Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP26_F_I24
(911 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
01_06_0824 - 32243495-32244319,32244449-32244859 56 4e-08
11_02_0011 - 7337618-7338496,7338596-7338991 42 5e-04
11_01_0750 - 6315126-6315896,6316371-6316784 40 0.002
11_02_0012 - 7346282-7347136,7347234-7347593 40 0.004
03_05_0293 + 22849103-22849513,22849670-22849756,22850156-228502... 38 0.008
03_05_0294 + 22855503-22855946,22856346-22856399 34 0.14
11_01_0767 + 6438648-6438809,6439146-6440000 33 0.31
09_06_0317 - 22265786-22267618,22267874-22268446,22268546-222686... 31 1.7
06_01_0059 - 510856-511499,511595-511805 29 5.1
11_01_0771 + 6453130-6454488 28 9.0
01_06_1263 + 35840502-35841308,35841763-35841969,35842272-358423... 28 9.0
>01_06_0824 - 32243495-32244319,32244449-32244859
Length = 411
Score = 56.0 bits (129), Expect = 4e-08
Identities = 42/151 (27%), Positives = 74/151 (49%), Gaps = 10/151 (6%)
Frame = +1
Query: 241 DKNVIASPLGVMLLLSLYESGAGAQSKEEIREILG--GGEAQESTHTYGLLNQRYAEFDP 414
DKN+ SPL + L+L +GA ++ ++I LG GG A + ++ L + P
Sbjct: 31 DKNLAVSPLSLHAALALLGAGARGETLDQIIAFLGPAGGPAHAALASHVALCSLADDSGP 90
Query: 415 ------KFLTVANKIYVSDQYKLADAFSR-TANLFRSEVDNINF-SAPKNAADIINRWAD 570
+ AN ++V +L A++R A+ +R+E ++F + A IN W +
Sbjct: 91 GDDRGGPKVRFANGVWVDAALRLKAAYARVVADKYRAEARPVSFRDKLEEARREINEWFE 150
Query: 571 EQTQGHIKTPVSEDKIDPATAVAMFNVIFFQ 663
T G IK + +D +D AT + N ++F+
Sbjct: 151 SATAGRIKDFLPKDAVDRATPAVLGNALYFK 181
>11_02_0011 - 7337618-7338496,7338596-7338991
Length = 424
Score = 42.3 bits (95), Expect = 5e-04
Identities = 35/152 (23%), Positives = 73/152 (48%), Gaps = 8/152 (5%)
Frame = +1
Query: 232 LADDKNVIASPLGVMLLLSLYESGAGAQSKEEIREILGGG---EAQESTHT---YGLLNQ 393
++ +KN++ SP + L+L +GA + +E+ +LG + +ES GL ++
Sbjct: 27 VSSNKNLVFSPASLYAALALVAAGARGTTLDELLALLGAASLDDLEESVRRAVEVGLADE 86
Query: 394 RYAEFDPKFLTVANKIYVSDQYKLADAF-SRTANLFRSEVDNINFSA-PKNAADIINRWA 567
A P+ ++ A ++ + +L A+ + A +++ NF PK + IN+W
Sbjct: 87 S-ASGGPR-VSDACGVWHDETLELKPAYRAAAAGTYKAVTRAANFQRQPKRSRKKINKWV 144
Query: 568 DEQTQGHIKTPVSEDKIDPATAVAMFNVIFFQ 663
+ T I + + + TA+ + N I+F+
Sbjct: 145 SKATNKLIPEILPDGSVHVDTALVLVNAIYFK 176
Score = 30.3 bits (65), Expect = 2.2
Identities = 12/23 (52%), Positives = 17/23 (73%)
Frame = +3
Query: 834 GFRMVVXLPDKIDGLPAVLEKXA 902
G M + LPD+ DGLPA+++K A
Sbjct: 261 GLSMYIFLPDERDGLPALVDKMA 283
>11_01_0750 - 6315126-6315896,6316371-6316784
Length = 394
Score = 40.3 bits (90), Expect = 0.002
Identities = 37/151 (24%), Positives = 65/151 (43%), Gaps = 12/151 (7%)
