Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP26_F_J14
(959 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U14992-1|AAB60338.1| 243|Homo sapiens ribosomal protein S3 prot... 190 6e-48
U14991-1|AAB60337.1| 243|Homo sapiens ribosomal protein S3 prot... 190 6e-48
U14990-1|AAB60336.1| 243|Homo sapiens ribosomal protein S3 prot... 190 6e-48
S42658-1|AAB19349.2| 243|Homo sapiens S3 ribosomal protein prot... 190 6e-48
BC100284-1|AAI00285.1| 243|Homo sapiens ribosomal protein S3 pr... 190 6e-48
BC071917-1|AAH71917.1| 243|Homo sapiens ribosomal protein S3 pr... 190 6e-48
BC034149-1|AAH34149.1| 243|Homo sapiens ribosomal protein S3 pr... 190 6e-48
BC013196-1|AAH13196.1| 242|Homo sapiens Unknown (protein for IM... 190 6e-48
BC003577-1|AAH03577.1| 242|Homo sapiens Unknown (protein for IM... 190 6e-48
BC003137-1|AAH03137.1| 243|Homo sapiens ribosomal protein S3 pr... 190 6e-48
AY791291-1|AAV40835.1| 243|Homo sapiens ribosomal protein S3 pr... 190 6e-48
AB061838-1|BAB79476.1| 243|Homo sapiens ribosomal protein S3 pr... 190 6e-48
AK223048-1|BAD96768.1| 243|Homo sapiens ribosomal protein S3 va... 188 2e-47
X55715-1|CAA39248.1| 243|Homo sapiens protein ( Human Hums3 mRN... 188 3e-47
BC071669-1|AAH71669.1| 117|Homo sapiens RPS3 protein protein. 149 2e-35
BC150501-1|AAI50502.1| 133|Homo sapiens Unknown (protein for IM... 138 3e-32
L16016-1|AAA18095.1| 95|Homo sapiens ribosomal protein S3 prot... 111 5e-24
AF281313-1|AAF82383.1| 158|Homo sapiens ribosomal protein S3 pr... 103 1e-21
AB062288-1|BAB93471.1| 117|Homo sapiens IMR-90 ribosomal protei... 53 2e-06
>U14992-1|AAB60338.1| 243|Homo sapiens ribosomal protein S3
protein.
Length = 243
Score = 190 bits (463), Expect = 6e-48
Identities = 92/105 (87%), Positives = 98/105 (93%)
Frame = +1
Query: 202 GYSGVEVRVTPIRSEIIIMATRTQSVLGEKGRRIRELTSXVQKRFNIPEQSVELYAEKVA 381
GYSGVEVRVTP R+EIII+ATRTQ+VLGEKGRRIRELT+ VQKRF PE SVELYAEKVA
Sbjct: 33 GYSGVEVRVTPTRTEIIILATRTQNVLGEKGRRIRELTAVVQKRFGFPEGSVELYAEKVA 92
Query: 382 TRGLCAIAQXESLRYKLIGGLXVRRACYGVLRFIMESGARGCEVV 516
TRGLCAIAQ ESLRYKL+GGL VRRACYGVLRFIMESGA+GCEVV
Sbjct: 93 TRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVV 137
Score = 52.8 bits (121), Expect = 2e-06
Identities = 26/36 (72%), Positives = 28/36 (77%)
Frame = +2
Query: 518 VSGKLRGXRAKSMKXVXGLMIHSGXPCHDXVNTATR 625
VSGKLRG RAKSMK V GLMIHSG P + V+TA R
Sbjct: 138 VSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVR 173
>U14991-1|AAB60337.1| 243|Homo sapiens ribosomal protein S3
protein.
