Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP26_F_I11
(880 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
03_05_0177 + 21557762-21559658,21563481-21563623,21564230-21564559 33 0.40
07_01_0313 + 2216498-2216953 32 0.70
03_05_0780 + 27646936-27647084,27647168-27647289,27649380-276494... 31 1.6
09_06_0277 - 21983049-21983080,21983250-21984788,21986619-219866... 29 3.7
02_03_0221 - 16554910-16555560 29 3.7
07_03_0600 + 19866757-19867218,19867920-19868429 29 4.9
04_04_0138 + 23067885-23068245,23068393-23068634 29 4.9
07_01_0310 + 2209084-2209554 29 6.5
03_05_0864 - 28362146-28362500,28362585-28362629,28362727-28363085 29 6.5
01_01_0487 - 3591171-3592313,3593522-3593800,3594688-3595008 29 6.5
12_02_0233 - 16023062-16023253,16023528-16023609,16023699-160238... 28 8.6
10_06_0036 - 9914606-9915561,9916287-9916368 28 8.6
06_03_0436 + 20755816-20756025,20756124-20756240,20756942-207571... 28 8.6
>03_05_0177 + 21557762-21559658,21563481-21563623,21564230-21564559
Length = 789
Score = 32.7 bits (71), Expect = 0.40
Identities = 18/46 (39%), Positives = 21/46 (45%)
Frame = +3
Query: 201 HRLNKIRLRYNNQTQPGLYPAVPSVTPAPPQQFVTVVPAQQMGPEP 338
HR N+ R+ NQT PG P P PP F P GP+P
Sbjct: 745 HRSNQAMPRWENQTIPG----PPVYFPVPPPYFGHYNPYHPFGPQP 786
>07_01_0313 + 2216498-2216953
Length = 151
Score = 31.9 bits (69), Expect = 0.70
Identities = 18/47 (38%), Positives = 23/47 (48%)
Frame = +3
Query: 258 PAVPSVTPAPPQQFVTVVPAQQMGPEPTNTSCPSCSAAIVTRVDHVP 398
PAVP VT PP + VPA M P P + P+ + + V VP
Sbjct: 67 PAVPKVT-LPPMPAIPTVPAVTMPPMPAVPAVPAVTLPPMPAVPTVP 112
>03_05_0780 +
27646936-27647084,27647168-27647289,27649380-27649458,
27650346-27650427,27650483-27650600,27650695-27651050,
27651404-27652222,27652846-27653265,27653426-27653437
Length = 718
Score = 30.7 bits (66), Expect = 1.6
Identities = 21/82 (25%), Positives = 39/82 (47%), Gaps = 5/82 (6%)
Frame = +3
Query: 180 ICLACTTHR---LNKIRLRYNNQTQPGLYPAVPSVTPAPPQQFVTVVPAQQMGPE--PTN 344
+C C +HR L++ RL + + P P PS P+PP + P++ + P P
Sbjct: 378 LCRPCLSHRTGLLHRTRLSHRSGLPPLAAPLAPSRPPSPPP--APLAPSRPLLPSAVPLC 435
Query: 345 TSCPSCSAAIVTRVDHVPVTKT 410
T S +++++R + + T
Sbjct: 436 TKPVSDPSSVLSRTGQMQPSAT 457
>09_06_0277 -
21983049-21983080,21983250-21984788,21986619-21986655,
21987612-21987665,21987781-21987893,21988272-21988660,
21988783-21988903,21989245-21989342,21989963-21990153
Length = 857
Score = 29.5 bits (63), Expect = 3.7
Identities = 14/38 (36%), Positives = 20/38 (52%)
Frame = +3
Query: 246 PGLYPAVPSVTPAPPQQFVTVVPAQQMGPEPTNTSCPS 359
P +YP+ P VTP+PP+ P + + P T PS
Sbjct: 430 PVVYPSPPEVTPSPPEIAPYPSPPEIVPSPPEITPYPS 467
Score = 28.7 bits (61), Expect = 6.5
Identities = 14/38 (36%), Positives = 19/38 (50%)
Frame = +3
Query: 246 PGLYPAVPSVTPAPPQQFVTVVPAQQMGPEPTNTSCPS 359
P +YP+ P VTP+PP+ P + P T PS
Sbjct: 554 PIIYPSPPEVTPSPPEITPYPSPPEVTPGPPEITPYPS 591
>02_03_0221 - 16554910-16555560
Length = 216
Score = 29.5 bits (63), Expect = 3.7
Identities = 13/26 (50%), Positives = 15/26 (57%), Gaps = 1/26 (3%)
Frame = +3
Query: 420 ALLLCLIGCCPCACIPYC-TDSCKDA 494
AL CL+G C C C TDS +DA
Sbjct: 78 ALTACLVGACALCCFLLCFTDSYRDA 103
>07_03_0600 + 19866757-19867218,19867920-19868429
Length = 323
Score = 29.1 bits (62), Expect = 4.9
Identities = 14/33 (42%), Positives = 17/33 (51%)
