Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP26_F_J14
(959 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
L13690-1|AAA28875.1| 246|Drosophila melanogaster ribosomal prot... 179 5e-45
BT024258-1|ABC86320.1| 253|Drosophila melanogaster IP15838p pro... 179 5e-45
AY118971-1|AAM50831.1| 246|Drosophila melanogaster LD47488p pro... 179 5e-45
AE014297-3319|AAF56129.1| 246|Drosophila melanogaster CG6779-PA... 179 5e-45
X72921-1|CAA51425.1| 246|Drosophila melanogaster ribosomal prot... 171 9e-43
AJ238847-1|CAB52798.1| 1301|Drosophila melanogaster drosophila d... 31 2.4
AF132179-1|AAD34767.1| 1301|Drosophila melanogaster unknown prot... 31 2.4
AE013599-2691|AAM68451.1| 1301|Drosophila melanogaster CG5170-PF... 31 2.4
AE013599-2690|AAM68450.1| 1301|Drosophila melanogaster CG5170-PE... 31 2.4
AE013599-2689|AAM68449.1| 1301|Drosophila melanogaster CG5170-PD... 31 2.4
AE013599-2688|AAF57691.2| 1301|Drosophila melanogaster CG5170-PC... 31 2.4
AE013599-2687|AAS64810.1| 1301|Drosophila melanogaster CG5170-PB... 31 2.4
AE013599-2686|AAS64809.1| 1301|Drosophila melanogaster CG5170-PA... 31 2.4
>L13690-1|AAA28875.1| 246|Drosophila melanogaster ribosomal protein
S3/AP endonucleaseDNA repair protein protein.
Length = 246
Score = 179 bits (436), Expect = 5e-45
Identities = 87/105 (82%), Positives = 93/105 (88%)
Frame = +1
Query: 202 GYSGVEVRVTPIRSEIIIMATRTQSVLGEKGRRIRELTSXVQKRFNIPEQSVELYAEKVA 381
GYSGVEVRVTP R+EIIIMAT+TQ VLGEKGRRIRELT+ VQKRFN +ELYAEKVA
Sbjct: 35 GYSGVEVRVTPSRTEIIIMATKTQQVLGEKGRRIRELTAMVQKRFNFETGRIELYAEKVA 94
Query: 382 TRGLCAIAQXESLRYKLIGGLXVRRACYGVLRFIMESGARGCEVV 516
RGLCAIAQ ESLRYKL GGL VRRACYGVLR+IMESGA+GCEVV
Sbjct: 95 ARGLCAIAQAESLRYKLTGGLAVRRACYGVLRYIMESGAKGCEVV 139
Score = 62.1 bits (144), Expect = 1e-09
Identities = 29/36 (80%), Positives = 30/36 (83%)
Frame = +2
Query: 518 VSGKLRGXRAKSMKXVXGLMIHSGXPCHDXVNTATR 625
VSGKLRG RAKSMK V GLMIHSG PC+D V TATR
Sbjct: 140 VSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVETATR 175
>BT024258-1|ABC86320.1| 253|Drosophila melanogaster IP15838p
protein.
Length = 253
Score = 179 bits (436), Expect = 5e-45
Identities = 87/105 (82%), Positives = 93/105 (88%)
Frame = +1
Query: 202 GYSGVEVRVTPIRSEIIIMATRTQSVLGEKGRRIRELTSXVQKRFNIPEQSVELYAEKVA 381
GYSGVEVRVTP R+EIIIMAT+TQ VLGEKGRRIRELT+ VQKRFN +ELYAEKVA
Sbjct: 42 GYSGVEVRVTPSRTEIIIMATKTQQVLGEKGRRIRELTAMVQKRFNFETGRIELYAEKVA 101
Query: 382 TRGLCAIAQXESLRYKLIGGLXVRRACYGVLRFIMESGARGCEVV 516
RGLCAIAQ ESLRYKL GGL VRRACYGVLR+IMESGA+GCEVV
Sbjct: 102 ARGLCAIAQAESLRYKLTGGLAVRRACYGVLRYIMESGAKGCEVV 146
Score = 62.1 bits (144), Expect = 1e-09
Identities = 29/36 (80%), Positives = 30/36 (83%)
Frame = +2
Query: 518 VSGKLRGXRAKSMKXVXGLMIHSGXPCHDXVNTATR 625
VSGKLRG RAKSMK V GLMIHSG PC+D V TATR
Sbjct: 147 VSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVETATR 182
>AY118971-1|AAM50831.1| 246|Drosophila melanogaster LD47488p
protein.
