Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP26_F_J16
         (855 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z83231-1|CAB05749.1|  357|Caenorhabditis elegans Hypothetical pr...    31   1.4  
Z69664-11|CAA93518.2| 1479|Caenorhabditis elegans Hypothetical p...    29   3.2  
AL022716-7|CAA18775.2| 1479|Caenorhabditis elegans Hypothetical ...    29   3.2  
AL021570-1|CAA16510.2| 1479|Caenorhabditis elegans Hypothetical ...    29   3.2  
AC006776-7|AAF60623.1|  361|Caenorhabditis elegans Serpentine re...    29   3.2  
Z82276-8|CAL69741.1|  281|Caenorhabditis elegans Hypothetical pr...    28   7.4  
Z79601-5|CAB01882.1|  450|Caenorhabditis elegans Hypothetical pr...    28   9.7  
AF067613-9|AAN73863.2|  326|Caenorhabditis elegans Serpentine re...    28   9.7  

>Z83231-1|CAB05749.1|  357|Caenorhabditis elegans Hypothetical
           protein F57G9.1 protein.
          Length = 357

 Score = 30.7 bits (66), Expect = 1.4
 Identities = 16/48 (33%), Positives = 25/48 (52%)
 Frame = +3

Query: 390 YIIYLPFNLKLMVIYVSILGLILGFMVRNMGIYSLNKLLLRYNLRSFL 533
           Y    P NLKL++    +L  IL   + N+ IY ++K+ L +    FL
Sbjct: 17  YFYNEPLNLKLVISIFELLSYILCGYILNLSIYVMSKIQLFHKNLMFL 64


>Z69664-11|CAA93518.2| 1479|Caenorhabditis elegans Hypothetical
            protein C24F3.5 protein.
          Length = 1479

 Score = 29.5 bits (63), Expect = 3.2
 Identities = 11/38 (28%), Positives = 21/38 (55%)
 Frame = +3

Query: 384  YPYIIYLPFNLKLMVIYVSILGLILGFMVRNMGIYSLN 497
            +P  +Y  F     ++   ++ +ILGF V +MG ++ N
Sbjct: 940  WPRYVYFGFIYVFQLVVFLVIAIILGFAVLSMGFFATN 977


>AL022716-7|CAA18775.2| 1479|Caenorhabditis elegans Hypothetical
            protein C24F3.5 protein.
          Length = 1479

 Score = 29.5 bits (63), Expect = 3.2
 Identities = 11/38 (28%), Positives = 21/38 (55%)
 Frame = +3

Query: 384  YPYIIYLPFNLKLMVIYVSILGLILGFMVRNMGIYSLN 497
            +P  +Y  F     ++   ++ +ILGF V +MG ++ N
Sbjct: 940  WPRYVYFGFIYVFQLVVFLVIAIILGFAVLSMGFFATN 977


>AL021570-1|CAA16510.2| 1479|Caenorhabditis elegans Hypothetical
            protein C24F3.5 protein.
          Length = 1479

 Score = 29.5 bits (63), Expect = 3.2
 Identities = 11/38 (28%), Positives = 21/38 (55%)
 Frame = +3

Query: 384  YPYIIYLPFNLKLMVIYVSILGLILGFMVRNMGIYSLN 497
            +P  +Y  F     ++   ++ +ILGF V +MG ++ N
Sbjct: 940  WPRYVYFGFIYVFQLVVFLVIAIILGFAVLSMGFFATN 977


>AC006776-7|AAF60623.1|  361|Caenorhabditis elegans Serpentine
           receptor, class w protein100 protein.
          Length = 361

 Score = 29.5 bits (63), Expect = 3.2
 Identities = 12/23 (52%), Positives = 17/23 (73%)
 Frame = +3

Query: 177 LIVFILFYLSTGLTVFYTFRLII 245
           L+  ILF+LS  L+VFY FR ++
Sbjct: 147 LMAVILFFLSALLSVFYQFRFVV 169


>Z82276-8|CAL69741.1|  281|Caenorhabditis elegans Hypothetical
           protein K03D3.14 protein.
          Length = 281

 Score = 28.3 bits (60), Expect = 7.4
 Identities = 25/83 (30%), Positives = 40/83 (48%), Gaps = 2/83 (2%)
 Frame = +3

Query: 384 YPYIIYLPFNLKLMVIYVSILGLILGFMVRNMGIYSLNKLLLRYNLRSFLCLI*FIPN-- 557
           Y Y IY PF         SILGL+ G ++  M I+S+   LL + +   +  + ++ +  
Sbjct: 144 YQYKIYNPF---------SILGLVYGIIIFCMAIFSVLSALLHFPIVKKIRALTYLDSTQ 194

Query: 558 LSTYGLSYIYLNFRQILFKNIDI 626
           LST      +L    ++FK I I
Sbjct: 195 LSTLYTYIFWLTIFIVVFKVIYI 217


>Z79601-5|CAB01882.1|  450|Caenorhabditis elegans Hypothetical
           protein K09A9.3 protein.
          Length = 450

 Score = 27.9 bits (59), Expect = 9.7
 Identities = 13/41 (31%), Positives = 22/41 (53%)
 Frame = +3

Query: 147 LEMVSFNSFNLIVFILFYLSTGLTVFYTFRLIIYVIINDFN 269
           L +V+      ++FI    ST LT F+T  +I  +++N  N
Sbjct: 126 LSIVAVCVITTMIFIYVETSTWLTGFFTLTIITIIVLNGAN 166


>AF067613-9|AAN73863.2|  326|Caenorhabditis elegans Serpentine
           receptor, class z protein20 protein.
          Length = 326

 Score = 27.9 bits (59), Expect = 9.7
 Identities = 14/58 (24%), Positives = 34/58 (58%), Gaps = 2/58 (3%)
 Frame = +3

Query: 111 PFLSGFYSKDLILEMVSFNSFNLIVFIL--FYLSTGLTVFYTFRLIIYVIINDFNLII 278
           PF++ FYS   +++++      +I+FI+  + L +   V  T  ++I+V+++   ++I
Sbjct: 62  PFVNHFYSVIRMVQIIFLCMCTVIIFIILAYTLRSTSLVILTLAVMIFVVLSGIFVLI 119


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,939,674
Number of Sequences: 27780
Number of extensions: 122280
Number of successful extensions: 384
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 376
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 384
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2129473654
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)