Frame = +1
Query: 247 NVIASPLGVMLLLSLYESGAGAQSKEEIREILG------GGEAQE----STHTYGLLNQR 396
N S V + L+L GA ++ ++ + LG GG A S +L R
Sbjct: 33 NAAVSAPAVHVSLALAAGGARGATRRQVLQALGCGGGGRGGAADAANVASRVVKRVLRDR 92
Query: 397 YAEFDPKFLTVANKIYVSDQYKLADAFSRTA-NLFRSEVDNINF-SAPKNAADIINRWAD 570
P+ L A ++ L+ F A N++ S +F + P++A D IN W
Sbjct: 93 STSGGPR-LAFAGGVWADASRSLSPEFVGLAGNVYGSAAKKADFKNKPEDAPDQINSWVK 151
Query: 571 EQTQGHIKTPVSEDKIDPATAVAMFNVIFFQ 663
+ T+G + T + ID T + + + ++F+
Sbjct: 152 DSTKGTVTTLLPAGTIDQNTGLVLGSALYFR 182
>11_02_0012 - 7346282-7347136,7347234-7347593
Length = 404
Score = 39.5 bits (88), Expect = 0.004
Identities = 40/161 (24%), Positives = 76/161 (47%), Gaps = 11/161 (6%)
Frame = +1
Query: 214 LKESYNLADD-----KNVIASPLGVMLLLSLYESGAGAQSKEEIREILGGG---EAQEST 369
L+ + LADD +NV+ SP+ + L+L SGA + +E+ +LG + +ES
Sbjct: 16 LRLAKRLADDGDNSNRNVVFSPVSLYAALALVASGARGTTLDELVALLGAASLDDLEESV 75
Query: 370 HT---YGLLNQRYAEFDPKFLTVANKIYVSDQYKLADAFSRTANLFRSEVDNINFSAPKN 540
GL ++ +E ++ A ++ ++ L A+ R A+ R PK+
Sbjct: 76 RRAVEVGLADE--SESGGPRVSYACGVWHDERLALKPAY-RAADFQRQ---------PKS 123
Query: 541 AADIINRWADEQTQGHIKTPVSEDKIDPATAVAMFNVIFFQ 663
+ IN+W + T I+ + + + TA+ + N I+F+
Sbjct: 124 SRKKINKWVSKATNKLIREILPDGSVHGGTALVLVNAIYFK 164
Score = 29.5 bits (63), Expect = 3.9
Identities = 12/23 (52%), Positives = 16/23 (69%)
Frame = +3
Query: 834 GFRMVVXLPDKIDGLPAVLEKXA 902
G M + LPD DGLPA+++K A
Sbjct: 241 GLSMYIFLPDARDGLPALVDKMA 263
>03_05_0293 +
22849103-22849513,22849670-22849756,22850156-22850284,
22850507-22851262,22853474-22854250
Length = 719
Score = 38.3 bits (85), Expect = 0.008
Identities = 29/115 (25%), Positives = 53/115 (46%), Gaps = 12/115 (10%)
Frame = +1
Query: 244 KNVIASPLGVMLLLSLYESGAGAQSKEEIREILGGGEAQESTHTYG------LLNQRYAE 405
+NV SPL + + LSL +GAG +++++ LGG + E H + +L
Sbjct: 35 RNVAFSPLSLHVALSLVAAGAGGATRDQLASALGGPGSAEGLHAFAEQLVQLVLADASGA 94
Query: 406 FDPKFLTVANKIYVSDQYKLADAFSRTA-NLFRSEVDNINFSA-----PKNAADI 552
P+ + A+ ++V L F A +++E +++F P N A+I
Sbjct: 95 GGPR-VAFADGVFVDASLSLKKTFGDVAVGKYKAETHSVDFQTKWLLLPSNLANI 148
>03_05_0294 + 22855503-22855946,22856346-22856399
Length = 165
Score = 34.3 bits (75), Expect = 0.14
Identities = 25/105 (23%), Positives = 50/105 (47%), Gaps = 8/105 (7%)
Frame = +1
Query: 235 ADDKNVIASPLGVMLLLSLYESGAGAQSKEEIREILG--GGEAQESTHTYG--LLNQRYA 402
A NV SPL + + LSL +GAG +++++ +LG G E H + ++ A
Sbjct: 41 AGGSNVAFSPLSLHVALSLVAAGAGGATRDQLVSLLGVPGRGTAEGLHAFAEQVVQLVLA 100
Query: 403 EFDP---KFLTVANKIYVSDQYKLADAFSRTA-NLFRSEVDNINF 525