Length = 246
Score = 179 bits (436), Expect = 5e-45
Identities = 87/105 (82%), Positives = 93/105 (88%)
Frame = +1
Query: 202 GYSGVEVRVTPIRSEIIIMATRTQSVLGEKGRRIRELTSXVQKRFNIPEQSVELYAEKVA 381
GYSGVEVRVTP R+EIIIMAT+TQ VLGEKGRRIRELT+ VQKRFN +ELYAEKVA
Sbjct: 35 GYSGVEVRVTPSRTEIIIMATKTQQVLGEKGRRIRELTAMVQKRFNFETGRIELYAEKVA 94
Query: 382 TRGLCAIAQXESLRYKLIGGLXVRRACYGVLRFIMESGARGCEVV 516
RGLCAIAQ ESLRYKL GGL VRRACYGVLR+IMESGA+GCEVV
Sbjct: 95 ARGLCAIAQAESLRYKLTGGLAVRRACYGVLRYIMESGAKGCEVV 139
Score = 62.1 bits (144), Expect = 1e-09
Identities = 29/36 (80%), Positives = 30/36 (83%)
Frame = +2
Query: 518 VSGKLRGXRAKSMKXVXGLMIHSGXPCHDXVNTATR 625
VSGKLRG RAKSMK V GLMIHSG PC+D V TATR
Sbjct: 140 VSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVETATR 175
>AE014297-3319|AAF56129.1| 246|Drosophila melanogaster CG6779-PA
protein.
Length = 246
Score = 179 bits (436), Expect = 5e-45
Identities = 87/105 (82%), Positives = 93/105 (88%)
Frame = +1
Query: 202 GYSGVEVRVTPIRSEIIIMATRTQSVLGEKGRRIRELTSXVQKRFNIPEQSVELYAEKVA 381
GYSGVEVRVTP R+EIIIMAT+TQ VLGEKGRRIRELT+ VQKRFN +ELYAEKVA
Sbjct: 35 GYSGVEVRVTPSRTEIIIMATKTQQVLGEKGRRIRELTAMVQKRFNFETGRIELYAEKVA 94
Query: 382 TRGLCAIAQXESLRYKLIGGLXVRRACYGVLRFIMESGARGCEVV 516
RGLCAIAQ ESLRYKL GGL VRRACYGVLR+IMESGA+GCEVV
Sbjct: 95 ARGLCAIAQAESLRYKLTGGLAVRRACYGVLRYIMESGAKGCEVV 139
Score = 62.1 bits (144), Expect = 1e-09
Identities = 29/36 (80%), Positives = 30/36 (83%)
Frame = +2
Query: 518 VSGKLRGXRAKSMKXVXGLMIHSGXPCHDXVNTATR 625
VSGKLRG RAKSMK V GLMIHSG PC+D V TATR
Sbjct: 140 VSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVETATR 175
>X72921-1|CAA51425.1| 246|Drosophila melanogaster ribosomal protein
S3 protein.
Length = 246
Score = 171 bits (417), Expect = 9e-43
Identities = 84/105 (80%), Positives = 90/105 (85%)
Frame = +1
Query: 202 GYSGVEVRVTPIRSEIIIMATRTQSVLGEKGRRIRELTSXVQKRFNIPEQSVELYAEKVA 381
GYSGVEVRVTP +EIIIMAT+TQ VL EKGRRIRELT+ VQKRFN +ELYAEKVA
Sbjct: 35 GYSGVEVRVTPFGTEIIIMATKTQQVLAEKGRRIRELTAMVQKRFNFETGRIELYAEKVA 94
Query: 382 TRGLCAIAQXESLRYKLIGGLXVRRACYGVLRFIMESGARGCEVV 516
RGLCAIAQ ESLRYKL G L VRRACYGVLR+IMESGA+GCEVV
Sbjct: 95 ARGLCAIAQAESLRYKLTGELAVRRACYGVLRYIMESGAKGCEVV 139
Score = 62.1 bits (144), Expect = 1e-09
Identities = 29/36 (80%), Positives = 30/36 (83%)
Frame = +2
Query: 518 VSGKLRGXRAKSMKXVXGLMIHSGXPCHDXVNTATR 625
VSGKLRG RAKSMK V GLMIHSG PC+D V TATR
Sbjct: 140 VSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVETATR 175
>AJ238847-1|CAB52798.1| 1301|Drosophila melanogaster drosophila
dodeca-satellite protein1 protein.
