Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP26_F_H20
(870 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BT007379-1|AAP36043.1| 257|Homo sapiens ribosomal protein L8 pr... 318 1e-86
BC013104-1|AAH13104.1| 257|Homo sapiens ribosomal protein L8 pr... 318 1e-86
BC012197-1|AAH12197.1| 257|Homo sapiens ribosomal protein L8 pr... 318 1e-86
Z28407-1|CAA82248.1| 257|Homo sapiens ribosomal protein L8 prot... 318 2e-86
CR457046-1|CAG33327.1| 257|Homo sapiens RPL8 protein. 318 2e-86
BC093064-1|AAH93064.1| 257|Homo sapiens ribosomal protein L8 pr... 318 2e-86
BC000077-1|AAH00077.1| 257|Homo sapiens ribosomal protein L8 pr... 318 2e-86
BC000047-1|AAH00047.2| 211|Homo sapiens RPL8 protein protein. 318 2e-86
AB061821-1|BAB79459.1| 257|Homo sapiens ribosomal protein L8 pr... 318 2e-86
AB007168-1|BAA25829.1| 130|Homo sapiens ribosomal protein L8 pr... 140 5e-33
AF132956-1|AAD27731.1| 353|Homo sapiens CGI-22 protein protein. 40 0.012
BC020212-1|AAH20212.1| 305|Homo sapiens mitochondrial ribosomal... 39 0.020
BC013685-1|AAH13685.1| 305|Homo sapiens mitochondrial ribosomal... 39 0.020
AL355385-2|CAI13780.1| 302|Homo sapiens protein ( Human DNA seq... 39 0.020
AY339211-1|AAQ02646.1| 532|Homo sapiens nonintegrin platelet re... 31 7.2
L40764-1|AAC41756.1| 438|Homo sapiens vasoactive intestinal pol... 30 9.5
L36566-1|AAC37569.1| 438|Homo sapiens protein ( Human helodermi... 30 9.5
AK124779-1|BAC85944.1| 163|Homo sapiens protein ( Homo sapiens ... 30 9.5
>BT007379-1|AAP36043.1| 257|Homo sapiens ribosomal protein L8
protein.
Length = 257
Score = 318 bits (782), Expect = 1e-86
Identities = 150/194 (77%), Positives = 166/194 (85%)
Frame = +2
Query: 266 RGAPLAVVHFRDPYKFKTRKELFIAPEGLYTGQFVYCGKKATLEVGNVMPVGAMPEGTIV 445
RGAPLA V FRDPY+FK R ELFIA EG++TGQFVYCGKKA L VGNV+PVG MPEGTIV
Sbjct: 54 RGAPLAKVVFRDPYRFKKRTELFIAAEGIHTGQFVYCGKKAQLNVGNVLPVGTMPEGTIV 113
Query: 446 CNLEEKMGDRGRLARASGNFATVIGHNPDAKRTRVKLPSGAKKVLPSSNRGMVGIVAGGG 625
C LEEK GDRG+LARASGN+ATVI HNP+ K+TRVKLPSG+KKV+ S+NR +VG+VAGGG
Sbjct: 114 CCLEEKPGDRGKLARASGNYATVISHNPETKKTRVKLPSGSKKVISSANRAVVGVVAGGG 173
Query: 626 RIDKPILKAGRAYHKYKVKRNCWPYVRGVAMNPW*SILTVGGNHQHIGKASTVKRXTSAG 805
RIDKPILKAGRAYHKYK KRNCWP VRGVAMNP GGNHQHIGK ST++R AG
Sbjct: 174 RIDKPILKAGRAYHKYKAKRNCWPRVRGVAMNPVEHPFG-GGNHQHIGKPSTIRRDAPAG 232
Query: 806 RKVGLIAAPRTGRI 847
RKVGLIAA RTGR+
Sbjct: 233 RKVGLIAARRTGRL 246
Score = 50.8 bits (116), Expect = 6e-06
Identities = 23/32 (71%), Positives = 27/32 (84%)
Frame = +3
Query: 105 MGRVIRAQRKGAGSVFVSHTKKRKGAPKLRSL 200
MGRVIR QRKGAGSVF +H K RKGA +LR++
Sbjct: 1 MGRVIRGQRKGAGSVFRAHVKHRKGAARLRAV 32
Score = 47.6 bits (108), Expect = 6e-05
Identities = 22/33 (66%), Positives = 25/33 (75%)
Frame = +1
Query: 166 RRGKALLNFAL*XYAERHGYIKGVVKDIIHDPG 264
R+G A L +AERHGYIKG+VKDIIHDPG
Sbjct: 23 RKGAARLRAV--DFAERHGYIKGIVKDIIHDPG 53
>BC013104-1|AAH13104.1| 257|Homo sapiens ribosomal protein L8
protein.
