Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP26_F_J14
(959 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U39851-9|AAF99870.1| 247|Caenorhabditis elegans Ribosomal prote... 176 2e-44
Z34802-8|CAH10787.1| 704|Caenorhabditis elegans Hypothetical pr... 30 2.8
Z34802-7|CAA84338.2| 828|Caenorhabditis elegans Hypothetical pr... 30 2.8
U40030-4|AAS80338.1| 909|Caenorhabditis elegans Hypothetical pr... 30 2.8
U40030-3|AAS80339.1| 911|Caenorhabditis elegans Hypothetical pr... 30 2.8
AL034393-1|CAA22308.1| 1634|Caenorhabditis elegans Hypothetical ... 30 2.8
Z69904-9|CAH60797.1| 2101|Caenorhabditis elegans Hypothetical pr... 29 4.9
Z69904-8|CAD57719.1| 2392|Caenorhabditis elegans Hypothetical pr... 29 4.9
Z69904-7|CAB54502.2| 2407|Caenorhabditis elegans Hypothetical pr... 29 4.9
Z69904-6|CAB54501.3| 2211|Caenorhabditis elegans Hypothetical pr... 29 4.9
Z66511-12|CAH60796.1| 2101|Caenorhabditis elegans Hypothetical p... 29 4.9
Z66511-11|CAD57694.1| 2392|Caenorhabditis elegans Hypothetical p... 29 4.9
Z66511-10|CAB54211.2| 2407|Caenorhabditis elegans Hypothetical p... 29 4.9
Z66511-9|CAB54210.3| 2211|Caenorhabditis elegans Hypothetical pr... 29 4.9
>U39851-9|AAF99870.1| 247|Caenorhabditis elegans Ribosomal protein,
small subunitprotein 3 protein.
Length = 247
Score = 176 bits (428), Expect = 2e-44
Identities = 84/105 (80%), Positives = 94/105 (89%)
Frame = +1
Query: 202 GYSGVEVRVTPIRSEIIIMATRTQSVLGEKGRRIRELTSXVQKRFNIPEQSVELYAEKVA 381
GYSGVEVR TP R+E+IIMATRTQ+VLGE+GRRI+ELTS VQKRF E SVELYAEKV+
Sbjct: 35 GYSGVEVRSTPARAEVIIMATRTQNVLGERGRRIKELTSVVQKRFGFEEGSVELYAEKVS 94
Query: 382 TRGLCAIAQXESLRYKLIGGLXVRRACYGVLRFIMESGARGCEVV 516
RGLCA+AQ ESLRYKL+GGL VRRACYGVLRFIMESGA+G EV+
Sbjct: 95 NRGLCAVAQCESLRYKLVGGLAVRRACYGVLRFIMESGAQGVEVI 139
Score = 52.8 bits (121), Expect = 4e-07
Identities = 25/40 (62%), Positives = 30/40 (75%)
Frame = +2
Query: 506 VKL*VSGKLRGXRAKSMKXVXGLMIHSGXPCHDXVNTATR 625
V++ VSGKLRG RAK+MK V GLMIHSG P +D + A R
Sbjct: 136 VEVIVSGKLRGQRAKAMKFVDGLMIHSGHPVNDYIQQAVR 175
>Z34802-8|CAH10787.1| 704|Caenorhabditis elegans Hypothetical
protein M88.5b protein.
Length = 704
Score = 29.9 bits (64), Expect = 2.8
Identities = 15/63 (23%), Positives = 29/63 (46%)
Frame = +1
Query: 163 NSMSSSLGSWPRHGYSGVEVRVTPIRSEIIIMATRTQSVLGEKGRRIRELTSXVQKRFNI 342
+ ++ + S P G G + IR+E+ + ++G+ G+ +REL I
Sbjct: 534 SKIAETSSSLPSSGMDGDRSHMLRIRTEVSVPTRIIGRIIGKGGQNVRELQRITGAVVKI 593
Query: 343 PEQ 351
PE+
Sbjct: 594 PEE 596
>Z34802-7|CAA84338.2| 828|Caenorhabditis elegans Hypothetical
protein M88.5a protein.
Length = 828
Score = 29.9 bits (64), Expect = 2.8
Identities = 15/63 (23%), Positives = 29/63 (46%)
Frame = +1
Query: 163 NSMSSSLGSWPRHGYSGVEVRVTPIRSEIIIMATRTQSVLGEKGRRIRELTSXVQKRFNI 342
+ ++ + S P G G + IR+E+ + ++G+ G+ +REL I
Sbjct: 658 SKIAETSSSLPSSGMDGDRSHMLRIRTEVSVPTRIIGRIIGKGGQNVRELQRITGAVVKI 717
Query: 343 PEQ 351
PE+
Sbjct: 718 PEE 720
>U40030-4|AAS80338.1| 909|Caenorhabditis elegans Hypothetical
protein T13C2.6a protein.
Length = 909
Score = 29.9 bits (64), Expect = 2.8
Identities = 13/39 (33%), Positives = 21/39 (53%)
Frame = +2
Query: 266 GHRVCSERKDAESVSSLP*YRSDSTFQSNL*NCMLKRWL 382
G R C+ KD ++ +S D+ FQ + NC+ K W+
Sbjct: 146 GQRDCTNGKDEQNCTSKTSKCPDNNFQCSNGNCIFKNWV 184
>U40030-3|AAS80339.1| 911|Caenorhabditis elegans Hypothetical
protein T13C2.6b protein.