Length = 243
Score = 190 bits (463), Expect = 6e-48
Identities = 92/105 (87%), Positives = 98/105 (93%)
Frame = +1
Query: 202 GYSGVEVRVTPIRSEIIIMATRTQSVLGEKGRRIRELTSXVQKRFNIPEQSVELYAEKVA 381
GYSGVEVRVTP R+EIII+ATRTQ+VLGEKGRRIRELT+ VQKRF PE SVELYAEKVA
Sbjct: 33 GYSGVEVRVTPTRTEIIILATRTQNVLGEKGRRIRELTAVVQKRFGFPEGSVELYAEKVA 92
Query: 382 TRGLCAIAQXESLRYKLIGGLXVRRACYGVLRFIMESGARGCEVV 516
TRGLCAIAQ ESLRYKL+GGL VRRACYGVLRFIMESGA+GCEVV
Sbjct: 93 TRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVV 137
Score = 52.8 bits (121), Expect = 2e-06
Identities = 26/36 (72%), Positives = 28/36 (77%)
Frame = +2
Query: 518 VSGKLRGXRAKSMKXVXGLMIHSGXPCHDXVNTATR 625
VSGKLRG RAKSMK V GLMIHSG P + V+TA R
Sbjct: 138 VSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVR 173
>U14990-1|AAB60336.1| 243|Homo sapiens ribosomal protein S3
protein.
Length = 243
Score = 190 bits (463), Expect = 6e-48
Identities = 92/105 (87%), Positives = 98/105 (93%)
Frame = +1
Query: 202 GYSGVEVRVTPIRSEIIIMATRTQSVLGEKGRRIRELTSXVQKRFNIPEQSVELYAEKVA 381
GYSGVEVRVTP R+EIII+ATRTQ+VLGEKGRRIRELT+ VQKRF PE SVELYAEKVA
Sbjct: 33 GYSGVEVRVTPTRTEIIILATRTQNVLGEKGRRIRELTAVVQKRFGFPEGSVELYAEKVA 92
Query: 382 TRGLCAIAQXESLRYKLIGGLXVRRACYGVLRFIMESGARGCEVV 516
TRGLCAIAQ ESLRYKL+GGL VRRACYGVLRFIMESGA+GCEVV
Sbjct: 93 TRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVV 137
Score = 52.8 bits (121), Expect = 2e-06
Identities = 26/36 (72%), Positives = 28/36 (77%)
Frame = +2
Query: 518 VSGKLRGXRAKSMKXVXGLMIHSGXPCHDXVNTATR 625
VSGKLRG RAKSMK V GLMIHSG P + V+TA R
Sbjct: 138 VSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVR 173
>S42658-1|AAB19349.2| 243|Homo sapiens S3 ribosomal protein
protein.
Length = 243
Score = 190 bits (463), Expect = 6e-48
Identities = 92/105 (87%), Positives = 98/105 (93%)
Frame = +1
Query: 202 GYSGVEVRVTPIRSEIIIMATRTQSVLGEKGRRIRELTSXVQKRFNIPEQSVELYAEKVA 381
GYSGVEVRVTP R+EIII+ATRTQ+VLGEKGRRIRELT+ VQKRF PE SVELYAEKVA
Sbjct: 33 GYSGVEVRVTPTRTEIIILATRTQNVLGEKGRRIRELTAVVQKRFGFPEGSVELYAEKVA 92
Query: 382 TRGLCAIAQXESLRYKLIGGLXVRRACYGVLRFIMESGARGCEVV 516
TRGLCAIAQ ESLRYKL+GGL VRRACYGVLRFIMESGA+GCEVV
Sbjct: 93 TRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVV 137
Score = 52.8 bits (121), Expect = 2e-06
Identities = 26/36 (72%), Positives = 28/36 (77%)
Frame = +2
Query: 518 VSGKLRGXRAKSMKXVXGLMIHSGXPCHDXVNTATR 625
VSGKLRG RAKSMK V GLMIHSG P + V+TA R
Sbjct: 138 VSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVR 173
>BC100284-1|AAI00285.1| 243|Homo sapiens ribosomal protein S3
protein.
Length = 243
Score = 190 bits (463), Expect = 6e-48
Identities = 92/105 (87%), Positives = 98/105 (93%)
Frame = +1
Query: 202 GYSGVEVRVTPIRSEIIIMATRTQSVLGEKGRRIRELTSXVQKRFNIPEQSVELYAEKVA 381
GYSGVEVRVTP R+EIII+ATRTQ+VLGEKGRRIRELT+ VQKRF PE SVELYAEKVA
Sbjct: 33 GYSGVEVRVTPTRTEIIILATRTQNVLGEKGRRIRELTAVVQKRFGFPEGSVELYAEKVA 92
Query: 382 TRGLCAIAQXESLRYKLIGGLXVRRACYGVLRFIMESGARGCEVV 516
TRGLCAIAQ ESLRYKL+GGL VRRACYGVLRFIMESGA+GCEVV
Sbjct: 93 TRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVV 137
Score = 52.8 bits (121), Expect = 2e-06
Identities = 26/36 (72%), Positives = 28/36 (77%)
Frame = +2
Query: 518 VSGKLRGXRAKSMKXVXGLMIHSGXPCHDXVNTATR 625
VSGKLRG RAKSMK V GLMIHSG P + V+TA R
Sbjct: 138 VSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVR 173
>BC071917-1|AAH71917.1| 243|Homo sapiens ribosomal protein S3
protein.
