++  K ++E  +
Sbjct: 306 LQKAEEEVVQTIDQTVKNIKSNVNEVKKDVEKNIAEKVDDITKELEKSAKSLEETTD 362


>U41104-5|AAK18976.3| 1564|Caenorhabditis elegans Twik family of
            potassium channelsprotein 2 protein.
          Length = 1564

 Score = 33.1 bits (72), Expect = 0.27
 Identities = 20/60 (33%), Positives = 31/60 (51%)
 Frame = +2

Query: 467  KNATALREKLQAAVQNTVQESQKLAKKVSSNVQEINEKLAPKIKAAYDDFAKNTQEVIKK 646
            +N   + +K    VQ   +  QK+ KK + NVQ++ +K A   K      AKN Q++ KK
Sbjct: 1265 ENVQKMCKKCAKNVQKCAKNVQKMCKKCAKNVQKMCKKCAKMCKKC----AKNVQKMCKK 1320


>AF038606-4|AAB92026.1|  331|Caenorhabditis elegans Hypothetical
           protein C04C3.5a protein.
          Length = 331

 Score = 32.3 bits (70), Expect = 0.47
 Identities = 19/46 (41%), Positives = 29/46 (63%), Gaps = 3/46 (6%)
 Frame = +2

Query: 494 LQAAVQNTVQESQKLAKK---VSSNVQEINEKLAPKIKAAYDDFAK 622
           LQA VQN  QE+++L+ K   V+S+  E++EK+  K K  Y+   K
Sbjct: 110 LQATVQNIAQETEQLSNKLNNVASDEAELDEKIERK-KREYEQLQK 154


>AF038606-3|AAX55701.1|  393|Caenorhabditis elegans Hypothetical
           protein C04C3.5c protein.
          Length = 393

 Score = 32.3 bits (70), Expect = 0.47
 Identities = 19/46 (41%), Positives = 29/46 (63%), Gaps = 3/46 (6%)
 Frame = +2

Query: 494 LQAAVQNTVQESQKLAKK---VSSNVQEINEKLAPKIKAAYDDFAK 622
           LQA VQN  QE+++L+ K   V+S+  E++EK+  K K  Y+   K
Sbjct: 172 LQATVQNIAQETEQLSNKLNNVASDEAELDEKIERK-KREYEQLQK 216


>AF038606-2|AAX55700.1|  404|Caenorhabditis elegans Hypothetical
           protein C04C3.5b protein.
          Length = 404

 Score = 32.3 bits (70), Expect = 0.47
 Identities = 19/46 (41%), Positives = 29/46 (63%), Gaps = 3/46 (6%)
 Frame = +2

Query: 494 LQAAVQNTVQESQKLAKK---VSSNVQEINEKLAPKIKAAYDDFAK 622
           LQA VQN  QE+++L+ K   V+S+  E++EK+  K K  Y+   K
Sbjct: 183 LQATVQNIAQETEQLSNKLNNVASDEAELDEKIERK-KREYEQLQK 227


>AB182367-3|BAD23998.1|  331|Caenorhabditis elegans hypothetical
           protein protein.
          Length = 331

 Score = 32.3 bits (70), Expect = 0.47
 Identities = 19/46 (41%), Positives = 29/46 (63%), Gaps = 3/46 (6%)
 Frame = +2

Query: 494 LQAAVQNTVQESQKLAKK---VSSNVQEINEKLAPKIKAAYDDFAK 622
           LQA VQN  QE+++L+ K   V+S+  E++EK+  K K  Y+   K
Sbjct: 110 LQATVQNIAQETEQLSNKLNNVASDEAELDEKIERK-KREYEQLQK 154


>AB182367-2|BAD23997.1|  393|Caenorhabditis elegans hypothetical
           protein protein.
          Length = 393

 Score = 32.3 bits (70), Expect = 0.47
 Identities = 19/46 (41%), Positives = 29/46 (63%), Gaps = 3/46 (6%)
 Frame = +2

