BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP26_F_J18
(913 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC119661-1|AAI19662.2| 313|Homo sapiens CRYL1 protein protein. 141 3e-33
BC119660-1|AAI19661.2| 313|Homo sapiens CRYL1 protein protein. 141 3e-33
BC008562-1|AAH08562.2| 306|Homo sapiens CRYL1 protein protein. 141 3e-33
AL590096-2|CAI14389.1| 319|Homo sapiens crystallin, lambda 1 pr... 141 3e-33
AL161715-2|CAH71074.1| 319|Homo sapiens crystallin, lambda 1 pr... 141 3e-33
AF087898-1|AAP97197.1| 319|Homo sapiens lambda-crystallin protein. 141 3e-33
BC071810-1|AAH71810.1| 297|Homo sapiens CRYL1 protein protein. 136 1e-31
AL590096-1|CAI14388.1| 297|Homo sapiens crystallin, lambda 1 pr... 136 1e-31
AL161715-1|CAH71073.1| 297|Homo sapiens crystallin, lambda 1 pr... 136 1e-31
AF160216-1|AAF67017.1| 297|Homo sapiens lambda-crystallin protein. 136 1e-31
X96752-1|CAA65528.1| 314|Homo sapiens 3-hydroxyacyl-CoA dehydro... 35 0.47
BC000306-1|AAH00306.1| 314|Homo sapiens hydroxyacyl-Coenzyme A ... 35 0.47
AF095703-1|AAD13581.1| 314|Homo sapiens short chain L-3-hydroxy... 35 0.47
AF001903-1|AAB54009.1| 390|Homo sapiens 3-hydroxyacyl-CoA dehyd... 35 0.47
AF001902-1|AAB54008.1| 308|Homo sapiens 3-hydroxyacyl-CoA dehyd... 35 0.47
BC112891-1|AAI12892.1| 1887|Homo sapiens ASCC3L1 protein protein. 31 7.7
BC065924-1|AAH65924.1| 1821|Homo sapiens ASCC3L1 protein protein. 31 7.7
AY572488-1|AAS78571.1| 2136|Homo sapiens 200 kDa U5 snRNP-specif... 31 7.7
AK090671-1|BAC03499.1| 625|Homo sapiens protein ( Homo sapiens ... 31 7.7
AK024391-1|BAB14906.1| 1811|Homo sapiens protein ( Homo sapiens ... 31 7.7
AK023840-1|BAB14698.1| 774|Homo sapiens protein ( Homo sapiens ... 31 7.7
AB018331-1|BAA34508.2| 2026|Homo sapiens KIAA0788 protein protein. 31 7.7
>BC119661-1|AAI19662.2| 313|Homo sapiens CRYL1 protein protein.
Length = 313
Score = 141 bits (342), Expect = 3e-33
Identities = 64/135 (47%), Positives = 88/135 (65%)
Frame = +2
Query: 161 WAXLFASVGYQVTVYDVVAKQITDAIEDIKYQLHTLENDGLLRGELKASEQFQCIKGSTD 340
WA LFAS G+QV +YD+ +QI +A+E+I+ ++ LE G L+G L EQ I G +
Sbjct: 15 WAMLFASGGFQVKLYDIEQQQIRNALENIRKEMKLLEQAGSLKGSLSVEEQLSLISGCPN 74
Query: 341 LETAVKGAIFVQECVPENLDLKKKVFQNLDSVVDDNTIXXXXXXXXXXXXXXEGLKHKSQ 520
++ AV+GA+ +QECVPE+L+LKKK+F LDS++DD I GL H Q
Sbjct: 75 IQEAVEGAMHIQECVPEDLELKKKIFAQLDSIIDDRVILSSSTSCLMPSKLFAGLVHVKQ 134
Query: 521 VIVSHPVNPPYYVPL 565
IV+HPVNPPYY+PL
Sbjct: 135 CIVAHPVNPPYYIPL 149
Score = 76.6 bits (180), Expect = 1e-13
Identities = 37/68 (54%), Positives = 40/68 (58%)
Frame = +1
Query: 709 LNEVWRLXXXXXXXXXXXXXXMSEGLGMRYAFLGALETAHLNAEGMQSYIDRYGETIYRV 888
++E WRL MSEGLGMRYAF+G LET HLNAEGM SY DRY E I V
Sbjct: 197 ISEAWRLVEEGIVSPSDLDLVMSEGLGMRYAFIGPLETMHLNAEGMLSYCDRYSEGIKHV 256
Query: 889 SNEMGPAP 912
GP P
Sbjct: 257 LQTFGPIP 264
Score = 60.9 bits (141), Expect = 6e-09
Identities = 26/50 (52%), Positives = 37/50 (74%)
Frame = +3
Query: 561 PLVEIVPAPWTKPEVAKKTREIMEEIGQQPVSLTREIDGFVLNRIQYAIL 710
PLVE+VP P T P +T +M++IGQ P+ + +E+ GFVLNR+QYAI+
Sbjct: 148 PLVELVPHPETAPTTVDRTHALMKKIGQCPMRVQKEVAGFVLNRLQYAII 197
>BC119660-1|AAI19661.2| 313|Homo sapiens CRYL1 protein protein.