Length = 257
Score = 318 bits (782), Expect = 1e-86
Identities = 150/194 (77%), Positives = 166/194 (85%)
Frame = +2
Query: 266 RGAPLAVVHFRDPYKFKTRKELFIAPEGLYTGQFVYCGKKATLEVGNVMPVGAMPEGTIV 445
RGAPLA V FRDPY+FK R ELFIA EG++TGQFVYCGKKA L VGNV+PVG MPEGTIV
Sbjct: 54 RGAPLAKVVFRDPYRFKKRTELFIAAEGIHTGQFVYCGKKAQLNVGNVLPVGTMPEGTIV 113
Query: 446 CNLEEKMGDRGRLARASGNFATVIGHNPDAKRTRVKLPSGAKKVLPSSNRGMVGIVAGGG 625
C LEEK GDRG+LARASGN+ATVI HNP+ K+TRVKLPSG+KKV+ S+NR +VG+VAGGG
Sbjct: 114 CCLEEKPGDRGKLARASGNYATVISHNPETKKTRVKLPSGSKKVISSANRAVVGVVAGGG 173
Query: 626 RIDKPILKAGRAYHKYKVKRNCWPYVRGVAMNPW*SILTVGGNHQHIGKASTVKRXTSAG 805
RIDKPILKAGRAYHKYK KRNCWP VRGVAMNP GGNHQHIGK ST++R AG
Sbjct: 174 RIDKPILKAGRAYHKYKAKRNCWPRVRGVAMNPVEHPFG-GGNHQHIGKPSTIRRDAPAG 232
Query: 806 RKVGLIAAPRTGRI 847
RKVGLIAA RTGR+
Sbjct: 233 RKVGLIAARRTGRL 246
Score = 50.8 bits (116), Expect = 6e-06
Identities = 23/32 (71%), Positives = 27/32 (84%)
Frame = +3
Query: 105 MGRVIRAQRKGAGSVFVSHTKKRKGAPKLRSL 200
MGRVIR QRKGAGSVF +H K RKGA +LR++
Sbjct: 1 MGRVIRGQRKGAGSVFRAHVKHRKGAARLRAV 32
Score = 47.6 bits (108), Expect = 6e-05
Identities = 22/33 (66%), Positives = 25/33 (75%)
Frame = +1
Query: 166 RRGKALLNFAL*XYAERHGYIKGVVKDIIHDPG 264
R+G A L +AERHGYIKG+VKDIIHDPG
Sbjct: 23 RKGAARLRAV--DFAERHGYIKGIVKDIIHDPG 53
>BC012197-1|AAH12197.1| 257|Homo sapiens ribosomal protein L8
protein.