Frame = +3
Query: 258 PAVPSVTPAPPQQFVTVVPAQQMGPEPTNTSCP 356
P P P PPQQF +P QQ P P + + P
Sbjct: 76 PPPPQYAPPPPQQF--QLPHQQYAPPPQHYAPP 106
>04_04_0138 + 23067885-23068245,23068393-23068634
Length = 200
Score = 29.1 bits (62), Expect = 4.9
Identities = 18/46 (39%), Positives = 23/46 (50%), Gaps = 2/46 (4%)
Frame = +3
Query: 270 SVTPAPPQQF-VTVVPAQQMGPEP-TNTSCPSCSAAIVTRVDHVPV 401
S P+ P VT P QQM P P T++ P S+ + D VPV
Sbjct: 142 STAPSTPTPVTVTRAPPQQMTPSPKTSSQTPEYSSGLKLIADCVPV 187
>07_01_0310 + 2209084-2209554
Length = 156
Score = 28.7 bits (61), Expect = 6.5
Identities = 13/36 (36%), Positives = 20/36 (55%)
Frame = +3
Query: 258 PAVPSVTPAPPQQFVTVVPAQQMGPEPTNTSCPSCS 365
PAVP+VT PP + +PA + P P + P+ +
Sbjct: 23 PAVPAVT-LPPMPAIPAIPAATLPPIPAVPTVPNAA 57
>03_05_0864 - 28362146-28362500,28362585-28362629,28362727-28363085
Length = 252
Score = 28.7 bits (61), Expect = 6.5
Identities = 18/60 (30%), Positives = 24/60 (40%), Gaps = 4/60 (6%)
Frame = +3
Query: 258 PAVPSVTPAPPQQFVTVVPAQQMG----PEPTNTSCPSCSAAIVTRVDHVPVTKTHLFAL 425
P PS P P QQ T P QQ P+ P+ +A+ D V + T F +
Sbjct: 28 PRPPSAQPPPEQQPPTPTPTQQQSMQAQPQARPRRAPAAAASGADSTDWVATSLTRRFGI 87
>01_01_0487 - 3591171-3592313,3593522-3593800,3594688-3595008
Length = 580
Score = 28.7 bits (61), Expect = 6.5
Identities = 13/41 (31%), Positives = 19/41 (46%)
Frame = +3
Query: 246 PGLYPAVPSVTPAPPQQFVTVVPAQQMGPEPTNTSCPSCSA 368
P P P++ PP Q+ +P Q+ P P + PS A
Sbjct: 277 PNAPPPPPTLQSQPPSQYPGHLPHSQVPPVPPSAPVPSVPA 317
>12_02_0233 -
16023062-16023253,16023528-16023609,16023699-16023809,
16023890-16024141,16024227-16024580,16024893-16025548,
16025554-16026459,16026550-16026747
Length = 916
Score = 28.3 bits (60), Expect = 8.6
Identities = 13/34 (38%), Positives = 16/34 (47%)
Frame = +3
Query: 258 PAVPSVTPAPPQQFVTVVPAQQMGPEPTNTSCPS 359
PA S TP+ Q PA + PEP + PS
Sbjct: 548 PAAGSSTPSSSQAMTAAAPAPPLPPEPPSPRHPS 581
>10_06_0036 - 9914606-9915561,9916287-9916368
Length = 345
Score = 28.3 bits (60), Expect = 8.6
Identities = 17/52 (32%), Positives = 24/52 (46%)
Frame = +3
Query: 216 IRLRYNNQTQPGLYPAVPSVTPAPPQQFVTVVPAQQMGPEPTNTSCPSCSAA 371
+ L + P + P+VP APP V VVPA P + + P +AA
Sbjct: 177 VPLSFAPNAPPEVVPSVPPAA-APPSTPVVVVPAPATSPPMSMPATPPEAAA 227
>06_03_0436 +
20755816-20756025,20756124-20756240,20756942-20757137,
20757393-20757544,20757653-20757736,20757848-20757925,
20757958-20758116,20758219-20758251,20759119-20759826,
20759917-20759998,20760093-20760449,20760586-20760692,
20760796-20761001,20761480-20761623,20761715-20761800,
20762120-20762283,20762559-20763119
Length = 1147
Score = 28.3 bits (60), Expect = 8.6
Identities = 14/33 (42%), Positives = 20/33 (60%)
Frame = +3
Query: 537 NR*IFQLVQ*IINCKNNILVLLFNSILSYELSI 635
NR +F VQ + CK N + L+ IL+Y+L I
Sbjct: 627 NRKLFNEVQELKGCKANSIAHLYADILNYQLLI 659
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,640,241
Number of Sequences: 37544
Number of extensions: 452305
Number of successful extensions: 1604
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 1440
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1597
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2479731924
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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