+ P + A+ +++ L +F A +++E +++F
Sbjct: 101 DSSPAGGPRVAFADGVFIDSSLSLMKSFKDVAVGKYKAETHSVDF 145
>11_01_0767 + 6438648-6438809,6439146-6440000
Length = 338
Score = 33.1 bits (72), Expect = 0.31
Identities = 14/27 (51%), Positives = 18/27 (66%)
Frame = +3
Query: 816 LPYKEPGFRMVVXLPDKIDGLPAVLEK 896
L Y P F M+V LPD DGLP +L++
Sbjct: 162 LRYSLPSFAMLVFLPDDRDGLPGLLDR 188
>09_06_0317 -
22265786-22267618,22267874-22268446,22268546-22268677,
22268931-22269137,22269287-22269388,22270742-22271032
Length = 1045
Score = 30.7 bits (66), Expect = 1.7
Identities = 14/31 (45%), Positives = 17/31 (54%)
Frame = -2
Query: 364 TLEPPLPQGFPLSLPWTVHRLQTRTRKAAAS 272
+L PPLP G PLS P+ QT + A S
Sbjct: 751 SLRPPLPPGLPLSSPFVCPTTQTSEKAAPLS 781
>06_01_0059 - 510856-511499,511595-511805
Length = 284
Score = 29.1 bits (62), Expect = 5.1
Identities = 22/72 (30%), Positives = 34/72 (47%), Gaps = 3/72 (4%)
Frame = +1
Query: 274 MLLLSLYESGAGAQSKEEIREILGGGEAQESTHTYGLLNQRYAEFD-PKFLTVANKIYVS 450
+LL + GAG S ++ GGG ++ H +G+ Q +A D LTV Y +
Sbjct: 197 LLLYVMNVGGAGDVSSLSVKTSGGGGAWIQAAHNWGITYQVFAALDNSDGLTVKLTTYST 256
Query: 451 DQYKL--ADAFS 480
Q + +DA S
Sbjct: 257 PQQTIIVSDAIS 268
>11_01_0771 + 6453130-6454488
Length = 452
Score = 28.3 bits (60), Expect = 9.0
Identities = 14/40 (35%), Positives = 21/40 (52%)
Frame = +1
Query: 244 KNVIASPLGVMLLLSLYESGAGAQSKEEIREILGGGEAQE 363
+N+ SPL V LSL +GA + +EI +LG +
Sbjct: 37 RNLAFSPLSVHAALSLAAAGAAGGTLDEILAVLGAASRDD 76
>01_06_1263 +
35840502-35841308,35841763-35841969,35842272-35842370,
35843361-35843464,35844521-35844698,35844774-35845244,
35845383-35845523,35846290-35846349,35846427-35846490,
35847295-35847524,35847606-35847704
Length = 819
Score = 28.3 bits (60), Expect = 9.0
Identities = 20/80 (25%), Positives = 35/80 (43%)
Frame = +2
Query: 335 KSLGEGRLKSQHTHTDY*ISVTQNSTRNS*LSPIKYTFPTSISWPTRSPEQRICSEAKWT 514
K+ +G L +++ + + + +N T + S K P S S RSP +R S +
Sbjct: 375 KATADGILHTKNWDIEPLVPLPENITSTNLTSSAKDLSPFSFSTSRRSPSRRAKSRWEPV 434
Query: 515 TLTSALRRMPLISSTVGRTN 574
++ LIS +TN
Sbjct: 435 VEEKVANKVELISKESAKTN 454
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,821,614
Number of Sequences: 37544
Number of extensions: 505785
Number of successful extensions: 1457
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 1390
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1456
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2588957540
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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