Length = 313
Score = 141 bits (342), Expect = 3e-33
Identities = 64/135 (47%), Positives = 88/135 (65%)
Frame = +2
Query: 161 WAXLFASVGYQVTVYDVVAKQITDAIEDIKYQLHTLENDGLLRGELKASEQFQCIKGSTD 340
WA LFAS G+QV +YD+ +QI +A+E+I+ ++ LE G L+G L EQ I G +
Sbjct: 15 WAMLFASGGFQVKLYDIEQQQIRNALENIRKEMKLLEQAGSLKGSLSVEEQLSLISGCPN 74
Query: 341 LETAVKGAIFVQECVPENLDLKKKVFQNLDSVVDDNTIXXXXXXXXXXXXXXEGLKHKSQ 520
++ AV+GA+ +QECVPE+L+LKKK+F LDS++DD I GL H Q
Sbjct: 75 IQEAVEGAMHIQECVPEDLELKKKIFAQLDSIIDDRVILSSSTSCLMPSKLFAGLVHVKQ 134
Query: 521 VIVSHPVNPPYYVPL 565
IV+HPVNPPYY+PL
Sbjct: 135 CIVAHPVNPPYYIPL 149
Score = 76.6 bits (180), Expect = 1e-13
Identities = 37/68 (54%), Positives = 40/68 (58%)
Frame = +1
Query: 709 LNEVWRLXXXXXXXXXXXXXXMSEGLGMRYAFLGALETAHLNAEGMQSYIDRYGETIYRV 888
++E WRL MSEGLGMRYAF+G LET HLNAEGM SY DRY E I V
Sbjct: 197 ISEAWRLVEEGIVSPSDLDLVMSEGLGMRYAFIGPLETMHLNAEGMLSYCDRYSEGIKHV 256
Query: 889 SNEMGPAP 912
GP P
Sbjct: 257 LQTFGPIP 264
Score = 60.9 bits (141), Expect = 6e-09
Identities = 26/50 (52%), Positives = 37/50 (74%)
Frame = +3
Query: 561 PLVEIVPAPWTKPEVAKKTREIMEEIGQQPVSLTREIDGFVLNRIQYAIL 710
PLVE+VP P T P +T +M++IGQ P+ + +E+ GFVLNR+QYAI+
Sbjct: 148 PLVELVPHPETAPTTVDRTHALMKKIGQCPMRVQKEVAGFVLNRLQYAII 197
>BC008562-1|AAH08562.2| 306|Homo sapiens CRYL1 protein protein.
Length = 306
Score = 141 bits (342), Expect = 3e-33
Identities = 64/135 (47%), Positives = 88/135 (65%)
Frame = +2
Query: 161 WAXLFASVGYQVTVYDVVAKQITDAIEDIKYQLHTLENDGLLRGELKASEQFQCIKGSTD 340
WA LFAS G+QV +YD+ +QI +A+E+I+ ++ LE G L+G L EQ I G +
Sbjct: 8 WAMLFASGGFQVKLYDIEQQQIRNALENIRKEMKLLEQAGSLKGSLSVEEQLSLISGCPN 67
Query: 341 LETAVKGAIFVQECVPENLDLKKKVFQNLDSVVDDNTIXXXXXXXXXXXXXXEGLKHKSQ 520
++ AV+GA+ +QECVPE+L+LKKK+F LDS++DD I GL H Q
Sbjct: 68 IQEAVEGAMHIQECVPEDLELKKKIFAQLDSIIDDRVILSSSTSCLMPSKLFAGLVHVKQ 127
Query: 521 VIVSHPVNPPYYVPL 565
IV+HPVNPPYY+PL
Sbjct: 128 CIVAHPVNPPYYIPL 142
Score = 76.6 bits (180), Expect = 1e-13
Identities = 37/68 (54%), Positives = 40/68 (58%)
Frame = +1
Query: 709 LNEVWRLXXXXXXXXXXXXXXMSEGLGMRYAFLGALETAHLNAEGMQSYIDRYGETIYRV 888
++E WRL MSEGLGMRYAF+G LET HLNAEGM SY DRY E I V
Sbjct: 190 ISEAWRLVEEGIVSPSDLDLVMSEGLGMRYAFIGPLETMHLNAEGMLSYCDRYSEGIKHV 249
Query: 889 SNEMGPAP 912
GP P
Sbjct: 250 LQTFGPIP 257
Score = 60.9 bits (141), Expect = 6e-09
Identities = 26/50 (52%), Positives = 37/50 (74%)
Frame = +3
Query: 561 PLVEIVPAPWTKPEVAKKTREIMEEIGQQPVSLTREIDGFVLNRIQYAIL 710
PLVE+VP P T P +T +M++IGQ P+ + +E+ GFVLNR+QYAI+
Sbjct: 141 PLVELVPHPETAPTTVDRTHALMKKIGQCPMRVQKEVAGFVLNRLQYAII 190
>AL590096-2|CAI14389.1| 319|Homo sapiens crystallin, lambda 1
protein.