Length = 243
Score = 190 bits (463), Expect = 6e-48
Identities = 92/105 (87%), Positives = 98/105 (93%)
Frame = +1
Query: 202 GYSGVEVRVTPIRSEIIIMATRTQSVLGEKGRRIRELTSXVQKRFNIPEQSVELYAEKVA 381
GYSGVEVRVTP R+EIII+ATRTQ+VLGEKGRRIRELT+ VQKRF PE SVELYAEKVA
Sbjct: 33 GYSGVEVRVTPTRTEIIILATRTQNVLGEKGRRIRELTAVVQKRFGFPEGSVELYAEKVA 92
Query: 382 TRGLCAIAQXESLRYKLIGGLXVRRACYGVLRFIMESGARGCEVV 516
TRGLCAIAQ ESLRYKL+GGL VRRACYGVLRFIMESGA+GCEVV
Sbjct: 93 TRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVV 137
Score = 52.8 bits (121), Expect = 2e-06
Identities = 26/36 (72%), Positives = 28/36 (77%)
Frame = +2
Query: 518 VSGKLRGXRAKSMKXVXGLMIHSGXPCHDXVNTATR 625
VSGKLRG RAKSMK V GLMIHSG P + V+TA R
Sbjct: 138 VSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVR 173
>BC034149-1|AAH34149.1| 243|Homo sapiens ribosomal protein S3
protein.
Length = 243
Score = 190 bits (463), Expect = 6e-48
Identities = 92/105 (87%), Positives = 98/105 (93%)
Frame = +1
Query: 202 GYSGVEVRVTPIRSEIIIMATRTQSVLGEKGRRIRELTSXVQKRFNIPEQSVELYAEKVA 381
GYSGVEVRVTP R+EIII+ATRTQ+VLGEKGRRIRELT+ VQKRF PE SVELYAEKVA
Sbjct: 33 GYSGVEVRVTPTRTEIIILATRTQNVLGEKGRRIRELTAVVQKRFGFPEGSVELYAEKVA 92
Query: 382 TRGLCAIAQXESLRYKLIGGLXVRRACYGVLRFIMESGARGCEVV 516
TRGLCAIAQ ESLRYKL+GGL VRRACYGVLRFIMESGA+GCEVV
Sbjct: 93 TRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVV 137
Score = 52.8 bits (121), Expect = 2e-06
Identities = 26/36 (72%), Positives = 28/36 (77%)
Frame = +2
Query: 518 VSGKLRGXRAKSMKXVXGLMIHSGXPCHDXVNTATR 625
VSGKLRG RAKSMK V GLMIHSG P + V+TA R
Sbjct: 138 VSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVR 173
>BC013196-1|AAH13196.1| 242|Homo sapiens Unknown (protein for
IMAGE:4347401) protein.
Length = 242
Score = 190 bits (463), Expect = 6e-48
Identities = 92/105 (87%), Positives = 98/105 (93%)
Frame = +1
Query: 202 GYSGVEVRVTPIRSEIIIMATRTQSVLGEKGRRIRELTSXVQKRFNIPEQSVELYAEKVA 381
GYSGVEVRVTP R+EIII+ATRTQ+VLGEKGRRIRELT+ VQKRF PE SVELYAEKVA
Sbjct: 32 GYSGVEVRVTPTRTEIIILATRTQNVLGEKGRRIRELTAVVQKRFGFPEGSVELYAEKVA 91
Query: 382 TRGLCAIAQXESLRYKLIGGLXVRRACYGVLRFIMESGARGCEVV 516
TRGLCAIAQ ESLRYKL+GGL VRRACYGVLRFIMESGA+GCEVV
Sbjct: 92 TRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVV 136
Score = 52.8 bits (121), Expect = 2e-06
Identities = 26/36 (72%), Positives = 28/36 (77%)
Frame = +2
Query: 518 VSGKLRGXRAKSMKXVXGLMIHSGXPCHDXVNTATR 625
VSGKLRG RAKSMK V GLMIHSG P + V+TA R
Sbjct: 137 VSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVR 172
>BC003577-1|AAH03577.1| 242|Homo sapiens Unknown (protein for
IMAGE:3544292) protein.
