Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP26_F_I09
(894 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC947.07 |||ribosome biogenesis protein Rrp14-C|Schizosaccharo... 34 0.031
SPAC17C9.03 |tif471||translation initiation factor eIF4G |Schizo... 31 0.17
SPAC1B3.05 |||CCR4-Not complex subunit Not3/5 |Schizosaccharomyc... 31 0.29
SPAC27D7.02c |||GRIP domain protein|Schizosaccharomyces pombe|ch... 30 0.39
SPAC22G7.05 |||krr family protein|Schizosaccharomyces pombe|chr ... 28 1.6
SPAC3G9.01 |||sequence orphan|Schizosaccharomyces pombe|chr 1|||... 27 2.7
SPAC1556.06.1 |meu1|SPAC1556.06a, SPAC1556.06|sequence orphan|Sc... 27 2.7
SPAC3C7.12 |tip1|noc1|CLIP170 family protein Tip1|Schizosaccharo... 27 2.7
SPAC6F6.03c |||ribosome export GTPase|Schizosaccharomyces pombe|... 27 3.6
SPAC1834.07 |klp3|krp1|kinesin-like protein Klp3|Schizosaccharom... 27 3.6
SPBC146.03c |cut3|smc4, smc4|condensin subunit Cut3|Schizosaccha... 26 6.3
SPBPB8B6.02c |||urea transporter |Schizosaccharomyces pombe|chr ... 26 6.3
SPAC24B11.10c |chr3|cfh1|chitin synthase regulatory factor Chr3 ... 26 8.3
SPAC22F3.11c |snu23||U4/U6 x U5 tri-snRNP complex subunit Snu23|... 26 8.3
SPBC2A9.07c |||zf-PARP-type zinc finger protein|Schizosaccharomy... 26 8.3
>SPBC947.07 |||ribosome biogenesis protein
Rrp14-C|Schizosaccharomyces pombe|chr 2|||Manual
Length = 233
Score = 33.9 bits (74), Expect = 0.031
Identities = 21/64 (32%), Positives = 34/64 (53%)
Frame = +3
Query: 525 EEKRQRLEEAEKKRQAMLQAMKDASKTGPNFTIQKKSENFGLSNAQLERNKTKEQLEEEK 704
EEKR+++EE++K + +LQA + K N + KKS + + KE+ + EK
Sbjct: 138 EEKRRKIEESDKWHRVLLQA--EGKKLKDNEQLLKKSIRRKEKEKKKSSDAWKERKDNEK 195
Query: 705 KISL 716
K L
Sbjct: 196 KAML 199
>SPAC17C9.03 |tif471||translation initiation factor eIF4G
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1403
Score = 31.5 bits (68), Expect = 0.17
Identities = 29/115 (25%), Positives = 52/115 (45%), Gaps = 1/115 (0%)
Frame = +3
Query: 519 DIEEKRQRLEEAEKKRQAMLQAMKDASKTGPNFTIQKKSENFGLSNAQLE-RNKTKEQLE 695
+ EEK +R E + KR+A +A ++A + ++K++ A+ E K K + E
Sbjct: 572 EAEEKAKREAEEKAKREAEEKAKREAEENAKR-EAEEKAKREAEEKAKREAEEKAKREAE 630
Query: 696 EEKKISLSIRIKPLTIEGLSVDKLRQKARNSGSASFXLETEKYDLXREAKETGLR 860
E+ K + K E + + +KA+ + E E+ REA+E R
Sbjct: 631 EKAKREAEEKAK-REAEEKAKREAEEKAKREAEENAKREAEE-KAKREAEENAKR 683
Score = 31.1 bits (67), Expect = 0.22
Identities = 22/77 (28%), Positives = 38/77 (49%), Gaps = 1/77 (1%)