Length = 319
Score = 141 bits (342), Expect = 3e-33
Identities = 64/135 (47%), Positives = 88/135 (65%)
Frame = +2
Query: 161 WAXLFASVGYQVTVYDVVAKQITDAIEDIKYQLHTLENDGLLRGELKASEQFQCIKGSTD 340
WA LFAS G+QV +YD+ +QI +A+E+I+ ++ LE G L+G L EQ I G +
Sbjct: 21 WAMLFASGGFQVKLYDIEQQQIRNALENIRKEMKLLEQAGSLKGSLSVEEQLSLISGCPN 80
Query: 341 LETAVKGAIFVQECVPENLDLKKKVFQNLDSVVDDNTIXXXXXXXXXXXXXXEGLKHKSQ 520
++ AV+GA+ +QECVPE+L+LKKK+F LDS++DD I GL H Q
Sbjct: 81 IQEAVEGAMHIQECVPEDLELKKKIFAQLDSIIDDRVILSSSTSCLMPSKLFAGLVHVKQ 140
Query: 521 VIVSHPVNPPYYVPL 565
IV+HPVNPPYY+PL
Sbjct: 141 CIVAHPVNPPYYIPL 155
Score = 76.6 bits (180), Expect = 1e-13
Identities = 37/68 (54%), Positives = 40/68 (58%)
Frame = +1
Query: 709 LNEVWRLXXXXXXXXXXXXXXMSEGLGMRYAFLGALETAHLNAEGMQSYIDRYGETIYRV 888
++E WRL MSEGLGMRYAF+G LET HLNAEGM SY DRY E I V
Sbjct: 203 ISEAWRLVEEGIVSPSDLDLVMSEGLGMRYAFIGPLETMHLNAEGMLSYCDRYSEGIKHV 262
Query: 889 SNEMGPAP 912
GP P
Sbjct: 263 LQTFGPIP 270
Score = 60.9 bits (141), Expect = 6e-09
Identities = 26/50 (52%), Positives = 37/50 (74%)
Frame = +3
Query: 561 PLVEIVPAPWTKPEVAKKTREIMEEIGQQPVSLTREIDGFVLNRIQYAIL 710
PLVE+VP P T P +T +M++IGQ P+ + +E+ GFVLNR+QYAI+
Sbjct: 154 PLVELVPHPETAPTTVDRTHALMKKIGQCPMRVQKEVAGFVLNRLQYAII 203
>AL161715-2|CAH71074.1| 319|Homo sapiens crystallin, lambda 1
protein.
Length = 319
Score = 141 bits (342), Expect = 3e-33
Identities = 64/135 (47%), Positives = 88/135 (65%)
Frame = +2
Query: 161 WAXLFASVGYQVTVYDVVAKQITDAIEDIKYQLHTLENDGLLRGELKASEQFQCIKGSTD 340
WA LFAS G+QV +YD+ +QI +A+E+I+ ++ LE G L+G L EQ I G +
Sbjct: 21 WAMLFASGGFQVKLYDIEQQQIRNALENIRKEMKLLEQAGSLKGSLSVEEQLSLISGCPN 80
Query: 341 LETAVKGAIFVQECVPENLDLKKKVFQNLDSVVDDNTIXXXXXXXXXXXXXXEGLKHKSQ 520
++ AV+GA+ +QECVPE+L+LKKK+F LDS++DD I GL H Q
Sbjct: 81 IQEAVEGAMHIQECVPEDLELKKKIFAQLDSIIDDRVILSSSTSCLMPSKLFAGLVHVKQ 140
Query: 521 VIVSHPVNPPYYVPL 565
IV+HPVNPPYY+PL
Sbjct: 141 CIVAHPVNPPYYIPL 155
Score = 76.6 bits (180), Expect = 1e-13
Identities = 37/68 (54%), Positives = 40/68 (58%)
Frame = +1
Query: 709 LNEVWRLXXXXXXXXXXXXXXMSEGLGMRYAFLGALETAHLNAEGMQSYIDRYGETIYRV 888
++E WRL MSEGLGMRYAF+G LET HLNAEGM SY DRY E I V
Sbjct: 203 ISEAWRLVEEGIVSPSDLDLVMSEGLGMRYAFIGPLETMHLNAEGMLSYCDRYSEGIKHV 262
Query: 889 SNEMGPAP 912
GP P
Sbjct: 263 LQTFGPIP 270
Score = 60.9 bits (141), Expect = 6e-09
Identities = 26/50 (52%), Positives = 37/50 (74%)
Frame = +3
Query: 561 PLVEIVPAPWTKPEVAKKTREIMEEIGQQPVSLTREIDGFVLNRIQYAIL 710
PLVE+VP P T P +T +M++IGQ P+ + +E+ GFVLNR+QYAI+
Sbjct: 154 PLVELVPHPETAPTTVDRTHALMKKIGQCPMRVQKEVAGFVLNRLQYAII 203
>AF087898-1|AAP97197.1| 319|Homo sapiens lambda-crystallin protein.
