Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP26_F_J15
         (886 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

05_03_0415 - 13661745-13664240,13664376-13664401,13665018-136650...    32   0.70 
02_01_0075 - 522554-522616,522742-522748,523033-523136,523237-52...    32   0.70 
04_01_0180 + 2034021-2034023,2034741-2035088                           31   1.6  
02_05_0471 - 29306334-29306398,29306579-29306775,29307744-29309665     30   2.8  
02_02_0331 + 9017291-9019084,9019205-9019402,9020014-9020184,902...    30   2.8  
02_04_0315 - 21969416-21970756                                         29   3.8  
08_02_0776 - 21083181-21083187,21083256-21083683,21083800-210840...    29   6.6  
07_03_0358 - 17177253-17177369,17177635-17177931,17178961-171790...    29   6.6  
03_02_0984 + 12947444-12947530,12949071-12949127,12949833-129499...    29   6.6  
06_01_0916 + 7058991-7059050,7060057-7061235,7061778-7063481,706...    28   8.7  
03_05_0512 + 25069175-25070533,25072177-25072226,25072308-25072401     28   8.7  
01_01_0933 - 7368672-7368785,7368860-7368895,7369581-7369715,736...    28   8.7  

>05_03_0415 -
           13661745-13664240,13664376-13664401,13665018-13665035,
           13665914-13666181,13666531-13666598,13667102-13667243
          Length = 1005

 Score = 31.9 bits (69), Expect = 0.70
 Identities = 21/53 (39%), Positives = 28/53 (52%)
 Frame = -2

Query: 429 PCARCSASTVPKPPWPCRSRLRALPWRLLAKALSCCSTDSEPSFQALLKSCAS 271
           P  R SA T+    WP    L A+ +R L  AL+CC + S PS    L++C S
Sbjct: 99  PGLRASAPTLR---WPFPRLLDAIAFRPLPCALACCGS-SAPSVVRHLRACGS 147


>02_01_0075 -
           522554-522616,522742-522748,523033-523136,523237-523368,
           525209-525401,525978-526330,526693-526791,526864-526935,
           527062-527213,527338-527386,527755-527885,528067-528307,
           528392-528565,528656-528797,529236-529282,529370-529450,
           530170-530271,530345-530440,531437-531444,531575-531616,
           531830-531894,534761-534853,534888-534959,535303-535509,
           536318-537226,537503-538158
          Length = 1429

 Score = 31.9 bits (69), Expect = 0.70
 Identities = 18/59 (30%), Positives = 33/59 (55%)
 Frame = +3

Query: 360 ALGDANGKAKEALEQSRQNIERTAEELRKAHPDVEKNATALREKLQAAVQNTVQESQKL 536
           A+ DA G+ ++A+E     ++   E+L  A+PDVE     L E L+ A ++  ++ + L
Sbjct: 515 AIYDAMGRVEDAIEILEHVLKVREEKLGTANPDVEDEKLRLAELLKEAGRSRNRKQKSL 573


>04_01_0180 + 2034021-2034023,2034741-2035088
          Length = 116

 Score = 30.7 bits (66), Expect = 1.6
 Identities = 18/44 (40%), Positives = 25/44 (56%), Gaps = 3/44 (6%)
 Frame = +3

Query: 390 EALEQSRQNIERTAEELRKAHPDVEKNATALREK---LQAAVQN 512
           EALE+  QN+ R  EE +K H +++K    L  K   L AA +N
Sbjct: 52  EALERQVQNLTRYKEEKQKQHANLQKEFAELERKYRDLDAAHRN 95


>02_05_0471 - 29306334-29306398,29306579-29306775,29307744-29309665
          Length = 727

 Score = 29.9 bits (64), Expect = 2.8
 Identities = 17/56 (30%), Positives = 29/56 (51%)
 Frame = +3

Query: 369 DANGKAKEALEQSRQNIERTAEELRKAHPDVEKNATALREKLQAAVQNTVQESQKL 536
           DA G+  EA+E     +    E+L  A+PDV+     L E L+ A +   ++++ L
Sbjct: 637 DAMGRLDEAIEILEHVVGMREEKLGTANPDVDDEKRRLAELLKEAGRGRSRKAKSL 692


>02_02_0331 +
           9017291-9019084,9019205-9019402,9020014-9020184,
           9020292-9020435,9020552-9020764,9020859-9021929,
           9022365-9022391
          Length = 1205

 Score = 29.9 bits (64), Expect = 2.8
 Identities = 18/49 (36%), Positives = 25/49 (51%), Gaps = 1/49 (2%)
 Frame = +3

Query: 387 KEALEQSRQNIERTAEELR-KAHPDVEKNATALREKLQAAVQNTVQESQ 530
           K+  +QS    ERT  E + KAH ++ K      E +QAA    +QE Q
Sbjct: 416 KQDAKQSDPKKERTVSEAKEKAHDEMNKGRAYGNETVQAASVKQMQEEQ 464


>02_04_0315 - 21969416-21970756
          Length = 446

 Score = 29.5 bits (63), Expect = 3.8
 Identities = 18/64 (28%), Positives = 32/64 (50%)
 Frame = +3

Query: 369 DANGKAKEALEQSRQNIERTAEELRKAHPDVEKNATALREKLQAAVQNTVQESQKLAKKV 548
           D NG  + ALE++ + +    E L  A  +  K   A+ EK ++A++   QE++ L    
Sbjct: 246 DENGSLRRALERAVEEVNAANESLELATGENSKLQDAVAEK-ESAMEALRQENESLKASE 304

Query: 549 SSXR 560
           +  R
Sbjct: 305 AEAR 308


>08_02_0776 -
           21083181-21083187,21083256-21083683,21083800-21084048,
           21084172-21084248,21084351-21084483
          Length = 297