Length = 257
Score = 318 bits (782), Expect = 1e-86
Identities = 150/194 (77%), Positives = 166/194 (85%)
Frame = +2
Query: 266 RGAPLAVVHFRDPYKFKTRKELFIAPEGLYTGQFVYCGKKATLEVGNVMPVGAMPEGTIV 445
RGAPLA V FRDPY+FK R ELFIA EG++TGQFVYCGKKA L VGNV+PVG MPEGTIV
Sbjct: 54 RGAPLAKVVFRDPYRFKKRTELFIAAEGIHTGQFVYCGKKAQLNVGNVLPVGTMPEGTIV 113
Query: 446 CNLEEKMGDRGRLARASGNFATVIGHNPDAKRTRVKLPSGAKKVLPSSNRGMVGIVAGGG 625
C LEEK GDRG+LARASGN+ATVI HNP+ K+TRVKLPSG+KKV+ S+NR +VG+VAGGG
Sbjct: 114 CCLEEKPGDRGKLARASGNYATVISHNPETKKTRVKLPSGSKKVISSANRAVVGVVAGGG 173
Query: 626 RIDKPILKAGRAYHKYKVKRNCWPYVRGVAMNPW*SILTVGGNHQHIGKASTVKRXTSAG 805
RIDKPILKAGRAYHKYK KRNCWP VRGVAMNP GGNHQHIGK ST++R AG
Sbjct: 174 RIDKPILKAGRAYHKYKAKRNCWPRVRGVAMNPVEHPFG-GGNHQHIGKPSTIRRDAPAG 232
Query: 806 RKVGLIAAPRTGRI 847
RKVGLIAA RTGR+
Sbjct: 233 RKVGLIAARRTGRL 246
Score = 50.8 bits (116), Expect = 6e-06
Identities = 23/32 (71%), Positives = 27/32 (84%)
Frame = +3
Query: 105 MGRVIRAQRKGAGSVFVSHTKKRKGAPKLRSL 200
MGRVIR QRKGAGSVF +H K RKGA +LR++
Sbjct: 1 MGRVIRGQRKGAGSVFRAHVKHRKGAARLRAV 32
Score = 47.6 bits (108), Expect = 6e-05
Identities = 22/33 (66%), Positives = 25/33 (75%)
Frame = +1
Query: 166 RRGKALLNFAL*XYAERHGYIKGVVKDIIHDPG 264
R+G A L +AERHGYIKG+VKDIIHDPG
Sbjct: 23 RKGAARLRAV--DFAERHGYIKGIVKDIIHDPG 53
>Z28407-1|CAA82248.1| 257|Homo sapiens ribosomal protein L8
protein.
Length = 257
Score = 318 bits (781), Expect = 2e-86
Identities = 149/194 (76%), Positives = 166/194 (85%)
Frame = +2
Query: 266 RGAPLAVVHFRDPYKFKTRKELFIAPEGLYTGQFVYCGKKATLEVGNVMPVGAMPEGTIV 445
RGAPLA V FRDPY+FK R ELFIA EG++TGQFVYCGKKA L +GNV+PVG MPEGTIV
Sbjct: 54 RGAPLAKVVFRDPYRFKKRTELFIAAEGIHTGQFVYCGKKAQLNIGNVLPVGTMPEGTIV 113
Query: 446 CNLEEKMGDRGRLARASGNFATVIGHNPDAKRTRVKLPSGAKKVLPSSNRGMVGIVAGGG 625
C LEEK GDRG+LARASGN+ATVI HNP+ K+TRVKLPSG+KKV+ S+NR +VG+VAGGG
Sbjct: 114 CCLEEKPGDRGKLARASGNYATVISHNPETKKTRVKLPSGSKKVISSANRAVVGVVAGGG 173
Query: 626 RIDKPILKAGRAYHKYKVKRNCWPYVRGVAMNPW*SILTVGGNHQHIGKASTVKRXTSAG 805
RIDKPILKAGRAYHKYK KRNCWP VRGVAMNP GGNHQHIGK ST++R AG
Sbjct: 174 RIDKPILKAGRAYHKYKAKRNCWPRVRGVAMNPVEHPFG-GGNHQHIGKPSTIRRDAPAG 232
Query: 806 RKVGLIAAPRTGRI 847
RKVGLIAA RTGR+
Sbjct: 233 RKVGLIAARRTGRL 246
Score = 50.8 bits (116), Expect = 6e-06
Identities = 23/32 (71%), Positives = 27/32 (84%)
Frame = +3
Query: 105 MGRVIRAQRKGAGSVFVSHTKKRKGAPKLRSL 200
MGRVIR QRKGAGSVF +H K RKGA +LR++
Sbjct: 1 MGRVIRGQRKGAGSVFRAHVKHRKGAARLRAV 32
Score = 47.6 bits (108), Expect = 6e-05
Identities = 22/33 (66%), Positives = 25/33 (75%)
Frame = +1
Query: 166 RRGKALLNFAL*XYAERHGYIKGVVKDIIHDPG 264
R+G A L +AERHGYIKG+VKDIIHDPG
Sbjct: 23 RKGAARLRAV--DFAERHGYIKGIVKDIIHDPG 53
>CR457046-1|CAG33327.1| 257|Homo sapiens RPL8 protein.