Length = 319
Score = 141 bits (342), Expect = 3e-33
Identities = 64/135 (47%), Positives = 88/135 (65%)
Frame = +2
Query: 161 WAXLFASVGYQVTVYDVVAKQITDAIEDIKYQLHTLENDGLLRGELKASEQFQCIKGSTD 340
WA LFAS G+QV +YD+ +QI +A+E+I+ ++ LE G L+G L EQ I G +
Sbjct: 21 WAMLFASGGFQVKLYDIEQQQIRNALENIRKEMKLLEQAGSLKGSLSVEEQLSLISGCPN 80
Query: 341 LETAVKGAIFVQECVPENLDLKKKVFQNLDSVVDDNTIXXXXXXXXXXXXXXEGLKHKSQ 520
++ AV+GA+ +QECVPE+L+LKKK+F LDS++DD I GL H Q
Sbjct: 81 IQEAVEGAMHIQECVPEDLELKKKIFAQLDSIIDDRVILSSSTSCLMPSKLFAGLVHVKQ 140
Query: 521 VIVSHPVNPPYYVPL 565
IV+HPVNPPYY+PL
Sbjct: 141 CIVAHPVNPPYYIPL 155
Score = 76.6 bits (180), Expect = 1e-13
Identities = 37/68 (54%), Positives = 40/68 (58%)
Frame = +1
Query: 709 LNEVWRLXXXXXXXXXXXXXXMSEGLGMRYAFLGALETAHLNAEGMQSYIDRYGETIYRV 888
++E WRL MSEGLGMRYAF+G LET HLNAEGM SY DRY E I V
Sbjct: 203 ISEAWRLVEEGIVSPSDLDLVMSEGLGMRYAFIGPLETMHLNAEGMLSYCDRYSEGIKHV 262
Query: 889 SNEMGPAP 912
GP P
Sbjct: 263 LQTFGPIP 270
Score = 60.9 bits (141), Expect = 6e-09
Identities = 26/50 (52%), Positives = 37/50 (74%)
Frame = +3
Query: 561 PLVEIVPAPWTKPEVAKKTREIMEEIGQQPVSLTREIDGFVLNRIQYAIL 710
PLVE+VP P T P +T +M++IGQ P+ + +E+ GFVLNR+QYAI+
Sbjct: 154 PLVELVPHPETAPTTVDRTHALMKKIGQCPMRVQKEVAGFVLNRLQYAII 203
>BC071810-1|AAH71810.1| 297|Homo sapiens CRYL1 protein protein.
Length = 297
Score = 136 bits (328), Expect = 1e-31
Identities = 62/132 (46%), Positives = 86/132 (65%)
Frame = +2
Query: 170 LFASVGYQVTVYDVVAKQITDAIEDIKYQLHTLENDGLLRGELKASEQFQCIKGSTDLET 349
LFAS G+QV +YD+ +QI +A+E+I+ ++ LE G L+G L EQ I G +++
Sbjct: 2 LFASGGFQVKLYDIEQQQIRNALENIRKEMKLLEQAGSLKGSLSVEEQLSLISGCPNIQE 61
Query: 350 AVKGAIFVQECVPENLDLKKKVFQNLDSVVDDNTIXXXXXXXXXXXXXXEGLKHKSQVIV 529
AV+GA+ +QECVPE+L+LKKK+F LDS++DD I GL H Q IV
Sbjct: 62 AVEGAMHIQECVPEDLELKKKIFAQLDSIIDDRVILSSSTSCLMPSKLFAGLVHVKQCIV 121
Query: 530 SHPVNPPYYVPL 565
+HPVNPPYY+PL
Sbjct: 122 AHPVNPPYYIPL 133
Score = 76.6 bits (180), Expect = 1e-13
Identities = 37/68 (54%), Positives = 40/68 (58%)
Frame = +1
Query: 709 LNEVWRLXXXXXXXXXXXXXXMSEGLGMRYAFLGALETAHLNAEGMQSYIDRYGETIYRV 888
++E WRL MSEGLGMRYAF+G LET HLNAEGM SY DRY E I V
Sbjct: 181 ISEAWRLVEEGIVSPSDLDLVMSEGLGMRYAFIGPLETMHLNAEGMLSYCDRYSEGIKHV 240
Query: 889 SNEMGPAP 912
GP P
Sbjct: 241 LQTFGPIP 248
Score = 60.9 bits (141), Expect = 6e-09
Identities = 26/50 (52%), Positives = 37/50 (74%)
Frame = +3
Query: 561 PLVEIVPAPWTKPEVAKKTREIMEEIGQQPVSLTREIDGFVLNRIQYAIL 710
PLVE+VP P T P +T +M++IGQ P+ + +E+ GFVLNR+QYAI+
Sbjct: 132 PLVELVPHPETAPTTVDRTHALMKKIGQCPMRVQKEVAGFVLNRLQYAII 181
>AL590096-1|CAI14388.1| 297|Homo sapiens crystallin, lambda 1
protein.
