Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP26_F_I01
         (934 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

01_03_0117 + 12684729-12685886,12685978-12686145,12686292-126863...    31   1.7  
04_03_0904 + 20717005-20718087                                         30   2.3  
07_03_0177 - 14770777-14772045                                         29   5.3  
02_01_0275 - 1828300-1828344,1828396-1828531,1828623-1829317           29   5.3  
01_01_0070 - 542603-542686,542803-543441                               28   9.2  

>01_03_0117 +
           12684729-12685886,12685978-12686145,12686292-12686336,
           12686438-12687280
          Length = 737

 Score = 30.7 bits (66), Expect = 1.7
 Identities = 19/59 (32%), Positives = 23/59 (38%), Gaps = 1/59 (1%)
 Frame = +2

Query: 668 THAHXXRP-LXPXXPPTSKPTIXXXXPSXNPXQKCXPNXXXXPPTSFRPLHXPWXSPQP 841
           TH H   P L P  PP   P+     P  +   K        PPT+ RP   P   P+P
Sbjct: 186 THHHAKPPSLPPAEPPVPSPS--PEHPPRHSPSKPPAYAPAKPPTALRPAIPPAAMPKP 242


>04_03_0904 + 20717005-20718087
          Length = 360

 Score = 30.3 bits (65), Expect = 2.3
 Identities = 15/52 (28%), Positives = 19/52 (36%)
 Frame = +2

Query: 686 RPLXPXXPPTSKPTIXXXXPSXNPXQKCXPNXXXXPPTSFRPLHXPWXSPQP 841
           +P      PT  P      P  NP     P     PP +++P   P   PQP
Sbjct: 203 KPTPTPYTPTPTPPSYKPQPKPNPPPTYKPQPKPNPPPTYKPA-PPTYKPQP 253



 Score = 28.3 bits (60), Expect = 9.2
 Identities = 14/50 (28%), Positives = 20/50 (40%)
 Frame = +2

Query: 686 RPLXPXXPPTSKPTIXXXXPSXNPXQKCXPNXXXXPPTSFRPLHXPWXSP 835
           +P  P   P  KPT     P+  P     P     PP +++P   P  +P
Sbjct: 120 KPTPPTYKPQPKPTPAPYTPTPTP-PTYKPQPKPTPPPTYKPQPKPTPTP 168


>07_03_0177 - 14770777-14772045
          Length = 422

 Score = 29.1 bits (62), Expect = 5.3
 Identities = 21/62 (33%), Positives = 25/62 (40%)
 Frame = -2

Query: 873 RGGXFGKGXRXGWGEXQGXWSGRKLVGGXXXXLGXHFXXGFXXGXXXXMVGLDVGGXXGX 694
           +GG FGKG   G G  +G   G    GG     G  F  G   G     +G  +GG  G 
Sbjct: 119 KGGGFGKGGGFGGGFGKGGGIG----GGIGHGAGGGFGKG---GGLGGGIGPGIGGGYGK 171

Query: 693 SG 688
            G
Sbjct: 172 GG 173


>02_01_0275 - 1828300-1828344,1828396-1828531,1828623-1829317
          Length = 291

 Score = 29.1 bits (62), Expect = 5.3
 Identities = 15/52 (28%), Positives = 20/52 (38%)
 Frame = +2

Query: 686 RPLXPXXPPTSKPTIXXXXPSXNPXQKCXPNXXXXPPTSFRPLHXPWXSPQP 841
           +P  P  PP  KP      P   P +   P+    PP    P+  P  +P P
Sbjct: 107 KPYRPPPPPRKKPQFQ---PPPQPPRAWDPSPPPPPPAPAAPVLVPPPAPAP 155


>01_01_0070 - 542603-542686,542803-543441
          Length = 240

 Score = 28.3 bits (60), Expect = 9.2
 Identities = 14/51 (27%), Positives = 19/51 (37%)
 Frame = +2

Query: 689 PLXPXXPPTSKPTIXXXXPSXNPXQKCXPNXXXXPPTSFRPLHXPWXSPQP 841
           P+ P   P   P +    P     +K  P     PP +  P+  P  SP P
Sbjct: 64  PVAPAKAPPVAPAVAPVTPPPPTPKKAPPPPVTPPPVTPPPVTPPPVSPPP 114


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,137,227
Number of Sequences: 37544
Number of extensions: 172509
Number of successful extensions: 409
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 337
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 405
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2670960720
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)