Frame = +3
Query: 519 DIEEKRQRLEEAEKKRQAMLQAMKDASKTGPNFTIQKKSENFGLSNAQLE-RNKTKEQLE 695
+ EEK +R E + KR+A +A ++A + ++K++ NA+ E K K + E
Sbjct: 620 EAEEKAKREAEEKAKREAEEKAKREAEEKAKR-EAEEKAKREAEENAKREAEEKAKREAE 678
Query: 696 EEKKISLSIRIKPLTIE 746
E K ++K T E
Sbjct: 679 ENAKREAEEKVKRETEE 695
Score = 29.5 bits (63), Expect = 0.67
Identities = 19/64 (29%), Positives = 33/64 (51%), Gaps = 1/64 (1%)
Frame = +3
Query: 519 DIEEKRQRLEEAEKKRQAMLQAMKDASKTGPNFTIQKKSENFGLSNAQLE-RNKTKEQLE 695
+ EEK +R E + KR+A +A ++A + ++K++ NA+ E K K + E
Sbjct: 636 EAEEKAKREAEEKAKREAEEKAKREAEENAKR-EAEEKAKREAEENAKREAEEKVKRETE 694
Query: 696 EEKK 707
E K
Sbjct: 695 ENAK 698
Score = 27.9 bits (59), Expect = 2.1
Identities = 31/113 (27%), Positives = 49/113 (43%), Gaps = 2/113 (1%)
Frame = +3
Query: 528 EKRQRLEEAEK-KRQAMLQAMKDASKTGPNFTIQK-KSENFGLSNAQLERNKTKEQLEEE 701
E++ RLE E KR+A QA ++A + +K K E + + E N K + EE+
Sbjct: 550 EEKARLEAEENAKREAEEQAKREAEEKAKREAEEKAKREAEEKAKREAEEN-AKREAEEK 608
Query: 702 KKISLSIRIKPLTIEGLSVDKLRQKARNSGSASFXLETEKYDLXREAKETGLR 860
K + K E + + +KA+ E E+ REA+E R
Sbjct: 609 AKREAEEKAK-REAEEKAKREAEEKAKREAEEKAKREAEE-KAKREAEEKAKR 659
>SPAC1B3.05 |||CCR4-Not complex subunit Not3/5 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 630
Score = 30.7 bits (66), Expect = 0.29
Identities = 28/107 (26%), Positives = 50/107 (46%), Gaps = 2/107 (1%)
Frame = +3
Query: 531 KRQRLEEAEKKRQAMLQAMKDASKTGPNFTIQKKSENFGLSNAQLERNKTKE-QLEEEKK 707
++++LE K + LQ ++D KT + S + A LE + E ++EE K
Sbjct: 29 QKEKLEGDLKTQIKKLQRLRDQIKTWAS------SNDIKDKKALLENRRLIEAKMEEFKA 82
Query: 708 ISLSIRIKPLTIEGLSV-DKLRQKARNSGSASFXLETEKYDLXREAK 845
+ ++IK + EGLS+ KL K + + +L R+A+
Sbjct: 83 VEREMKIKAFSKEGLSIASKLDPKEKEKQDTIQWISNAVEELERQAE 129
>SPAC27D7.02c |||GRIP domain protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 750
Score = 30.3 bits (65), Expect = 0.39
Identities = 21/78 (26%), Positives = 38/78 (48%), Gaps = 4/78 (5%)
Frame = +3
Query: 519 DIEEKRQRLEEAEKKRQAMLQAMKD----ASKTGPNFTIQKKSENFGLSNAQLERNKTKE 686
++EEK LE A+ Q ++ ++KD +K + ++ G+S+A L + K K
Sbjct: 162 ELEEKINSLESAQSIEQEVISSLKDDKTVETKNDVPEVSRPSTDTIGVSSA-LSKKKKKR 220
Query: 687 QLEEEKKISLSIRIKPLT 740
+ +KK S I+ T
Sbjct: 221 NRKNQKKKSTKQNIEATT 238
>SPAC22G7.05 |||krr family protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 598
Score = 28.3 bits (60), Expect = 1.6
Identities = 17/54 (31%), Positives = 31/54 (57%)
Frame = +3