Length = 297
Score = 136 bits (328), Expect = 1e-31
Identities = 62/132 (46%), Positives = 86/132 (65%)
Frame = +2
Query: 170 LFASVGYQVTVYDVVAKQITDAIEDIKYQLHTLENDGLLRGELKASEQFQCIKGSTDLET 349
LFAS G+QV +YD+ +QI +A+E+I+ ++ LE G L+G L EQ I G +++
Sbjct: 2 LFASGGFQVKLYDIEQQQIRNALENIRKEMKLLEQAGSLKGSLSVEEQLSLISGCPNIQE 61
Query: 350 AVKGAIFVQECVPENLDLKKKVFQNLDSVVDDNTIXXXXXXXXXXXXXXEGLKHKSQVIV 529
AV+GA+ +QECVPE+L+LKKK+F LDS++DD I GL H Q IV
Sbjct: 62 AVEGAMHIQECVPEDLELKKKIFAQLDSIIDDRVILSSSTSCLMPSKLFAGLVHVKQCIV 121
Query: 530 SHPVNPPYYVPL 565
+HPVNPPYY+PL
Sbjct: 122 AHPVNPPYYIPL 133
Score = 76.6 bits (180), Expect = 1e-13
Identities = 37/68 (54%), Positives = 40/68 (58%)
Frame = +1
Query: 709 LNEVWRLXXXXXXXXXXXXXXMSEGLGMRYAFLGALETAHLNAEGMQSYIDRYGETIYRV 888
++E WRL MSEGLGMRYAF+G LET HLNAEGM SY DRY E I V
Sbjct: 181 ISEAWRLVEEGIVSPSDLDLVMSEGLGMRYAFIGPLETMHLNAEGMLSYCDRYSEGIKHV 240
Query: 889 SNEMGPAP 912
GP P
Sbjct: 241 LQTFGPIP 248
Score = 60.9 bits (141), Expect = 6e-09
Identities = 26/50 (52%), Positives = 37/50 (74%)
Frame = +3
Query: 561 PLVEIVPAPWTKPEVAKKTREIMEEIGQQPVSLTREIDGFVLNRIQYAIL 710
PLVE+VP P T P +T +M++IGQ P+ + +E+ GFVLNR+QYAI+
Sbjct: 132 PLVELVPHPETAPTTVDRTHALMKKIGQCPMRVQKEVAGFVLNRLQYAII 181
>AL161715-1|CAH71073.1| 297|Homo sapiens crystallin, lambda 1
protein.
Length = 297
Score = 136 bits (328), Expect = 1e-31
Identities = 62/132 (46%), Positives = 86/132 (65%)
Frame = +2
Query: 170 LFASVGYQVTVYDVVAKQITDAIEDIKYQLHTLENDGLLRGELKASEQFQCIKGSTDLET 349
LFAS G+QV +YD+ +QI +A+E+I+ ++ LE G L+G L EQ I G +++
Sbjct: 2 LFASGGFQVKLYDIEQQQIRNALENIRKEMKLLEQAGSLKGSLSVEEQLSLISGCPNIQE 61
Query: 350 AVKGAIFVQECVPENLDLKKKVFQNLDSVVDDNTIXXXXXXXXXXXXXXEGLKHKSQVIV 529
AV+GA+ +QECVPE+L+LKKK+F LDS++DD I GL H Q IV
Sbjct: 62 AVEGAMHIQECVPEDLELKKKIFAQLDSIIDDRVILSSSTSCLMPSKLFAGLVHVKQCIV 121
Query: 530 SHPVNPPYYVPL 565
+HPVNPPYY+PL
Sbjct: 122 AHPVNPPYYIPL 133
Score = 76.6 bits (180), Expect = 1e-13
Identities = 37/68 (54%), Positives = 40/68 (58%)
Frame = +1
Query: 709 LNEVWRLXXXXXXXXXXXXXXMSEGLGMRYAFLGALETAHLNAEGMQSYIDRYGETIYRV 888
++E WRL MSEGLGMRYAF+G LET HLNAEGM SY DRY E I V
Sbjct: 181 ISEAWRLVEEGIVSPSDLDLVMSEGLGMRYAFIGPLETMHLNAEGMLSYCDRYSEGIKHV 240
Query: 889 SNEMGPAP 912
GP P
Sbjct: 241 LQTFGPIP 248
Score = 60.9 bits (141), Expect = 6e-09
Identities = 26/50 (52%), Positives = 37/50 (74%)
Frame = +3
Query: 561 PLVEIVPAPWTKPEVAKKTREIMEEIGQQPVSLTREIDGFVLNRIQYAIL 710
PLVE+VP P T P +T +M++IGQ P+ + +E+ GFVLNR+QYAI+
Sbjct: 132 PLVELVPHPETAPTTVDRTHALMKKIGQCPMRVQKEVAGFVLNRLQYAII 181
>AF160216-1|AAF67017.1| 297|Homo sapiens lambda-crystallin protein.