Length = 911
Score = 29.9 bits (64), Expect = 2.8
Identities = 13/39 (33%), Positives = 21/39 (53%)
Frame = +2
Query: 266 GHRVCSERKDAESVSSLP*YRSDSTFQSNL*NCMLKRWL 382
G R C+ KD ++ +S D+ FQ + NC+ K W+
Sbjct: 148 GQRDCTNGKDEQNCTSKTSKCPDNNFQCSNGNCIFKNWV 186
>AL034393-1|CAA22308.1| 1634|Caenorhabditis elegans Hypothetical
protein Y18D10A.1 protein.
Length = 1634
Score = 29.9 bits (64), Expect = 2.8
Identities = 13/40 (32%), Positives = 25/40 (62%)
Frame = +1
Query: 268 TQSVLGEKGRRIRELTSXVQKRFNIPEQSVELYAEKVATR 387
+ S+ G+KG+ +REL + + K ++ E++ + AE A R
Sbjct: 396 SSSIHGKKGKTVRELQTEMMKGESVKEKAARMRAEASAGR 435
>Z69904-9|CAH60797.1| 2101|Caenorhabditis elegans Hypothetical
protein F07A11.6e protein.
Length = 2101
Score = 29.1 bits (62), Expect = 4.9
Identities = 14/30 (46%), Positives = 17/30 (56%)
Frame = +1
Query: 157 GQNSMSSSLGSWPRHGYSGVEVRVTPIRSE 246
G +S+SSS S PRH SG V P S+
Sbjct: 622 GTHSVSSSAHSTPRHSISGTPVHCEPSNSK 651
>Z69904-8|CAD57719.1| 2392|Caenorhabditis elegans Hypothetical protein
F07A11.6c protein.
Length = 2392
Score = 29.1 bits (62), Expect = 4.9
Identities = 14/30 (46%), Positives = 17/30 (56%)
Frame = +1
Query: 157 GQNSMSSSLGSWPRHGYSGVEVRVTPIRSE 246
G +S+SSS S PRH SG V P S+
Sbjct: 913 GTHSVSSSAHSTPRHSISGTPVHCEPSNSK 942
>Z69904-7|CAB54502.2| 2407|Caenorhabditis elegans Hypothetical protein
F07A11.6b protein.
Length = 2407
Score = 29.1 bits (62), Expect = 4.9
Identities = 14/30 (46%), Positives = 17/30 (56%)
Frame = +1
Query: 157 GQNSMSSSLGSWPRHGYSGVEVRVTPIRSE 246
G +S+SSS S PRH SG V P S+
Sbjct: 928 GTHSVSSSAHSTPRHSISGTPVHCEPSNSK 957
>Z69904-6|CAB54501.3| 2211|Caenorhabditis elegans Hypothetical protein
F07A11.6a protein.
Length = 2211
Score = 29.1 bits (62), Expect = 4.9
Identities = 14/30 (46%), Positives = 17/30 (56%)
Frame = +1
Query: 157 GQNSMSSSLGSWPRHGYSGVEVRVTPIRSE 246
G +S+SSS S PRH SG V P S+
Sbjct: 928 GTHSVSSSAHSTPRHSISGTPVHCEPSNSK 957
>Z66511-12|CAH60796.1| 2101|Caenorhabditis elegans Hypothetical
protein F07A11.6e protein.
Length = 2101
Score = 29.1 bits (62), Expect = 4.9
Identities = 14/30 (46%), Positives = 17/30 (56%)
Frame = +1
Query: 157 GQNSMSSSLGSWPRHGYSGVEVRVTPIRSE 246
G +S+SSS S PRH SG V P S+
Sbjct: 622 GTHSVSSSAHSTPRHSISGTPVHCEPSNSK 651
>Z66511-11|CAD57694.1| 2392|Caenorhabditis elegans Hypothetical
protein F07A11.6c protein.
Length = 2392
Score = 29.1 bits (62), Expect = 4.9
Identities = 14/30 (46%), Positives = 17/30 (56%)
Frame = +1
Query: 157 GQNSMSSSLGSWPRHGYSGVEVRVTPIRSE 246
G +S+SSS S PRH SG V P S+
Sbjct: 913 GTHSVSSSAHSTPRHSISGTPVHCEPSNSK 942
>Z66511-10|CAB54211.2| 2407|Caenorhabditis elegans Hypothetical
protein F07A11.6b protein.
Length = 2407
Score = 29.1 bits (62), Expect = 4.9
Identities = 14/30 (46%), Positives = 17/30 (56%)
Frame = +1
Query: 157 GQNSMSSSLGSWPRHGYSGVEVRVTPIRSE 246
G +S+SSS S PRH SG V P S+
Sbjct: 928 GTHSVSSSAHSTPRHSISGTPVHCEPSNSK 957
>Z66511-9|CAB54210.3| 2211|Caenorhabditis elegans Hypothetical protein
F07A11.6a protein.
Length = 2211
Score = 29.1 bits (62), Expect = 4.9
Identities = 14/30 (46%), Positives = 17/30 (56%)
Frame = +1
Query: 157 GQNSMSSSLGSWPRHGYSGVEVRVTPIRSE 246
G +S+SSS S PRH SG V P S+
Sbjct: 928 GTHSVSSSAHSTPRHSISGTPVHCEPSNSK 957
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,010,301
Number of Sequences: 27780
Number of extensions: 279775
Number of successful extensions: 626
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 609
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 626
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2496624284
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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