Query: 543 LEEAEKKRQAMLQAMKDASKTGPNFTIQKKSENFGLSNAQLERNKTKEQLEEEK 704
+EE E+ R+ + A D + G + +S+ G + +++ KTK+QLEEE+
Sbjct: 197 VEEQERLRKETIAAFHDVN--GNKDAVSNESDEDG--DFLVKKEKTKKQLEEEE 246
>SPAC3G9.01 |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 462
Score = 27.5 bits (58), Expect = 2.7
Identities = 23/100 (23%), Positives = 44/100 (44%), Gaps = 1/100 (1%)
Frame = +3
Query: 528 EKRQRLEEAEKKRQAMLQAMKDA-SKTGPNFTIQKKSENFGLSNAQLERNKTKEQLEEEK 704
+KR R + A+ +K SK+ P ++ K E + N QL +++ ++ ++
Sbjct: 277 QKRLRRLATLESSPALRSTLKSLQSKSSPVKLLKLKEEKAKIKN-QLFKSEEEKDPVGKQ 335
Query: 705 KISLSIRIKPLTIEGLSVDKLRQKARNSGSASFXLETEKY 824
K+ L + PL + + A+N + LET Y
Sbjct: 336 KLPLESSLSPLDHSSAEKEMQKAPAKNKRRRTGSLETGLY 375
>SPAC1556.06.1 |meu1|SPAC1556.06a, SPAC1556.06|sequence
orphan|Schizosaccharomyces pombe|chr 1|||Manual
Length = 776
Score = 27.5 bits (58), Expect = 2.7
Identities = 18/60 (30%), Positives = 32/60 (53%), Gaps = 3/60 (5%)
Frame = +3
Query: 531 KRQRLEEAEKKRQAMLQAMKDAS---KTGPNFTIQKKSENFGLSNAQLERNKTKEQLEEE 701
K + +++R A +QA+ D S +T + + +SEN GL N ++ +QLE+E
Sbjct: 232 KDHEILRLKEERTAAMQAIDDISGTIETIKSDCYKVESENKGLINEVMDMRNFVQQLEQE 291
>SPAC3C7.12 |tip1|noc1|CLIP170 family protein
Tip1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 461
Score = 27.5 bits (58), Expect = 2.7
Identities = 11/19 (57%), Positives = 13/19 (68%)
Frame = -3
Query: 289 SGSPSPAIDGLLSCLGAGF 233
S SPSP IDG + +G GF
Sbjct: 80 SSSPSPKIDGTAASIGMGF 98
>SPAC6F6.03c |||ribosome export GTPase|Schizosaccharomyces pombe|chr
1|||Manual
Length = 537
Score = 27.1 bits (57), Expect = 3.6
Identities = 13/37 (35%), Positives = 22/37 (59%), Gaps = 1/37 (2%)
Frame = +3
Query: 243 PK-QESRPSIAGEGDPEFIKRQDQKRSDLDEQLKEYI 350
PK Q RP I+ + E K D+K++ +E+++E I
Sbjct: 143 PKSQRKRPKISFDSVAELAKESDEKQNAYEEKIEERI 179
>SPAC1834.07 |klp3|krp1|kinesin-like protein
Klp3|Schizosaccharomyces pombe|chr 1|||Manual
Length = 554
Score = 27.1 bits (57), Expect = 3.6
Identities = 14/49 (28%), Positives = 28/49 (57%), Gaps = 1/49 (2%)
Frame = +3
Query: 609 PNFTIQKKSENFGLSNAQLERNKTKEQLEE-EKKISLSIRIKPLTIEGL 752
P FTI++K +NF ++N ERN ++L + ++ + ++ I+ L
Sbjct: 490 PGFTIEQKDKNFSINN---ERNNFLQKLSTLDSSLAALVNVQRKLIKAL 535
>SPBC146.03c |cut3|smc4, smc4|condensin subunit
Cut3|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1324
Score = 26.2 bits (55), Expect = 6.3
Identities = 31/115 (26%), Positives = 57/115 (49%), Gaps = 1/115 (0%)
Frame = +3
