Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP26_F_H24
         (918 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

11_03_0183 - 11310671-11313625,11314243-11314287,11314550-11314717     31   1.7  
10_06_0039 - 9966744-9967535,9968241-9968482,9969021-9969223,996...    27   2.6  
04_03_0018 - 9434088-9434141,9434211-9434282,9434968-9435062,943...    29   3.9  
08_01_0375 - 3307206-3307316,3307870-3307965,3308061-3308132,330...    29   6.8  
05_07_0200 - 28368890-28369021,28369169-28369303,28369918-283699...    28   9.0  

>11_03_0183 - 11310671-11313625,11314243-11314287,11314550-11314717
          Length = 1055

 Score = 30.7 bits (66), Expect = 1.7
 Identities = 18/52 (34%), Positives = 21/52 (40%)
 Frame = -1

Query: 669 GDXPGRRXPXAGXGEXAXEEEGTXXXXXXXXPRGGASSXXPWXPPPPPXXPE 514
           G+  GRR P AG GE   +EEG          +   S      P PPP   E
Sbjct: 43  GERGGRRRPAAG-GEGGRDEEGRNGYVVAQLLKSPRSGRPKNQPSPPPQEEE 93


>10_06_0039 -
           9966744-9967535,9968241-9968482,9969021-9969223,
           9969333-9970645
          Length = 849

 Score = 26.6 bits (56), Expect(2) = 2.6
 Identities = 9/13 (69%), Positives = 9/13 (69%)
 Frame = -1

Query: 540 PPPPPXXPEPXXG 502
           PPPPP  PEP  G
Sbjct: 348 PPPPPPPPEPPTG 360



 Score = 21.8 bits (44), Expect(2) = 2.6
 Identities = 8/14 (57%), Positives = 8/14 (57%)
 Frame = -1

Query: 558 SXXPWXPPPPPXXP 517
           S  P  PPPPP  P
Sbjct: 325 SNPPPAPPPPPPPP 338


>04_03_0018 - 9434088-9434141,9434211-9434282,9434968-9435062,
            9435445-9435526,9435610-9435660,9435749-9435829,
            9435965-9436006,9436117-9436215,9438130-9438201,
            9438557-9438680,9438850-9439723,9440274-9440456,
            9440941-9442741,9442825-9443049,9443117-9443814,
            9444519-9444591
          Length = 1541

 Score = 29.5 bits (63), Expect = 3.9
 Identities = 20/59 (33%), Positives = 22/59 (37%), Gaps = 2/59 (3%)
 Frame = -2

Query: 374  PPXPXXGGAXPPPHXDLPRRGGRXXXGXXXXXGVGGVPXXXPXXFFXGXXPXP--XGGI 204
            PP    GG   PP   LP   G          G+GG P   P   F G  P P   GG+
Sbjct: 1125 PPIGGLGGHQAPPAPPLPEGIGGVPP-PPPVGGLGGPPAPPPPAGFRGGTPPPNAHGGV 1182


>08_01_0375 -
           3307206-3307316,3307870-3307965,3308061-3308132,
           3308247-3308315,3308427-3308513,3308753-3308858,
           3309118-3309237,3309327-3309406,3309497-3309878,
           3310746-3310814,3311460-3312202
          Length = 644

 Score = 28.7 bits (61), Expect = 6.8
 Identities = 15/56 (26%), Positives = 16/56 (28%)
 Frame = +3

Query: 663 HPPXXXGVWPPPXGXXGXXKNXXXPXXXXGRXTXPXXGXXPXXXXPPPPXXKNXPP 830
           HPP   G +PP                  G    P     P    PPPP     PP
Sbjct: 10  HPPPPQGGFPPQPPPMNPYGPPPPQQPAYGHMPPPQGAPPPFLAPPPPPPPGPPPP 65


>05_07_0200 -
           28368890-28369021,28369169-28369303,28369918-28369947,
           28370019-28370093,28370222-28370333,28370440-28370621,
           28370723-28370854,28372193-28373479
          Length = 694

 Score = 28.3 bits (60), Expect = 9.0
 Identities = 11/19 (57%), Positives = 11/19 (57%)
 Frame = -1

Query: 567 GASSXXPWXPPPPPXXPEP 511
           G SS  P  PPPPP  P P
Sbjct: 232 GCSSVRPPPPPPPPPLPPP 250


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.317    0.144    0.487 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,501,085
Number of Sequences: 37544
Number of extensions: 315005
Number of successful extensions: 3556
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1708
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3215
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2612387020
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)