Query: 494 LQAAVQNTVQESQKLAKK---VSSNVQEINEKLAPKIKAAYDDFAK 622
           LQA VQN  QE+++L+ K   V+S+  E++EK+  K K  Y+   K
Sbjct: 172 LQATVQNIAQETEQLSNKLNNVASDEAELDEKIERK-KREYEQLQK 216


>AB182367-1|BAD23996.1|  404|Caenorhabditis elegans hypothetical
           protein protein.
          Length = 404

 Score = 32.3 bits (70), Expect = 0.47
 Identities = 19/46 (41%), Positives = 29/46 (63%), Gaps = 3/46 (6%)
 Frame = +2

Query: 494 LQAAVQNTVQESQKLAKK---VSSNVQEINEKLAPKIKAAYDDFAK 622
           LQA VQN  QE+++L+ K   V+S+  E++EK+  K K  Y+   K
Sbjct: 183 LQATVQNIAQETEQLSNKLNNVASDEAELDEKIERK-KREYEQLQK 227


>U00040-1|AAA50664.3| 1770|Caenorhabditis elegans Hypothetical
           protein C18H2.1 protein.
          Length = 1770

 Score = 31.9 bits (69), Expect = 0.62
 Identities = 24/80 (30%), Positives = 39/80 (48%)
 Frame = +2

Query: 41  DFDTLLCVAVRFASPPHSVSRQYIMAAKFVVLFACIALAQGAMVRRDAPDFFKDIEHHTK 220
           DF+ LL V  +F+   +  +  Y    K  V   C++  +   +  D  +F KDI+   K
Sbjct: 552 DFNKLLEVH-KFSKRFYEFTN-YFKNNKPKVFLECVSRLRKTAI--DGENFVKDIQKTYK 607

Query: 221 EFHKTLEQQFNSLTKSKDAQ 280
           + HKTLE   + + K +D Q
Sbjct: 608 KSHKTLESDSSPVLKLEDPQ 627


>Z27079-9|CAA81596.2|  660|Caenorhabditis elegans Hypothetical
           protein T05G5.9a protein.
          Length = 660

 Score = 29.9 bits (64), Expect = 2.5
 Identities = 20/62 (32%), Positives = 31/62 (50%)
 Frame = +2

Query: 461 VEKNATALREKLQAAVQNTVQESQKLAKKVSSNVQEINEKLAPKIKAAYDDFAKNTQEVI 640
           ++KN TAL EKL+A +    Q      KK + N++ INEKL  +     ++      E +
Sbjct: 46  MKKNQTALMEKLKAKMSELEQ-----VKKDAENLKLINEKLTTESAKKVENNPTECTECL 100

Query: 641 KK 646
            K
Sbjct: 101 SK 102


>Z27079-10|CAD90180.1|  658|Caenorhabditis elegans Hypothetical
           protein T05G5.9b protein.
          Length = 658

 Score = 29.5 bits (63), Expect = 3.3
 Identities = 18/41 (43%), Positives = 25/41 (60%)
 Frame = +2

Query: 461 VEKNATALREKLQAAVQNTVQESQKLAKKVSSNVQEINEKL 583
           ++KN TAL EKL+A +    Q      KK + N++ INEKL
Sbjct: 46  MKKNQTALMEKLKAKMSELEQ-----VKKDAENLKLINEKL 81


>Z81088-4|CAB03125.1|  105|Caenorhabditis elegans Hypothetical
           protein F53F1.4 protein.
          Length = 105

 Score = 28.3 bits (60), Expect = 7.6
 Identities = 10/22 (45%), Positives = 12/22 (54%)
 Frame = -3

Query: 454 GGPCGAPRPCARCSASTVPKPP 389
           GG CG P PC   + + V  PP
Sbjct: 65  GGGCGGPAPCGGAAPAYVAPPP 86


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,302,052
Number of Sequences: 27780
Number of extensions: 219642
Number of successful extensions: 1044
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 997
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1043
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2202903780
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)