Length = 1301
Score = 31.1 bits (67), Expect = 2.4
Identities = 14/44 (31%), Positives = 23/44 (52%)
Frame = +1
Query: 229 TPIRSEIIIMATRTQSVLGEKGRRIRELTSXVQKRFNIPEQSVE 360
T ++ + + +LG+ G+R+RE+ R NIP QS E
Sbjct: 167 TQASRQVTVPREHFRVILGKGGQRLREIERVTATRINIPSQSDE 210
>AF132179-1|AAD34767.1| 1301|Drosophila melanogaster unknown
protein.
Length = 1301
Score = 31.1 bits (67), Expect = 2.4
Identities = 14/44 (31%), Positives = 23/44 (52%)
Frame = +1
Query: 229 TPIRSEIIIMATRTQSVLGEKGRRIRELTSXVQKRFNIPEQSVE 360
T ++ + + +LG+ G+R+RE+ R NIP QS E
Sbjct: 167 TQASRQVTVPREHFRVILGKGGQRLREIERVTATRINIPSQSDE 210
>AE013599-2691|AAM68451.1| 1301|Drosophila melanogaster CG5170-PF,
isoform F protein.
Length = 1301
Score = 31.1 bits (67), Expect = 2.4
Identities = 14/44 (31%), Positives = 23/44 (52%)
Frame = +1
Query: 229 TPIRSEIIIMATRTQSVLGEKGRRIRELTSXVQKRFNIPEQSVE 360
T ++ + + +LG+ G+R+RE+ R NIP QS E
Sbjct: 167 TQASRQVTVPREHFRVILGKGGQRLREIERVTATRINIPSQSDE 210
>AE013599-2690|AAM68450.1| 1301|Drosophila melanogaster CG5170-PE,
isoform E protein.
Length = 1301
Score = 31.1 bits (67), Expect = 2.4
Identities = 14/44 (31%), Positives = 23/44 (52%)
Frame = +1
Query: 229 TPIRSEIIIMATRTQSVLGEKGRRIRELTSXVQKRFNIPEQSVE 360
T ++ + + +LG+ G+R+RE+ R NIP QS E
Sbjct: 167 TQASRQVTVPREHFRVILGKGGQRLREIERVTATRINIPSQSDE 210
>AE013599-2689|AAM68449.1| 1301|Drosophila melanogaster CG5170-PD,
isoform D protein.
Length = 1301
Score = 31.1 bits (67), Expect = 2.4
Identities = 14/44 (31%), Positives = 23/44 (52%)
Frame = +1
Query: 229 TPIRSEIIIMATRTQSVLGEKGRRIRELTSXVQKRFNIPEQSVE 360
T ++ + + +LG+ G+R+RE+ R NIP QS E
Sbjct: 167 TQASRQVTVPREHFRVILGKGGQRLREIERVTATRINIPSQSDE 210
>AE013599-2688|AAF57691.2| 1301|Drosophila melanogaster CG5170-PC,
isoform C protein.
Length = 1301
Score = 31.1 bits (67), Expect = 2.4
Identities = 14/44 (31%), Positives = 23/44 (52%)
Frame = +1
Query: 229 TPIRSEIIIMATRTQSVLGEKGRRIRELTSXVQKRFNIPEQSVE 360
T ++ + + +LG+ G+R+RE+ R NIP QS E
Sbjct: 167 TQASRQVTVPREHFRVILGKGGQRLREIERVTATRINIPSQSDE 210
>AE013599-2687|AAS64810.1| 1301|Drosophila melanogaster CG5170-PB,
isoform B protein.
Length = 1301
Score = 31.1 bits (67), Expect = 2.4
Identities = 14/44 (31%), Positives = 23/44 (52%)
Frame = +1
Query: 229 TPIRSEIIIMATRTQSVLGEKGRRIRELTSXVQKRFNIPEQSVE 360
T ++ + + +LG+ G+R+RE+ R NIP QS E
Sbjct: 167 TQASRQVTVPREHFRVILGKGGQRLREIERVTATRINIPSQSDE 210
>AE013599-2686|AAS64809.1| 1301|Drosophila melanogaster CG5170-PA,
isoform A protein.
Length = 1301
Score = 31.1 bits (67), Expect = 2.4
Identities = 14/44 (31%), Positives = 23/44 (52%)
Frame = +1
Query: 229 TPIRSEIIIMATRTQSVLGEKGRRIRELTSXVQKRFNIPEQSVE 360
T ++ + + +LG+ G+R+RE+ R NIP QS E
Sbjct: 167 TQASRQVTVPREHFRVILGKGGQRLREIERVTATRINIPSQSDE 210
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 32,955,525
Number of Sequences: 53049
Number of extensions: 598085
Number of successful extensions: 2250
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 1383
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2249
length of database: 24,988,368
effective HSP length: 85
effective length of database: 20,479,203
effective search space used: 4792133502
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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