Length = 257
Score = 318 bits (781), Expect = 2e-86
Identities = 149/194 (76%), Positives = 166/194 (85%)
Frame = +2
Query: 266 RGAPLAVVHFRDPYKFKTRKELFIAPEGLYTGQFVYCGKKATLEVGNVMPVGAMPEGTIV 445
RGAPLA V FRDPY+FK R ELFIA EG++TGQFVYCGKKA L +GNV+PVG MPEGTIV
Sbjct: 54 RGAPLAKVVFRDPYRFKKRTELFIAAEGIHTGQFVYCGKKAQLNIGNVLPVGTMPEGTIV 113
Query: 446 CNLEEKMGDRGRLARASGNFATVIGHNPDAKRTRVKLPSGAKKVLPSSNRGMVGIVAGGG 625
C LEEK GDRG+LARASGN+ATVI HNP+ K+TRVKLPSG+KKV+ S+NR +VG+VAGGG
Sbjct: 114 CCLEEKPGDRGKLARASGNYATVISHNPETKKTRVKLPSGSKKVISSANRAVVGVVAGGG 173
Query: 626 RIDKPILKAGRAYHKYKVKRNCWPYVRGVAMNPW*SILTVGGNHQHIGKASTVKRXTSAG 805
RIDKPILKAGRAYHKYK KRNCWP VRGVAMNP GGNHQHIGK ST++R AG
Sbjct: 174 RIDKPILKAGRAYHKYKAKRNCWPRVRGVAMNPVEHPFG-GGNHQHIGKPSTIRRDAPAG 232
Query: 806 RKVGLIAAPRTGRI 847
RKVGLIAA RTGR+
Sbjct: 233 RKVGLIAARRTGRL 246
Score = 50.8 bits (116), Expect = 6e-06
Identities = 23/32 (71%), Positives = 27/32 (84%)
Frame = +3
Query: 105 MGRVIRAQRKGAGSVFVSHTKKRKGAPKLRSL 200
MGRVIR QRKGAGSVF +H K RKGA +LR++
Sbjct: 1 MGRVIRGQRKGAGSVFRAHVKHRKGAARLRAV 32
Score = 47.6 bits (108), Expect = 6e-05
Identities = 22/33 (66%), Positives = 25/33 (75%)
Frame = +1
Query: 166 RRGKALLNFAL*XYAERHGYIKGVVKDIIHDPG 264
R+G A L +AERHGYIKG+VKDIIHDPG
Sbjct: 23 RKGAARLRAV--DFAERHGYIKGIVKDIIHDPG 53
>BC093064-1|AAH93064.1| 257|Homo sapiens ribosomal protein L8
protein.
Length = 257
Score = 318 bits (781), Expect = 2e-86
Identities = 149/194 (76%), Positives = 166/194 (85%)
Frame = +2
Query: 266 RGAPLAVVHFRDPYKFKTRKELFIAPEGLYTGQFVYCGKKATLEVGNVMPVGAMPEGTIV 445
RGAPLA V FRDPY+FK R ELFIA EG++TGQFVYCGKKA L +GNV+PVG MPEGTIV
Sbjct: 54 RGAPLAKVVFRDPYRFKKRTELFIAAEGIHTGQFVYCGKKAQLNIGNVLPVGTMPEGTIV 113
Query: 446 CNLEEKMGDRGRLARASGNFATVIGHNPDAKRTRVKLPSGAKKVLPSSNRGMVGIVAGGG 625
C LEEK GDRG+LARASGN+ATVI HNP+ K+TRVKLPSG+KKV+ S+NR +VG+VAGGG
Sbjct: 114 CCLEEKPGDRGKLARASGNYATVISHNPETKKTRVKLPSGSKKVISSANRAVVGVVAGGG 173
Query: 626 RIDKPILKAGRAYHKYKVKRNCWPYVRGVAMNPW*SILTVGGNHQHIGKASTVKRXTSAG 805
RIDKPILKAGRAYHKYK KRNCWP VRGVAMNP GGNHQHIGK ST++R AG
Sbjct: 174 RIDKPILKAGRAYHKYKAKRNCWPRVRGVAMNPVEHPFG-GGNHQHIGKPSTIRRDAPAG 232
Query: 806 RKVGLIAAPRTGRI 847
RKVGLIAA RTGR+
Sbjct: 233 RKVGLIAARRTGRL 246
Score = 50.8 bits (116), Expect = 6e-06
Identities = 23/32 (71%), Positives = 27/32 (84%)
Frame = +3
Query: 105 MGRVIRAQRKGAGSVFVSHTKKRKGAPKLRSL 200
MGRVIR QRKGAGSVF +H K RKGA +LR++
Sbjct: 1 MGRVIRGQRKGAGSVFRAHVKHRKGAARLRAV 32
Score = 47.6 bits (108), Expect = 6e-05
Identities = 22/33 (66%), Positives = 25/33 (75%)
Frame = +1
Query: 166 RRGKALLNFAL*XYAERHGYIKGVVKDIIHDPG 264
R+G A L +AERHGYIKG+VKDIIHDPG
Sbjct: 23 RKGAARLRAV--DFAERHGYIKGIVKDIIHDPG 53
>BC000077-1|AAH00077.1| 257|Homo sapiens ribosomal protein L8
protein.