Length = 297
Score = 136 bits (328), Expect = 1e-31
Identities = 62/132 (46%), Positives = 86/132 (65%)
Frame = +2
Query: 170 LFASVGYQVTVYDVVAKQITDAIEDIKYQLHTLENDGLLRGELKASEQFQCIKGSTDLET 349
LFAS G+QV +YD+ +QI +A+E+I+ ++ LE G L+G L EQ I G +++
Sbjct: 2 LFASGGFQVKLYDIEQQQIRNALENIRKEMKLLEQAGSLKGSLSVEEQLSLISGCPNIQE 61
Query: 350 AVKGAIFVQECVPENLDLKKKVFQNLDSVVDDNTIXXXXXXXXXXXXXXEGLKHKSQVIV 529
AV+GA+ +QECVPE+L+LKKK+F LDS++DD I GL H Q IV
Sbjct: 62 AVEGAMHIQECVPEDLELKKKIFAQLDSIIDDRVILSSSTSCLMPSKLFAGLVHVKQCIV 121
Query: 530 SHPVNPPYYVPL 565
+HPVNPPYY+PL
Sbjct: 122 AHPVNPPYYIPL 133
Score = 76.6 bits (180), Expect = 1e-13
Identities = 37/68 (54%), Positives = 40/68 (58%)
Frame = +1
Query: 709 LNEVWRLXXXXXXXXXXXXXXMSEGLGMRYAFLGALETAHLNAEGMQSYIDRYGETIYRV 888
++E WRL MSEGLGMRYAF+G LET HLNAEGM SY DRY E I V
Sbjct: 181 ISEAWRLVEEGIVSPSDLDLVMSEGLGMRYAFIGPLETMHLNAEGMLSYCDRYSEGIKHV 240
Query: 889 SNEMGPAP 912
GP P
Sbjct: 241 LQTFGPIP 248
Score = 60.9 bits (141), Expect = 6e-09
Identities = 26/50 (52%), Positives = 37/50 (74%)
Frame = +3
Query: 561 PLVEIVPAPWTKPEVAKKTREIMEEIGQQPVSLTREIDGFVLNRIQYAIL 710
PLVE+VP P T P +T +M++IGQ P+ + +E+ GFVLNR+QYAI+
Sbjct: 132 PLVELVPHPETAPTTVDRTHALMKKIGQCPMRVQKEVAGFVLNRLQYAII 181
>X96752-1|CAA65528.1| 314|Homo sapiens 3-hydroxyacyl-CoA
dehydrogenase protein.
Length = 314
Score = 34.7 bits (76), Expect = 0.47
Identities = 26/102 (25%), Positives = 45/102 (44%), Gaps = 5/102 (4%)
Frame = +2
Query: 164 AXLFASVGYQVTVYDVVAKQITDAIEDIKYQLHTLENDGLLRGELKASEQF-----QCIK 328
A + A+ G+ V + D + + + I+ L + KA ++F I
Sbjct: 43 AQVAAATGHTVVLVDQTEDILAKSKKGIEESLRKVAKKKFAENP-KAGDEFVEKTLSTIA 101
Query: 329 GSTDLETAVKGAIFVQECVPENLDLKKKVFQNLDSVVDDNTI 454
STD + V V E + ENL +K ++F+ LD ++TI
Sbjct: 102 TSTDAASVVHSTDLVVEAIVENLKVKNELFKRLDKFAAEHTI 143
Score = 31.5 bits (68), Expect = 4.4
Identities = 13/44 (29%), Positives = 26/44 (59%)
Frame = +3
Query: 564 LVEIVPAPWTKPEVAKKTREIMEEIGQQPVSLTREIDGFVLNRI 695
LVE++ P T + + + + +G+ PVS ++ GF++NR+
Sbjct: 180 LVEVIKTPMTSQKTFESLVDFSKALGKHPVS-CKDTPGFIVNRL 222
>BC000306-1|AAH00306.1| 314|Homo sapiens hydroxyacyl-Coenzyme A
dehydrogenase protein.
Length = 314
Score = 34.7 bits (76), Expect = 0.47
Identities = 26/102 (25%), Positives = 45/102 (44%), Gaps = 5/102 (4%)
Frame = +2
Query: 164 AXLFASVGYQVTVYDVVAKQITDAIEDIKYQLHTLENDGLLRGELKASEQF-----QCIK 328
A + A+ G+ V + D + + + I+ L + KA ++F I
Sbjct: 43 AQVAAATGHTVVLVDQTEDILAKSKKGIEESLRKVAKKKFAENP-KAGDEFVEKTLSTIA 101
Query: 329 GSTDLETAVKGAIFVQECVPENLDLKKKVFQNLDSVVDDNTI 454
STD + V V E + ENL +K ++F+ LD ++TI
Sbjct: 102 TSTDAASVVHSTDLVVEAIVENLKVKNELFKRLDKFAAEHTI 143
Score = 31.5 bits (68), Expect = 4.4
Identities = 13/44 (29%), Positives = 26/44 (59%)
Frame = +3
Query: 564 LVEIVPAPWTKPEVAKKTREIMEEIGQQPVSLTREIDGFVLNRI 695
LVE++ P T + + + + +G+ PVS ++ GF++NR+
Sbjct: 180 LVEVIKTPMTSQKTFESLVDFSKALGKHPVS-CKDTPGFIVNRL 222
>AF095703-1|AAD13581.1| 314|Homo sapiens short chain
L-3-hydroxyacyl-CoA dehydrogenase precursor protein.