Query: 522 IEEKRQRLEEAEKKRQAMLQAMKDASKTGPNFTIQKKS-ENFGLSNAQLERNKTKEQLEE 698
+E+ Q + +K + + + A+K + T +KK+ +++ ++E + K L +
Sbjct: 390 LEKFEQTERDISEKNEEVKSLREKAAKVKNDCTSEKKTRQSYEQQTVKIEE-QLKFLLNK 448
Query: 699 EKKISLSIRIKPLTIEGLSVDKLRQKARNSGSASFXLETEKYDLXREAKETGLRL 863
EKK+ S IE LS +K +A NS S S ++++K L E + LRL
Sbjct: 449 EKKLKKS-------IEALSFEK--SEAENSLS-SHDIDSQK--LNSEIADLSLRL 491
>SPBPB8B6.02c |||urea transporter |Schizosaccharomyces pombe|chr
2|||Manual
Length = 673
Score = 26.2 bits (55), Expect = 6.3
Identities = 14/35 (40%), Positives = 18/35 (51%)
Frame = -1
Query: 168 CWLFIECRTGRSRSLSHSALVLGPAAQRRWNVESA 64
CW I G S L+ AL+L PA+ NV S+
Sbjct: 292 CWWIIPMALGSSAGLACRALLLNPASVTYPNVLSS 326
>SPAC24B11.10c |chr3|cfh1|chitin synthase regulatory factor Chr3
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 932
Score = 25.8 bits (54), Expect = 8.3
Identities = 9/17 (52%), Positives = 12/17 (70%)
Frame = +3
Query: 63 PRTPHSNVAVLPVQEPV 113
PR PHS + +LP + PV
Sbjct: 357 PRYPHSQMVMLPARSPV 373
>SPAC22F3.11c |snu23||U4/U6 x U5 tri-snRNP complex subunit
Snu23|Schizosaccharomyces pombe|chr 1|||Manual
Length = 151
Score = 25.8 bits (54), Expect = 8.3
Identities = 15/69 (21%), Positives = 36/69 (52%)
Frame = +3
Query: 522 IEEKRQRLEEAEKKRQAMLQAMKDASKTGPNFTIQKKSENFGLSNAQLERNKTKEQLEEE 701
I EKR LEE +++ + + + + K ++++++ E + + +LE K + + ++
Sbjct: 65 IIEKRATLEEVKERMEYWRRQLLEPEKGSEEYSLKERVERY---HQELEAKKLRRKQKKV 121
Query: 702 KKISLSIRI 728
K S R+
Sbjct: 122 NKEKNSPRL 130
>SPBC2A9.07c |||zf-PARP-type zinc finger protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 274
Score = 25.8 bits (54), Expect = 8.3
Identities = 16/64 (25%), Positives = 35/64 (54%), Gaps = 2/64 (3%)
Frame = +3
Query: 525 EEKRQRLEEAEKKRQAMLQAMKDASKTGPNFTIQKKSENFGLSNAQLERNKTK--EQLEE 698
EEK +++EE E + + ++D K+ +++K S A+ +R+ + E LE+
Sbjct: 132 EEKDRKIEEGELTSEEEKEPIQDLRKSHKRKSVEKSSVPNKKHKAERKRSPSPKIEILED 191
Query: 699 EKKI 710
+++I
Sbjct: 192 DEEI 195
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,479,728
Number of Sequences: 5004
Number of extensions: 38242
Number of successful extensions: 200
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 178
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 194
length of database: 2,362,478
effective HSP length: 72
effective length of database: 2,002,190
effective search space used: 450492750
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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