Length = 257
Score = 318 bits (781), Expect = 2e-86
Identities = 149/194 (76%), Positives = 166/194 (85%)
Frame = +2
Query: 266 RGAPLAVVHFRDPYKFKTRKELFIAPEGLYTGQFVYCGKKATLEVGNVMPVGAMPEGTIV 445
RGAPLA V FRDPY+FK R ELFIA EG++TGQFVYCGKKA L +GNV+PVG MPEGTIV
Sbjct: 54 RGAPLAKVVFRDPYRFKKRTELFIAAEGIHTGQFVYCGKKAQLNIGNVLPVGTMPEGTIV 113
Query: 446 CNLEEKMGDRGRLARASGNFATVIGHNPDAKRTRVKLPSGAKKVLPSSNRGMVGIVAGGG 625
C LEEK GDRG+LARASGN+ATVI HNP+ K+TRVKLPSG+KKV+ S+NR +VG+VAGGG
Sbjct: 114 CCLEEKPGDRGKLARASGNYATVISHNPETKKTRVKLPSGSKKVISSANRAVVGVVAGGG 173
Query: 626 RIDKPILKAGRAYHKYKVKRNCWPYVRGVAMNPW*SILTVGGNHQHIGKASTVKRXTSAG 805
RIDKPILKAGRAYHKYK KRNCWP VRGVAMNP GGNHQHIGK ST++R AG
Sbjct: 174 RIDKPILKAGRAYHKYKAKRNCWPRVRGVAMNPVEHPFG-GGNHQHIGKPSTIRRDAPAG 232
Query: 806 RKVGLIAAPRTGRI 847
RKVGLIAA RTGR+
Sbjct: 233 RKVGLIAARRTGRL 246
Score = 50.8 bits (116), Expect = 6e-06
Identities = 23/32 (71%), Positives = 27/32 (84%)
Frame = +3
Query: 105 MGRVIRAQRKGAGSVFVSHTKKRKGAPKLRSL 200
MGRVIR QRKGAGSVF +H K RKGA +LR++
Sbjct: 1 MGRVIRGQRKGAGSVFRAHVKHRKGAARLRAV 32
Score = 47.6 bits (108), Expect = 6e-05
Identities = 22/33 (66%), Positives = 25/33 (75%)
Frame = +1
Query: 166 RRGKALLNFAL*XYAERHGYIKGVVKDIIHDPG 264
R+G A L +AERHGYIKG+VKDIIHDPG
Sbjct: 23 RKGAARLRAV--DFAERHGYIKGIVKDIIHDPG 53
>BC000047-1|AAH00047.2| 211|Homo sapiens RPL8 protein protein.