Length = 314
Score = 34.7 bits (76), Expect = 0.47
Identities = 26/102 (25%), Positives = 45/102 (44%), Gaps = 5/102 (4%)
Frame = +2
Query: 164 AXLFASVGYQVTVYDVVAKQITDAIEDIKYQLHTLENDGLLRGELKASEQF-----QCIK 328
A + A+ G+ V + D + + + I+ L + KA ++F I
Sbjct: 43 AQVAAATGHTVVLVDQTEDILAKSKKGIEESLRKVAKKKFAENP-KAGDEFVEKTLSTIA 101
Query: 329 GSTDLETAVKGAIFVQECVPENLDLKKKVFQNLDSVVDDNTI 454
STD + V V E + ENL +K ++F+ LD ++TI
Sbjct: 102 TSTDAASVVHSTDLVVEAIVENLKVKNELFKRLDKFAAEHTI 143
Score = 31.5 bits (68), Expect = 4.4
Identities = 13/44 (29%), Positives = 26/44 (59%)
Frame = +3
Query: 564 LVEIVPAPWTKPEVAKKTREIMEEIGQQPVSLTREIDGFVLNRI 695
LVE++ P T + + + + +G+ PVS ++ GF++NR+
Sbjct: 180 LVEVIKTPMTSQKTFESLVDFSKALGKHPVS-CKDTPGFIVNRL 222
>AF001903-1|AAB54009.1| 390|Homo sapiens 3-hydroxyacyl-CoA
dehydrogenase, isoform 2 protein.
Length = 390
Score = 34.7 bits (76), Expect = 0.47
Identities = 26/102 (25%), Positives = 45/102 (44%), Gaps = 5/102 (4%)
Frame = +2
Query: 164 AXLFASVGYQVTVYDVVAKQITDAIEDIKYQLHTLENDGLLRGELKASEQF-----QCIK 328
A + A+ G+ V + D + + + I+ L + KA ++F I
Sbjct: 102 AQVAAATGHTVVLVDQTEDILAKSKKGIEESLRKVAKKKFAENP-KAGDEFVEKTLSTIA 160
Query: 329 GSTDLETAVKGAIFVQECVPENLDLKKKVFQNLDSVVDDNTI 454
STD + V V E + ENL +K ++F+ LD ++TI
Sbjct: 161 TSTDAASVVHSTDLVVEAIVENLKVKNELFKRLDKFAAEHTI 202
Score = 31.5 bits (68), Expect = 4.4
Identities = 13/44 (29%), Positives = 26/44 (59%)
Frame = +3
Query: 564 LVEIVPAPWTKPEVAKKTREIMEEIGQQPVSLTREIDGFVLNRI 695
LVE++ P T + + + + +G+ PVS ++ GF++NR+
Sbjct: 239 LVEVIKTPMTSQKTFESLVDFSKALGKHPVS-CKDTPGFIVNRL 281
>AF001902-1|AAB54008.1| 308|Homo sapiens 3-hydroxyacyl-CoA
dehydrogenase protein.
Length = 308
Score = 34.7 bits (76), Expect = 0.47
Identities = 26/102 (25%), Positives = 45/102 (44%), Gaps = 5/102 (4%)
Frame = +2
Query: 164 AXLFASVGYQVTVYDVVAKQITDAIEDIKYQLHTLENDGLLRGELKASEQF-----QCIK 328
A + A+ G+ V + D + + + I+ L + KA ++F I
Sbjct: 37 AQVAAATGHTVVLVDQTEDILAKSKKGIEESLRKVAKKKFAENP-KAGDEFVEKTLSTIA 95
Query: 329 GSTDLETAVKGAIFVQECVPENLDLKKKVFQNLDSVVDDNTI 454
STD + V V E + ENL +K ++F+ LD ++TI
Sbjct: 96 TSTDAASVVHSTDLVVEAIVENLKVKNELFKRLDKFAAEHTI 137
Score = 31.5 bits (68), Expect = 4.4
Identities = 13/44 (29%), Positives = 26/44 (59%)
Frame = +3
Query: 564 LVEIVPAPWTKPEVAKKTREIMEEIGQQPVSLTREIDGFVLNRI 695
LVE++ P T + + + + +G+ PVS ++ GF++NR+
Sbjct: 174 LVEVIKTPMTSQKTFESLVDFSKALGKHPVS-CKDTPGFIVNRL 216
>BC112891-1|AAI12892.1| 1887|Homo sapiens ASCC3L1 protein protein.
Length = 1887
Score = 30.7 bits (66), Expect = 7.7
Identities = 19/64 (29%), Positives = 29/64 (45%), Gaps = 1/64 (1%)
Frame = +2
Query: 161 WAXLFASVGYQVTVYDVVAKQITDA-IEDIKYQLHTLENDGLLRGELKASEQFQCIKGST 337
+ L AS + ++ K D + YQLH E + L+R E E+ + + T
Sbjct: 81 YCTLLASAQSEAEKERIMGKMEADPELSKFLYQLHETEKEDLIREERSRRERVRQSRMDT 140
Query: 338 DLET 349
DLET
Sbjct: 141 DLET 144
>BC065924-1|AAH65924.1| 1821|Homo sapiens ASCC3L1 protein protein.