Length = 242
Score = 190 bits (463), Expect = 6e-48
Identities = 92/105 (87%), Positives = 98/105 (93%)
Frame = +1
Query: 202 GYSGVEVRVTPIRSEIIIMATRTQSVLGEKGRRIRELTSXVQKRFNIPEQSVELYAEKVA 381
GYSGVEVRVTP R+EIII+ATRTQ+VLGEKGRRIRELT+ VQKRF PE SVELYAEKVA
Sbjct: 32 GYSGVEVRVTPTRTEIIILATRTQNVLGEKGRRIRELTAVVQKRFGFPEGSVELYAEKVA 91
Query: 382 TRGLCAIAQXESLRYKLIGGLXVRRACYGVLRFIMESGARGCEVV 516
TRGLCAIAQ ESLRYKL+GGL VRRACYGVLRFIMESGA+GCEVV
Sbjct: 92 TRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVV 136
Score = 52.8 bits (121), Expect = 2e-06
Identities = 26/36 (72%), Positives = 28/36 (77%)
Frame = +2
Query: 518 VSGKLRGXRAKSMKXVXGLMIHSGXPCHDXVNTATR 625
VSGKLRG RAKSMK V GLMIHSG P + V+TA R
Sbjct: 137 VSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVR 172
>BC003137-1|AAH03137.1| 243|Homo sapiens ribosomal protein S3
protein.
Length = 243
Score = 190 bits (463), Expect = 6e-48
Identities = 92/105 (87%), Positives = 98/105 (93%)
Frame = +1
Query: 202 GYSGVEVRVTPIRSEIIIMATRTQSVLGEKGRRIRELTSXVQKRFNIPEQSVELYAEKVA 381
GYSGVEVRVTP R+EIII+ATRTQ+VLGEKGRRIRELT+ VQKRF PE SVELYAEKVA
Sbjct: 33 GYSGVEVRVTPTRTEIIILATRTQNVLGEKGRRIRELTAVVQKRFGFPEGSVELYAEKVA 92
Query: 382 TRGLCAIAQXESLRYKLIGGLXVRRACYGVLRFIMESGARGCEVV 516
TRGLCAIAQ ESLRYKL+GGL VRRACYGVLRFIMESGA+GCEVV
Sbjct: 93 TRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVV 137
Score = 52.8 bits (121), Expect = 2e-06
Identities = 26/36 (72%), Positives = 28/36 (77%)
Frame = +2
Query: 518 VSGKLRGXRAKSMKXVXGLMIHSGXPCHDXVNTATR 625
VSGKLRG RAKSMK V GLMIHSG P + V+TA R
Sbjct: 138 VSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVR 173
>AY791291-1|AAV40835.1| 243|Homo sapiens ribosomal protein S3
protein.
Length = 243
Score = 190 bits (463), Expect = 6e-48
Identities = 92/105 (87%), Positives = 98/105 (93%)
Frame = +1
Query: 202 GYSGVEVRVTPIRSEIIIMATRTQSVLGEKGRRIRELTSXVQKRFNIPEQSVELYAEKVA 381
GYSGVEVRVTP R+EIII+ATRTQ+VLGEKGRRIRELT+ VQKRF PE SVELYAEKVA
Sbjct: 33 GYSGVEVRVTPTRTEIIILATRTQNVLGEKGRRIRELTAVVQKRFGFPEGSVELYAEKVA 92
Query: 382 TRGLCAIAQXESLRYKLIGGLXVRRACYGVLRFIMESGARGCEVV 516
TRGLCAIAQ ESLRYKL+GGL VRRACYGVLRFIMESGA+GCEVV
Sbjct: 93 TRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVV 137
Score = 52.8 bits (121), Expect = 2e-06
Identities = 26/36 (72%), Positives = 28/36 (77%)
Frame = +2
Query: 518 VSGKLRGXRAKSMKXVXGLMIHSGXPCHDXVNTATR 625
VSGKLRG RAKSMK V GLMIHSG P + V+TA R
Sbjct: 138 VSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVR 173
>AB061838-1|BAB79476.1| 243|Homo sapiens ribosomal protein S3
protein.