Length = 211
Score = 318 bits (781), Expect = 2e-86
Identities = 149/194 (76%), Positives = 166/194 (85%)
Frame = +2
Query: 266 RGAPLAVVHFRDPYKFKTRKELFIAPEGLYTGQFVYCGKKATLEVGNVMPVGAMPEGTIV 445
RGAPLA V FRDPY+FK R ELFIA EG++TGQFVYCGKKA L +GNV+PVG MPEGTIV
Sbjct: 8 RGAPLAKVVFRDPYRFKKRTELFIAAEGIHTGQFVYCGKKAQLNIGNVLPVGTMPEGTIV 67
Query: 446 CNLEEKMGDRGRLARASGNFATVIGHNPDAKRTRVKLPSGAKKVLPSSNRGMVGIVAGGG 625
C LEEK GDRG+LARASGN+ATVI HNP+ K+TRVKLPSG+KKV+ S+NR +VG+VAGGG
Sbjct: 68 CCLEEKPGDRGKLARASGNYATVISHNPETKKTRVKLPSGSKKVISSANRAVVGVVAGGG 127
Query: 626 RIDKPILKAGRAYHKYKVKRNCWPYVRGVAMNPW*SILTVGGNHQHIGKASTVKRXTSAG 805
RIDKPILKAGRAYHKYK KRNCWP VRGVAMNP GGNHQHIGK ST++R AG
Sbjct: 128 RIDKPILKAGRAYHKYKAKRNCWPRVRGVAMNPVEHPFG-GGNHQHIGKPSTIRRDAPAG 186
Query: 806 RKVGLIAAPRTGRI 847
RKVGLIAA RTGR+
Sbjct: 187 RKVGLIAARRTGRL 200
>AB061821-1|BAB79459.1| 257|Homo sapiens ribosomal protein L8
protein.
Length = 257
Score = 318 bits (781), Expect = 2e-86
Identities = 149/194 (76%), Positives = 166/194 (85%)
Frame = +2
Query: 266 RGAPLAVVHFRDPYKFKTRKELFIAPEGLYTGQFVYCGKKATLEVGNVMPVGAMPEGTIV 445
RGAPLA V FRDPY+FK R ELFIA EG++TGQFVYCGKKA L +GNV+PVG MPEGTIV
Sbjct: 54 RGAPLAKVVFRDPYRFKKRTELFIAAEGIHTGQFVYCGKKAQLNIGNVLPVGTMPEGTIV 113
Query: 446 CNLEEKMGDRGRLARASGNFATVIGHNPDAKRTRVKLPSGAKKVLPSSNRGMVGIVAGGG 625
C LEEK GDRG+LARASGN+ATVI HNP+ K+TRVKLPSG+KKV+ S+NR +VG+VAGGG
Sbjct: 114 CCLEEKPGDRGKLARASGNYATVISHNPETKKTRVKLPSGSKKVISSANRAVVGVVAGGG 173
Query: 626 RIDKPILKAGRAYHKYKVKRNCWPYVRGVAMNPW*SILTVGGNHQHIGKASTVKRXTSAG 805
RIDKPILKAGRAYHKYK KRNCWP VRGVAMNP GGNHQHIGK ST++R AG
Sbjct: 174 RIDKPILKAGRAYHKYKAKRNCWPRVRGVAMNPVEHPFG-GGNHQHIGKPSTIRRDAPAG 232
Query: 806 RKVGLIAAPRTGRI 847
RKVGLIAA RTGR+
Sbjct: 233 RKVGLIAARRTGRL 246
Score = 50.8 bits (116), Expect = 6e-06
Identities = 23/32 (71%), Positives = 27/32 (84%)
Frame = +3
Query: 105 MGRVIRAQRKGAGSVFVSHTKKRKGAPKLRSL 200
MGRVIR QRKGAGSVF +H K RKGA +LR++
Sbjct: 1 MGRVIRGQRKGAGSVFRAHVKHRKGAARLRAV 32
Score = 47.6 bits (108), Expect = 6e-05
Identities = 22/33 (66%), Positives = 25/33 (75%)
Frame = +1
Query: 166 RRGKALLNFAL*XYAERHGYIKGVVKDIIHDPG 264
R+G A L +AERHGYIKG+VKDIIHDPG
Sbjct: 23 RKGAARLRAV--DFAERHGYIKGIVKDIIHDPG 53
>AB007168-1|BAA25829.1| 130|Homo sapiens ribosomal protein L8
protein.
