Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP26_F_H24
         (918 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z77662-5|CAB01192.2|  579|Caenorhabditis elegans Hypothetical pr...    31   1.5  
AC024847-11|AAO21416.1|  453|Caenorhabditis elegans Ground-like ...    29   3.5  
AC024847-10|AAF60859.1|  393|Caenorhabditis elegans Ground-like ...    29   3.5  
Z79694-1|CAB01959.1|  303|Caenorhabditis elegans Hypothetical pr...    29   4.7  
U39666-1|AAA80412.2|  644|Caenorhabditis elegans Nematode astaci...    29   6.2  
AL132876-23|CAD92403.1|  210|Caenorhabditis elegans Hypothetical...    28   8.1  

>Z77662-5|CAB01192.2|  579|Caenorhabditis elegans Hypothetical
           protein F47B8.5 protein.
          Length = 579

 Score = 30.7 bits (66), Expect = 1.5
 Identities = 18/71 (25%), Positives = 21/71 (29%)
 Frame = +2

Query: 512 GSGXXGGGGGXHGXXEEAPPRXXXXXXXXXVPSSSXAXSPXPAXGXRRPGXSPXXXGGMA 691
           G G  GGGGG       + P           P    A +P P      P          A
Sbjct: 392 GGGYSGGGGGGGEAAPPSSPPADAAPAPPPAPEPVPAPAPAPEAAPVAPSADAGGYAAAA 451

Query: 692 SPXGXXGXPXK 724
           +P G    P K
Sbjct: 452 APAGGGSYPAK 462


>AC024847-11|AAO21416.1|  453|Caenorhabditis elegans Ground-like
           (grd related) protein16, isoform b protein.
          Length = 453

 Score = 29.5 bits (63), Expect = 3.5
 Identities = 11/23 (47%), Positives = 13/23 (56%)
 Frame = -1

Query: 570 GGASSXXPWXPPPPPXXPEPXXG 502
           GG+ +  P  PPPPP  P P  G
Sbjct: 53  GGSYAAAPALPPPPPPPPAPIGG 75


>AC024847-10|AAF60859.1|  393|Caenorhabditis elegans Ground-like
           (grd related) protein16, isoform a protein.
          Length = 393

 Score = 29.5 bits (63), Expect = 3.5
 Identities = 11/23 (47%), Positives = 13/23 (56%)
 Frame = -1

Query: 570 GGASSXXPWXPPPPPXXPEPXXG 502
           GG+ +  P  PPPPP  P P  G
Sbjct: 53  GGSYAAAPALPPPPPPPPAPIGG 75


>Z79694-1|CAB01959.1|  303|Caenorhabditis elegans Hypothetical
           protein C15A11.1 protein.
          Length = 303

 Score = 29.1 bits (62), Expect = 4.7
 Identities = 21/68 (30%), Positives = 24/68 (35%), Gaps = 4/68 (5%)
 Frame = -1

Query: 702 PXGEAIPPXXXGDX--PGRRXPXAGXGEXAXEEEGTXXXXXXXXPRG--GASSXXPWXPP 535
           P G A PP   G    PG        G  +  E G+        P G  G  +  P  PP
Sbjct: 149 PAGPAGPPGPDGQPGAPGPNGQPGAAGTTSTNEPGSPGPAGPPGPAGPAGEDAAAPESPP 208

Query: 534 PPPXXPEP 511
            PP  P P
Sbjct: 209 GPPGPPGP 216


>U39666-1|AAA80412.2|  644|Caenorhabditis elegans Nematode astacin
           protease protein33 protein.
          Length = 644

 Score = 28.7 bits (61), Expect = 6.2
 Identities = 10/18 (55%), Positives = 10/18 (55%)
 Frame = -1

Query: 549 PWXPPPPPXXPEPXXGSD 496
           PW  PPPP  PEP    D
Sbjct: 76  PWGLPPPPPPPEPEPQQD 93


>AL132876-23|CAD92403.1|  210|Caenorhabditis elegans Hypothetical
           protein Y105E8A.28 protein.
          Length = 210

 Score = 28.3 bits (60), Expect = 8.1
 Identities = 9/18 (50%), Positives = 12/18 (66%)
 Frame = -1

Query: 549 PWXPPPPPXXPEPXXGSD 496
           P+ PPPPP  PEP   ++
Sbjct: 119 PFVPPPPPPLPEPAAAAE 136


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.317    0.144    0.487 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,022,072
Number of Sequences: 27780
Number of extensions: 176681
Number of successful extensions: 1128
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 505
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1040
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2349764032
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)