Length = 243
Score = 190 bits (463), Expect = 6e-48
Identities = 92/105 (87%), Positives = 98/105 (93%)
Frame = +1
Query: 202 GYSGVEVRVTPIRSEIIIMATRTQSVLGEKGRRIRELTSXVQKRFNIPEQSVELYAEKVA 381
GYSGVEVRVTP R+EIII+ATRTQ+VLGEKGRRIRELT+ VQKRF PE SVELYAEKVA
Sbjct: 33 GYSGVEVRVTPTRTEIIILATRTQNVLGEKGRRIRELTAVVQKRFGFPEGSVELYAEKVA 92
Query: 382 TRGLCAIAQXESLRYKLIGGLXVRRACYGVLRFIMESGARGCEVV 516
TRGLCAIAQ ESLRYKL+GGL VRRACYGVLRFIMESGA+GCEVV
Sbjct: 93 TRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVV 137
Score = 52.8 bits (121), Expect = 2e-06
Identities = 26/36 (72%), Positives = 28/36 (77%)
Frame = +2
Query: 518 VSGKLRGXRAKSMKXVXGLMIHSGXPCHDXVNTATR 625
VSGKLRG RAKSMK V GLMIHSG P + V+TA R
Sbjct: 138 VSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVR 173
>AK223048-1|BAD96768.1| 243|Homo sapiens ribosomal protein S3
variant protein.
Length = 243
Score = 188 bits (459), Expect = 2e-47
Identities = 91/105 (86%), Positives = 98/105 (93%)
Frame = +1
Query: 202 GYSGVEVRVTPIRSEIIIMATRTQSVLGEKGRRIRELTSXVQKRFNIPEQSVELYAEKVA 381
GYSGVEVRVTP R+EIII+ATRTQ+VLGEKGRRIRELT+ VQKRF PE SVELYAE+VA
Sbjct: 33 GYSGVEVRVTPTRTEIIILATRTQNVLGEKGRRIRELTAVVQKRFGFPEGSVELYAEEVA 92
Query: 382 TRGLCAIAQXESLRYKLIGGLXVRRACYGVLRFIMESGARGCEVV 516
TRGLCAIAQ ESLRYKL+GGL VRRACYGVLRFIMESGA+GCEVV
Sbjct: 93 TRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVV 137
Score = 52.8 bits (121), Expect = 2e-06
Identities = 26/36 (72%), Positives = 28/36 (77%)
Frame = +2
Query: 518 VSGKLRGXRAKSMKXVXGLMIHSGXPCHDXVNTATR 625
VSGKLRG RAKSMK V GLMIHSG P + V+TA R
Sbjct: 138 VSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVR 173
>X55715-1|CAA39248.1| 243|Homo sapiens protein ( Human Hums3 mRNA
for 40S ribosomal protein s3. ).
Length = 243
Score = 188 bits (458), Expect = 3e-47
Identities = 91/105 (86%), Positives = 97/105 (92%)
Frame = +1
Query: 202 GYSGVEVRVTPIRSEIIIMATRTQSVLGEKGRRIRELTSXVQKRFNIPEQSVELYAEKVA 381
GYSGVEVRVTP R+EIII+ATRTQ+VLGEKGRRIRELT+ VQKRF PE SVELYAEKVA
Sbjct: 33 GYSGVEVRVTPTRTEIIILATRTQNVLGEKGRRIRELTAVVQKRFGFPEGSVELYAEKVA 92
Query: 382 TRGLCAIAQXESLRYKLIGGLXVRRACYGVLRFIMESGARGCEVV 516
TRGLCAIAQ E LRYKL+GGL VRRACYGVLRFIMESGA+GCEVV
Sbjct: 93 TRGLCAIAQAECLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVV 137
Score = 52.8 bits (121), Expect = 2e-06
Identities = 26/36 (72%), Positives = 28/36 (77%)
Frame = +2
Query: 518 VSGKLRGXRAKSMKXVXGLMIHSGXPCHDXVNTATR 625
VSGKLRG RAKSMK V GLMIHSG P + V+TA R
Sbjct: 138 VSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVR 173
>BC071669-1|AAH71669.1| 117|Homo sapiens RPS3 protein protein.