Length = 130
Score = 140 bits (340), Expect = 5e-33
Identities = 64/81 (79%), Positives = 71/81 (87%)
Frame = +2
Query: 266 RGAPLAVVHFRDPYKFKTRKELFIAPEGLYTGQFVYCGKKATLEVGNVMPVGAMPEGTIV 445
RGAPLA V FRDPY+FK R ELFIA EG++TGQFVYCGKKA L +GNV+PVG MPEGTIV
Sbjct: 50 RGAPLAKVVFRDPYRFKKRTELFIAAEGIHTGQFVYCGKKAQLNIGNVLPVGTMPEGTIV 109
Query: 446 CNLEEKMGDRGRLARASGNFA 508
C LEEK GDRG+LARASGN+A
Sbjct: 110 CCLEEKPGDRGKLARASGNYA 130
Score = 47.6 bits (108), Expect = 6e-05
Identities = 22/33 (66%), Positives = 25/33 (75%)
Frame = +1
Query: 166 RRGKALLNFAL*XYAERHGYIKGVVKDIIHDPG 264
R+G A L +AERHGYIKG+VKDIIHDPG
Sbjct: 19 RKGAARLRAV--DFAERHGYIKGIVKDIIHDPG 49
Score = 42.7 bits (96), Expect = 0.002
Identities = 19/28 (67%), Positives = 23/28 (82%)
Frame = +3
Query: 117 IRAQRKGAGSVFVSHTKKRKGAPKLRSL 200
IR QRKGAGSVF +H K RKGA +LR++
Sbjct: 1 IRGQRKGAGSVFRAHVKHRKGAARLRAV 28
>AF132956-1|AAD27731.1| 353|Homo sapiens CGI-22 protein protein.
Length = 353
Score = 39.9 bits (89), Expect = 0.012
Identities = 32/119 (26%), Positives = 56/119 (47%), Gaps = 5/119 (4%)
Frame = +2
Query: 317 TRKELFIAPEGLYTGQFV----YCGKKATL-EVGNVMPVGAMPEGTIVCNLEEKMGDRGR 481
+RK IA E + G + + G+ A G+ P+GA+P GT++ N+E + G +
Sbjct: 146 SRKRWIIATENMQAGDTILNSNHIGRMAVAAREGDAHPLGALPVGTLINNVESEPGRGAQ 205
Query: 482 LARASGNFATVIGHNPDAKRTRVKLPSGAKKVLPSSNRGMVGIVAGGGRIDKPILKAGR 658
RA+G ++ + ++LPS + + + VG V+ + I KAGR
Sbjct: 206 YIRAAGTCGVLL--RKVNGHSIIQLPSKRQMQVLETCVATVGRVSNVDHNKRVIGKAGR 262
>BC020212-1|AAH20212.1| 305|Homo sapiens mitochondrial ribosomal
protein L2 protein.
Length = 305
Score = 39.1 bits (87), Expect = 0.020
Identities = 32/119 (26%), Positives = 55/119 (46%), Gaps = 5/119 (4%)
Frame = +2
Query: 317 TRKELFIAPEGLYTGQFV----YCGKKATL-EVGNVMPVGAMPEGTIVCNLEEKMGDRGR 481
+RK IA E + G + + G+ A G+ P+GA+P GT++ N+E + G +
Sbjct: 146 SRKRWIIATENMQAGDTILNSNHIGRMAVAAREGDAHPLGALPVGTLINNVESEPGRGAQ 205
Query: 482 LARASGNFATVIGHNPDAKRTRVKLPSGAKKVLPSSNRGMVGIVAGGGRIDKPILKAGR 658
RA+G ++ ++LPS + + + VG V+ + I KAGR
Sbjct: 206 YIRAAGTCGVLL--RKVNGTAIIQLPSKRQMQVLETCVATVGRVSNVDHNKRVIGKAGR 262
>BC013685-1|AAH13685.1| 305|Homo sapiens mitochondrial ribosomal
protein L2 protein.
Length = 305
Score = 39.1 bits (87), Expect = 0.020
Identities = 32/119 (26%), Positives = 55/119 (46%), Gaps = 5/119 (4%)
Frame = +2
Query: 317 TRKELFIAPEGLYTGQFV----YCGKKATL-EVGNVMPVGAMPEGTIVCNLEEKMGDRGR 481
+RK IA E + G + + G+ A G+ P+GA+P GT++ N+E + G +
Sbjct: 146 SRKRWIIATENMQAGDTILNSNHIGRMAVAAREGDAHPLGALPVGTLINNVESEPGRGAQ 205
Query: 482 LARASGNFATVIGHNPDAKRTRVKLPSGAKKVLPSSNRGMVGIVAGGGRIDKPILKAGR 658
RA+G ++ ++LPS + + + VG V+ + I KAGR
Sbjct: 206 YIRAAGTCGVLL--RKVNGTAIIQLPSKRQMQVLETCVATVGRVSNVDHNKRVIGKAGR 262
>AL355385-2|CAI13780.1| 302|Homo sapiens protein ( Human DNA
sequence from clone RP11-387M24 on chromosome 6 Contains
the 5' end of a gene for a novel protein (KIAA0076
KIAA0708), the ).
