Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP26_F_H09
         (1102 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

06_03_0214 + 18067945-18068463,18068940-18069839,18069918-18070652     25   1.5  
10_01_0100 + 1209424-1209538,1210373-1211073,1211158-1211379,121...    23   1.8  
12_01_0362 - 2746626-2747726,2748358-2748982,2749086-2749156           25   2.6  
12_02_1174 - 26696869-26698191                                         26   2.7  
05_07_0280 - 28920864-28920971,28921076-28921175,28921267-289213...    25   7.4  
07_01_0080 + 587674-588510                                             29   8.7  
01_05_0501 + 22764978-22765896,22766087-22766349,22766613-227668...    25   9.3  

>06_03_0214 + 18067945-18068463,18068940-18069839,18069918-18070652
          Length = 717

 Score = 25.4 bits (53), Expect(2) = 1.5
 Identities = 8/11 (72%), Positives = 8/11 (72%)
 Frame = -3

Query: 554 PXPXPQPPPPP 522
           P P P PPPPP
Sbjct: 201 PLPPPPPPPPP 211



 Score = 24.2 bits (50), Expect(2) = 1.5
 Identities = 8/15 (53%), Positives = 9/15 (60%)
 Frame = -3

Query: 548 PXPQPPPPPXXXXVL 504
           P P PPPPP    +L
Sbjct: 204 PPPPPPPPPDTNSIL 218


>10_01_0100 +
           1209424-1209538,1210373-1211073,1211158-1211379,
           1211452-1211878,1212091-1213219,1213623-1213746,
           1214207-1214278,1215480-1215578,1215617-1215640,
           1215704-1215745,1215815-1215895,1215983-1216114,
           1216115-1216196,1216271-1216365,1218499-1218570,
           1218676-1218792,1219379-1219447,1219521-1219587,
           1219886-1220025
          Length = 1269

 Score = 23.0 bits (47), Expect(3) = 1.8
 Identities = 7/9 (77%), Positives = 7/9 (77%)
 Frame = -3

Query: 548 PXPQPPPPP 522
           P P PPPPP
Sbjct: 712 PPPPPPPPP 720



 Score = 22.6 bits (46), Expect(3) = 1.8
 Identities = 7/10 (70%), Positives = 7/10 (70%)
 Frame = -3

Query: 554 PXPXPQPPPP 525
           P P P PPPP
Sbjct: 663 PAPPPPPPPP 672



 Score = 21.8 bits (44), Expect(3) = 1.8
 Identities = 8/15 (53%), Positives = 8/15 (53%)
 Frame = -3

Query: 401 PXPPVPXPXXRXNRP 357
           P PP P P  R N P
Sbjct: 713 PPPPPPPPANRSNGP 727


>12_01_0362 - 2746626-2747726,2748358-2748982,2749086-2749156
          Length = 598

 Score = 25.0 bits (52), Expect(2) = 2.6
 Identities = 8/10 (80%), Positives = 8/10 (80%)
 Frame = -3

Query: 554 PXPXPQPPPP 525
           P P PQPPPP
Sbjct: 260 PHPRPQPPPP 269



 Score = 23.8 bits (49), Expect(2) = 2.6
 Identities = 7/9 (77%), Positives = 8/9 (88%)
 Frame = -3

Query: 548 PXPQPPPPP 522
           P P+PPPPP
Sbjct: 285 PHPRPPPPP 293


>12_02_1174 - 26696869-26698191
          Length = 440

 Score = 26.2 bits (55), Expect(2) = 2.7
 Identities = 10/18 (55%), Positives = 10/18 (55%)
 Frame = -3

Query: 548 PXPQPPPPPXXXXVLFXR 495
           P PQPPPPP    V   R
Sbjct: 242 PKPQPPPPPPRAPVKMPR 259



 Score = 22.6 bits (46), Expect(2) = 2.7
 Identities = 7/10 (70%), Positives = 7/10 (70%)
 Frame = -3

Query: 554 PXPXPQPPPP 525
           P P P PPPP
Sbjct: 217 PPPSPPPPPP 226


>05_07_0280 -
           28920864-28920971,28921076-28921175,28921267-28921394,
           28922013-28922180,28922280-28922395,28922584-28922736,
           28922904-28923047,28923401-28924133
          Length = 549

 Score = 25.0 bits (52), Expect(2) = 7.4
 Identities = 8/10 (80%), Positives = 8/10 (80%)
 Frame = -3

Query: 554 PXPXPQPPPP 525
           P P PQPPPP
Sbjct: 38  PKPKPQPPPP 47



 Score = 22.2 bits (45), Expect(2) = 7.4
 Identities = 7/9 (77%), Positives = 7/9 (77%)
 Frame = -3

Query: 548 PXPQPPPPP 522
           P  QPPPPP
Sbjct: 50  PRSQPPPPP 58


>07_01_0080 + 587674-588510
          Length = 278

 Score = 28.7 bits (61), Expect = 8.7
 Identities = 11/20 (55%), Positives = 11/20 (55%)
 Frame = -3

Query: 554 PXPXPQPPPPPXXXXVLFXR 495
           P P P PPPPP     LF R
Sbjct: 106 PPPPPPPPPPPPPPPPLFTR 125


>01_05_0501 +
           22764978-22765896,22766087-22766349,22766613-22766836,
           22767419-22767749,22767968-22768372
          Length = 713

 Score = 25.4 bits (53), Expect(2) = 9.3
 Identities = 8/11 (72%), Positives = 8/11 (72%)
 Frame = -3

Query: 554 PXPXPQPPPPP 522
           P P P PPPPP
Sbjct: 76  PPPPPPPPPPP 86



 Score = 21.4 bits (43), Expect(2) = 9.3
 Identities = 7/18 (38%), Positives = 10/18 (55%)
 Frame = -3

Query: 548 PXPQPPPPPXXXXVLFXR 495
           P P+PPPP     ++  R
Sbjct: 112 PSPRPPPPLPFSPIVIRR 129


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.312    0.137    0.446 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,591,241
Number of Sequences: 37544
Number of extensions: 301213
Number of successful extensions: 3034
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 1163
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2664
length of database: 14,793,348
effective HSP length: 83
effective length of database: 11,677,196
effective search space used: 3304646468
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.8 bits)