Length = 117
Score = 149 bits (360), Expect = 2e-35
Identities = 73/85 (85%), Positives = 78/85 (91%)
Frame = +1
Query: 202 GYSGVEVRVTPIRSEIIIMATRTQSVLGEKGRRIRELTSXVQKRFNIPEQSVELYAEKVA 381
GYSGVEVRVTP R+EIII+ATRTQ+VLGEKGRRIRELT+ VQKRF PE SVELYAEKVA
Sbjct: 33 GYSGVEVRVTPTRTEIIILATRTQNVLGEKGRRIRELTAVVQKRFGFPEGSVELYAEKVA 92
Query: 382 TRGLCAIAQXESLRYKLIGGLXVRR 456
TRGLCAIAQ ESLRYKL+GGL VRR
Sbjct: 93 TRGLCAIAQAESLRYKLLGGLAVRR 117
>BC150501-1|AAI50502.1| 133|Homo sapiens Unknown (protein for
IMAGE:40134452) protein.
Length = 133
Score = 138 bits (334), Expect = 3e-32
Identities = 66/76 (86%), Positives = 70/76 (92%)
Frame = +1
Query: 289 KGRRIRELTSXVQKRFNIPEQSVELYAEKVATRGLCAIAQXESLRYKLIGGLXVRRACYG 468
+GRRIRELT+ VQKRF PE SVELYAEKVATRGLCAIAQ ESLRYKL+GGL VRRACYG
Sbjct: 6 QGRRIRELTAVVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACYG 65
Query: 469 VLRFIMESGARGCEVV 516
VLRFIMESGA+GCEVV
Sbjct: 66 VLRFIMESGAKGCEVV 81
Score = 52.8 bits (121), Expect = 2e-06
Identities = 26/36 (72%), Positives = 28/36 (77%)
Frame = +2
Query: 518 VSGKLRGXRAKSMKXVXGLMIHSGXPCHDXVNTATR 625
VSGKLRG RAKSMK V GLMIHSG P + V+TA R
Sbjct: 82 VSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVR 117
>L16016-1|AAA18095.1| 95|Homo sapiens ribosomal protein S3
protein.
Length = 95
Score = 111 bits (266), Expect = 5e-24
Identities = 54/63 (85%), Positives = 58/63 (92%)
Frame = +1
Query: 202 GYSGVEVRVTPIRSEIIIMATRTQSVLGEKGRRIRELTSXVQKRFNIPEQSVELYAEKVA 381
GYSGVEVRVTP R+EIII+ATRTQ+VLGEKGRRIRELT+ VQKRF PE SVELYAEKVA
Sbjct: 33 GYSGVEVRVTPTRTEIIILATRTQNVLGEKGRRIRELTAVVQKRFGFPEGSVELYAEKVA 92
Query: 382 TRG 390
TRG
Sbjct: 93 TRG 95
>AF281313-1|AAF82383.1| 158|Homo sapiens ribosomal protein S3
protein.
Length = 158
Score = 103 bits (246), Expect = 1e-21
Identities = 48/52 (92%), Positives = 50/52 (96%)
Frame = +1
Query: 361 LYAEKVATRGLCAIAQXESLRYKLIGGLXVRRACYGVLRFIMESGARGCEVV 516
LYAEKVATRGLCAIAQ ESLRYKL+GGL VRRACYGVLRFIMESGA+GCEVV
Sbjct: 1 LYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVV 52
Score = 52.8 bits (121), Expect = 2e-06
Identities = 26/36 (72%), Positives = 28/36 (77%)
Frame = +2
Query: 518 VSGKLRGXRAKSMKXVXGLMIHSGXPCHDXVNTATR 625
VSGKLRG RAKSMK V GLMIHSG P + V+TA R
Sbjct: 53 VSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVR 88
>AB062288-1|BAB93471.1| 117|Homo sapiens IMR-90 ribosomal protein
S3 protein.
Length = 117
Score = 52.8 bits (121), Expect = 2e-06
Identities = 26/36 (72%), Positives = 28/36 (77%)
Frame = +2
Query: 518 VSGKLRGXRAKSMKXVXGLMIHSGXPCHDXVNTATR 625
VSGKLRG RAKSMK V GLMIHSG P + V+TA R
Sbjct: 12 VSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVR 47
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 109,941,965
Number of Sequences: 237096
Number of extensions: 2027531
Number of successful extensions: 7476
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 7335
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7476
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 12714176638
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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