Length = 302
Score = 39.1 bits (87), Expect = 0.020
Identities = 32/119 (26%), Positives = 55/119 (46%), Gaps = 5/119 (4%)
Frame = +2
Query: 317 TRKELFIAPEGLYTGQFV----YCGKKATL-EVGNVMPVGAMPEGTIVCNLEEKMGDRGR 481
+RK IA E + G + + G+ A G+ P+GA+P GT++ N+E + G +
Sbjct: 143 SRKRWIIATENMQAGDTILNSNHIGRMAVAAREGDAHPLGALPVGTLINNVESEPGRGAQ 202
Query: 482 LARASGNFATVIGHNPDAKRTRVKLPSGAKKVLPSSNRGMVGIVAGGGRIDKPILKAGR 658
RA+G ++ ++LPS + + + VG V+ + I KAGR
Sbjct: 203 YIRAAGTCGVLL--RKVNGTAIIQLPSKRQMQVLETCVATVGRVSNVDHNKRVIGKAGR 259
>AY339211-1|AAQ02646.1| 532|Homo sapiens nonintegrin platelet
receptor for type I collagen protein.
Length = 532
Score = 30.7 bits (66), Expect = 7.2
Identities = 19/68 (27%), Positives = 30/68 (44%)
Frame = +2
Query: 662 YHKYKVKRNCWPYVRGVAMNPW*SILTVGGNHQHIGKASTVKRXTSAGRKVGLIAAPRTG 841
YH +NC P+ +A P + L + G++ H+ ST+ KVG + R+
Sbjct: 101 YHHLHCYQNCKPHALFLAKTPIATRLRLAGHNAHMYNPSTLWE-----AKVGELLQARSS 155
Query: 842 RIPWXQKP 865
R W P
Sbjct: 156 RPAWQHSP 163
>L40764-1|AAC41756.1| 438|Homo sapiens vasoactive intestinal
polypeptide receptor 2 protein.
Length = 438
Score = 30.3 bits (65), Expect = 9.5
Identities = 18/54 (33%), Positives = 22/54 (40%)
Frame = -3
Query: 769 TYMLMVTTHREDALPGVHGNTTYIWPAVTFDLVLVVCPSSFQNRFVNTSTSSNN 608
T +L T + A GV N T PA + V V CP F N + S N
Sbjct: 39 TELLRSQTEKHKACSGVWDNITCWRPANVGETVTVPCPKVFSNFYSKAGNISKN 92
>L36566-1|AAC37569.1| 438|Homo sapiens protein ( Human
helodermin-preferring VIP receptor (VIP2/PACAP receptor)
mRNA, complete cds. ).
Length = 438
Score = 30.3 bits (65), Expect = 9.5
Identities = 18/54 (33%), Positives = 22/54 (40%)
Frame = -3
Query: 769 TYMLMVTTHREDALPGVHGNTTYIWPAVTFDLVLVVCPSSFQNRFVNTSTSSNN 608
T +L T + A GV N T PA + V V CP F N + S N
Sbjct: 39 TELLRSQTEKHKACSGVWDNITCWRPANVGETVTVPCPKVFSNFYSKAGNISKN 92
>AK124779-1|BAC85944.1| 163|Homo sapiens protein ( Homo sapiens
cDNA FLJ42789 fis, clone BRAWH3007221. ).
Length = 163
Score = 30.3 bits (65), Expect = 9.5
Identities = 13/33 (39%), Positives = 22/33 (66%), Gaps = 1/33 (3%)
Frame = -1
Query: 687 LRLTLYLWYAL-PAFKIGLSIRPPPATIPTMPL 592
L LT +L+ A P F++ +S+ PPP ++P P+
Sbjct: 87 LFLTHFLYLAASPCFRLSVSLFPPPLSLPRSPI 119
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 139,087,912
Number of Sequences: 237096
Number of extensions: 3231084
Number of successful extensions: 6590
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 6227
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6579
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 11048563978
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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