Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP26_F_J15
(886 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPCC188.04c |spc25||kinetochore protein Spc25|Schizosaccharomyce... 30 0.38
SPAC12B10.10 |||sequence orphan|Schizosaccharomyces pombe|chr 1|... 29 1.2
SPBC17D11.05 |tif32||translation initiation factor eIF3a|Schizos... 28 1.5
SPBC16E9.16c |||sequence orphan|Schizosaccharomyces pombe|chr 2|... 27 3.6
SPAC1F3.10c |oct1||mitochondrial intermediate peptidase Oct1 |Sc... 27 4.7
SPBC1A4.03c |top2|ptr11|DNA topoisomerase II|Schizosaccharomyces... 27 4.7
SPAC22F8.11 |plc1||phosphoinositide phospholipase C Plc1|Schizos... 27 4.7
SPAPB1A10.08 |||sequence orphan|Schizosaccharomyces pombe|chr 1|... 26 6.2
SPAC11E3.01c |swr1|SPAC2H10.03c|SNF2 family helicase Swr1|Schizo... 26 6.2
SPBC29A10.13 |atp7||F0-ATPase subunit D|Schizosaccharomyces pomb... 26 6.2
SPAC18B11.02c |||pseudouridylate synthase |Schizosaccharomyces p... 26 8.2
SPBC16A3.19 |||histone acetyltransferase complex subunit Eaf7 |S... 26 8.2
SPBC30D10.07c |||biotin-protein ligase |Schizosaccharomyces pomb... 26 8.2
>SPCC188.04c |spc25||kinetochore protein Spc25|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 238
Score = 30.3 bits (65), Expect = 0.38
Identities = 20/70 (28%), Positives = 37/70 (52%), Gaps = 3/70 (4%)
Frame = +3
Query: 363 LGDANGKAKEALEQSRQNIERTAEELRKAHPD---VEKNATALREKLQAAVQNTVQESQK 533
+ +A KA+++LEQ+ + E L K H + E+ + +EKL A ++ QK
Sbjct: 52 INEAQKKAEKSLEQTEARKQNFTELLEKEHEEQAITEQEIFSFQEKLDA----MLKRKQK 107
Query: 534 LAKKVSSXRA 563
L++++ RA
Sbjct: 108 LSEELDHYRA 117
>SPAC12B10.10 |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 419
Score = 28.7 bits (61), Expect = 1.2
Identities = 13/60 (21%), Positives = 28/60 (46%)
Frame = +3
Query: 381 KAKEALEQSRQNIERTAEELRKAHPDVEKNATALREKLQAAVQNTVQESQKLAKKVSSXR 560
KA + LE+ ++ E + EE+ H + T+ + + + +QE ++ K + R
Sbjct: 353 KACKDLEEVSKSYEESREEIEALHETFTEEVTSFQSTKRLKEEKIIQEKSRVDKMIDEYR 412
>SPBC17D11.05 |tif32||translation initiation factor
eIF3a|Schizosaccharomyces pombe|chr 2|||Manual
Length = 932
Score = 28.3 bits (60), Expect = 1.5
Identities = 20/72 (27%), Positives = 35/72 (48%), Gaps = 1/72 (1%)
Frame = +3
Query: 351 SRXALGDANGKAKEALEQSRQNIERTAEELRKAHPDVEKNATALREKLQAAVQNTVQE-S 527
+R A +AN + E E ++ IE R+A ++ E+ + Q +E S
Sbjct: 798 ARAAEEEANRELHEQEEAQKRAIEERTRAAREAKEREQREMAEKLERQRRIQQERDEEIS 857
Query: 528 QKLAKKVSSXRA 563
+KLA+K ++ RA
Sbjct: 858 RKLAEKAAARRA 869
>SPBC16E9.16c |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 642
Score = 27.1 bits (57), Expect = 3.6
Identities = 15/36 (41%), Positives = 22/36 (61%), Gaps = 1/36 (2%)
Frame = +3
Query: 384 AKEALEQSRQNIERTAEELRK-AHPDVEKNATALRE 488
A E +++ +IER+A K A + E+ ATALRE
Sbjct: 157 ASERAREAQSSIERSASLREKQAREEAERAATALRE 192
>SPAC1F3.10c |oct1||mitochondrial intermediate peptidase Oct1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 762
Score = 26.6 bits (56), Expect = 4.7
Identities = 12/31 (38%), Positives = 17/31 (54%)
Frame = -3
Query: 434 LGRALDVLPRLFQSLLGLAVRVSERXPGDSW 342
+G + L RLF SL GL ++ PG+ W
Sbjct: 410 VGTVIQGLSRLFSSLYGLRFVPADISPGEVW 440
>SPBC1A4.03c |top2|ptr11|DNA topoisomerase II|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 1485
Score = 26.6 bits (56), Expect = 4.7
Identities = 12/42 (28%), Positives = 19/42 (45%), Gaps = 2/42 (4%)
Frame = +2
Query: 179 DAPDFFKDIEHHTKEFHKTLEQ--QFNSLTKSKDAQDFSKAW 298
D +F D++ H K FH E+ + + +K D K W
Sbjct: 665 DMKSYFSDLDRHMKYFHAMQEKDAELIEMAFAKKKADVRKEW 706
>SPAC22F8.11 |plc1||phosphoinositide phospholipase C
Plc1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 899
Score = 26.6 bits (56), Expect = 4.7
Identities = 10/30 (33%), Positives = 18/30 (60%)
Frame = +2
Query: 173 RRDAPDFFKDIEHHTKEFHKTLEQQFNSLT 262
++ DFFK + ++ H TL ++ NSL+
Sbjct: 56 KKSEQDFFKMLSSRDRDAHSTLRKRSNSLS 85
>SPAPB1A10.08 |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 412
Score = 26.2 bits (55), Expect = 6.2
Identities = 19/64 (29%), Positives = 29/64 (45%)
Frame = +2
Query: 86 PHSVSRQYIMAAKFVVLFACIALAQGAMVRRDAPDFFKDIEHHTKEFHKTLEQQFNSLTK 265
P S S + A + L + V R F + +EH+ K+LE+Q + L +
Sbjct: 171 PSSSSCNLVNANSLDIYLNINNLKKSKSVPRLRGQFMEPVEHN-HPLSKSLEEQSSFLEQ 229
Query: 266 SKDA 277
SKDA
Sbjct: 230 SKDA 233
>SPAC11E3.01c |swr1|SPAC2H10.03c|SNF2 family helicase
Swr1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1288
Score = 26.2 bits (55), Expect = 6.2
Identities = 16/50 (32%), Positives = 24/50 (48%)
Frame = +3
Query: 381 KAKEALEQSRQNIERTAEELRKAHPDVEKNATALREKLQAAVQNTVQESQ 530
KAKE ++ R +RTA E+RK +E+ R + A Q + Q
Sbjct: 164 KAKEEDKRIRLLAKRTAWEIRKKWKVIEREVRRRRAERAAEAQRVAGKEQ 213
>SPBC29A10.13 |atp7||F0-ATPase subunit D|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 175
Score = 26.2 bits (55), Expect = 6.2
Identities = 10/24 (41%), Positives = 18/24 (75%)
Frame = +3
Query: 396 LEQSRQNIERTAEELRKAHPDVEK 467
+EQ+R E T E++++A P++EK
Sbjct: 126 IEQARPTEEITIEDMKQAVPEIEK 149
>SPAC18B11.02c |||pseudouridylate synthase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 394
Score = 25.8 bits (54), Expect = 8.2
Identities = 16/64 (25%), Positives = 34/64 (53%), Gaps = 1/64 (1%)
Frame = +2
Query: 143 CIALAQGAMVRRDAPDFFKDIEHHTKEFH-KTLEQQFNSLTKSKDAQDFSKAWKDGSESV 319
C + +G +RR P +++ I ++ KTL + FN+ + +++ + KA ++G V
Sbjct: 13 CEYVFKGDGLRRVPPYYYEYITFAKLRWYGKTLLEVFNTEFRDRESGYYEKAIRNGQVKV 72
Query: 320 LQQL 331
Q+
Sbjct: 73 NNQI 76
>SPBC16A3.19 |||histone acetyltransferase complex subunit Eaf7
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 272
Score = 25.8 bits (54), Expect = 8.2
Identities = 15/58 (25%), Positives = 33/58 (56%)
Frame = +3
Query: 381 KAKEALEQSRQNIERTAEELRKAHPDVEKNATALREKLQAAVQNTVQESQKLAKKVSS 554
K+++ LE S Q +E E + P+V++ +EK ++ V+ +E +K+++ + S
Sbjct: 132 KSEKPLETS-QKVEIETVETKPGEPEVKQETNLQKEKKESKVKLESKE-EKISRNLRS 187
>SPBC30D10.07c |||biotin-protein ligase |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 631
Score = 25.8 bits (54), Expect = 8.2
Identities = 12/41 (29%), Positives = 22/41 (53%)
Frame = -2
Query: 411 ASTVPKPPWPCRSRLRALPWRLLAKALSCCSTDSEPSFQAL 289
AST+ K PWP + L +P + + CS+ +E ++ +
Sbjct: 38 ASTLEKEPWPASTALLVMPG---GRDMGYCSSFNETIYRKI 75
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,660,372
Number of Sequences: 5004
Number of extensions: 41899
Number of successful extensions: 165
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 158
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 164
length of database: 2,362,478
effective HSP length: 72
effective length of database: 2,002,190
effective search space used: 444486180
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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