 Score = 28.7 bits (61), Expect = 6.6
 Identities = 19/60 (31%), Positives = 33/60 (55%), Gaps = 3/60 (5%)
 Frame = +3

Query: 366 GDANGKAKEAL-EQSRQNIERTAEELRKAHPDVE-KNATALREKLQAA-VQNTVQESQKL 536
           GD++G AKE L + SR  ++   E  RK    +E K    LR + Q   +Q+ ++ +Q++
Sbjct: 120 GDSDGDAKEGLRDSSRSMVQMQREVQRKLQEQIEVKRHLQLRMEAQGRYLQSVLRRAQQV 179


>07_03_0358 - 17177253-17177369,17177635-17177931,17178961-17179032,
            17179117-17179383,17179752-17179910,17180194-17180295,
            17180696-17180767,17181105-17181200,17181710-17181871,
            17181941-17182021,17182837-17183094,17183173-17183275,
            17183412-17183542,17184827-17184919,17184999-17185099,
            17186271-17186355,17186487-17186701,17186779-17186842,
            17187128-17187214,17188922-17189022,17190206-17190397,
            17190533-17190599,17191211-17191351
          Length = 1020

 Score = 28.7 bits (61), Expect = 6.6
 Identities = 33/113 (29%), Positives = 48/113 (42%), Gaps = 5/113 (4%)
 Frame = +3

Query: 345  RVSRXALGDANGKAKEALEQSRQ-----NIERTAEELRKAHPDVEKNATALREKLQAAVQ 509
            +V R A   A  + K+ +E +RQ        R AEE RKA  +  K    L++ +Q   Q
Sbjct: 819  KVHRDAAEQAEQQNKQKMEVARQIALADEARRKAEEQRKAQLERRKQEDELKQVMQ---Q 875

Query: 510  NTVQESQKLAKKVSSXRAGD**ETGAQDQGRLRRLREEHPGGDQEDPGGRQRQ 668
                E  K   K SS        T  + + R +   EE  G  +   GGR+R+
Sbjct: 876  EQHFERVKEQWKTSS-------NTPGKRKDRSKHEDEEGGGEKRRKKGGRRRK 921


>03_02_0984 +
           12947444-12947530,12949071-12949127,12949833-12949904,
           12950050-12950112,12950955-12951131,12951503-12951628,
           12951711-12951777,12952019-12952215,12952617-12952691,
           12954524-12954554,12954714-12954802,12955120-12955188,
           12955306-12955425,12955963-12956081,12956303-12956441,
           12956538-12957038,12957293-12957592,12957694-12957875,
           12958277-12958388,12958953-12959072
          Length = 900

 Score = 28.7 bits (61), Expect = 6.6
 Identities = 17/54 (31%), Positives = 30/54 (55%)
 Frame = +3

Query: 456 DVEKNATALREKLQAAVQNTVQESQKLAKKVSSXRAGD**ETGAQDQGRLRRLR 617
           D+ K    LR+ LQAA + + + +++L +  S     D     +++ GRLRRL+
Sbjct: 678 DLRKEIQTLRKGLQAAKEASEKAARELEEAKSIIEIVDGQPVPSENPGRLRRLQ 731


>06_01_0916 +
           7058991-7059050,7060057-7061235,7061778-7063481,
           7063557-7064432,7064457-7064660,7065039-7065143,
           7065407-7065496,7066066-7066176,7066349-7066780
          Length = 1586

 Score = 28.3 bits (60), Expect = 8.7
 Identities = 18/64 (28%), Positives = 33/64 (51%), Gaps = 1/64 (1%)
 Frame = +3

Query: 381 KAKEALEQSR-QNIERTAEELRKAHPDVEKNATALREKLQAAVQNTVQESQKLAKKVSSX 557
           + +  LE  R Q ++RT+E+L + +      ++ LRE + A  Q +    +    +V+  
Sbjct: 647 RIRSQLESERVQRLQRTSEKLNRVNEWQAVRSSKLREVMNARHQRSESRHEAYLAQVAK- 705

Query: 558 RAGD 569
           RAGD
Sbjct: 706 RAGD 709


>03_05_0512 + 25069175-25070533,25072177-25072226,25072308-25072401
          Length = 500

 Score = 28.3 bits (60), Expect = 8.7
 Identities = 14/44 (31%), Positives = 24/44 (54%)
 Frame = +3

Query: 366 GDANGKAKEALEQSRQNIERTAEELRKAHPDVEKNATALREKLQ 497
           GD  G+ + A+  +R   E  A  LR+A    ++ A ALR +++
Sbjct: 47  GDGEGEGEGAVVLARVEAEEEAAALREAVAAAQETAAALRSEVE 90


>01_01_0933 -
           7368672-7368785,7368860-7368895,7369581-7369715,
           7369825-7369989,7370060-7370140,7370316-7370391,
           7370479-7370612,7370706-7370798,7371860-7372188,
           7372290-7372350,7372407-7372778
          Length = 531

 Score = 28.3 bits (60), Expect = 8.7
 Identities = 13/41 (31%), Positives = 17/41 (41%)
 Frame = -2

Query: 447 PCGAPRPCARCSASTVPKPPWPCRSRLRALPWRLLAKALSC 325
           PC  P P  R  ++T  + PW    R R + W  L     C
Sbjct: 26  PCTTPAPRMRSLSATTTRRPWRTGWRGRPMRWASLVVMKLC 66


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,498,758
Number of Sequences: 37544
Number of extensions: 320314
Number of successful extensions: 1458
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 1391
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1458
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2503236492
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)