Length = 1821
Score = 30.7 bits (66), Expect = 7.7
Identities = 19/64 (29%), Positives = 29/64 (45%), Gaps = 1/64 (1%)
Frame = +2
Query: 161 WAXLFASVGYQVTVYDVVAKQITDA-IEDIKYQLHTLENDGLLRGELKASEQFQCIKGST 337
+ L AS + ++ K D + YQLH E + L+R E E+ + + T
Sbjct: 15 YCTLLASAQSEAEKERIMGKMEADPELSKFLYQLHETEKEDLIREERSRRERVRQSRMDT 74
Query: 338 DLET 349
DLET
Sbjct: 75 DLET 78
>AY572488-1|AAS78571.1| 2136|Homo sapiens 200 kDa U5 snRNP-specific
spliceosomal protein protein.
Length = 2136
Score = 30.7 bits (66), Expect = 7.7
Identities = 19/64 (29%), Positives = 29/64 (45%), Gaps = 1/64 (1%)
Frame = +2
Query: 161 WAXLFASVGYQVTVYDVVAKQITDA-IEDIKYQLHTLENDGLLRGELKASEQFQCIKGST 337
+ L AS + ++ K D + YQLH E + L+R E E+ + + T
Sbjct: 330 YCTLLASAQSEAEKERIMGKMEADPELSKFLYQLHETEKEDLIREERSRRERVRQSRMDT 389
Query: 338 DLET 349
DLET
Sbjct: 390 DLET 393
>AK090671-1|BAC03499.1| 625|Homo sapiens protein ( Homo sapiens
cDNA FLJ33352 fis, clone BRACE2005087, weakly similar to
PRE-MRNA SPLICING HELICASE BRR2 (EC 3.6.1.-). ).
Length = 625
Score = 30.7 bits (66), Expect = 7.7
Identities = 19/64 (29%), Positives = 29/64 (45%), Gaps = 1/64 (1%)
Frame = +2
Query: 161 WAXLFASVGYQVTVYDVVAKQITDA-IEDIKYQLHTLENDGLLRGELKASEQFQCIKGST 337
+ L AS + ++ K D + YQLH E + L+R E E+ + + T
Sbjct: 330 YCTLLASAQSEAEKERIMGKMEADPELSKFLYQLHETEKEDLIREERSRRERVRQSRMDT 389
Query: 338 DLET 349
DLET
Sbjct: 390 DLET 393
>AK024391-1|BAB14906.1| 1811|Homo sapiens protein ( Homo sapiens
cDNA FLJ14329 fis, clone PLACE4000259, highly similar to
H.sapiens gene for U5 snRNP-specific 200kD protein. ).
Length = 1811
Score = 30.7 bits (66), Expect = 7.7
Identities = 19/64 (29%), Positives = 29/64 (45%), Gaps = 1/64 (1%)
Frame = +2
Query: 161 WAXLFASVGYQVTVYDVVAKQITDA-IEDIKYQLHTLENDGLLRGELKASEQFQCIKGST 337
+ L AS + ++ K D + YQLH E + L+R E E+ + + T
Sbjct: 5 YCTLLASAQSEAEKERIMGKMEADPELSKFLYQLHETEKEDLIREERSRRERVRQSRMDT 64
Query: 338 DLET 349
DLET
Sbjct: 65 DLET 68
>AK023840-1|BAB14698.1| 774|Homo sapiens protein ( Homo sapiens
cDNA FLJ13778 fis, clone PLACE4000431, highly similar to
H.sapiens gene for U5 snRNP-specific 200kD protein. ).
Length = 774
Score = 30.7 bits (66), Expect = 7.7
Identities = 19/64 (29%), Positives = 29/64 (45%), Gaps = 1/64 (1%)
Frame = +2
Query: 161 WAXLFASVGYQVTVYDVVAKQITDA-IEDIKYQLHTLENDGLLRGELKASEQFQCIKGST 337
+ L AS + ++ K D + YQLH E + L+R E E+ + + T
Sbjct: 5 YCTLLASAQSEAEKERIMGKMEADPELSKFLYQLHETEKEDLIREERSRRERVRQSRMDT 64
Query: 338 DLET 349
DLET
Sbjct: 65 DLET 68
>AB018331-1|BAA34508.2| 2026|Homo sapiens KIAA0788 protein protein.
Length = 2026
Score = 30.7 bits (66), Expect = 7.7
Identities = 19/64 (29%), Positives = 29/64 (45%), Gaps = 1/64 (1%)
Frame = +2
Query: 161 WAXLFASVGYQVTVYDVVAKQITDA-IEDIKYQLHTLENDGLLRGELKASEQFQCIKGST 337
+ L AS + ++ K D + YQLH E + L+R E E+ + + T
Sbjct: 220 YCTLLASAQSEAEKERIMGKMEADPELSKFLYQLHETEKEDLIREERSRRERVRQSRMDT 279
Query: 338 DLET 349
DLET
Sbjct: 280 DLET 283
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 122,351,910
Number of Sequences: 237096
Number of extensions: 2505897
Number of successful extensions: 4354
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 4196
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4342
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 11825849886
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -