Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP26_F_H09
(1102 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AL451139-9|CAI15835.1| 487|Homo sapiens socius (SOC) protein. 36 0.35
AL451139-8|CAI15836.1| 520|Homo sapiens socius (SOC) protein. 36 0.35
AL451139-7|CAI15834.1| 400|Homo sapiens socius (SOC) protein. 36 0.35
AL451139-3|CAI15828.1| 277|Homo sapiens socius (SOC) protein. 36 0.35
AK094198-1|BAC04307.1| 408|Homo sapiens protein ( Homo sapiens ... 32 3.2
BC038446-1|AAH38446.1| 673|Homo sapiens SF1 protein protein. 32 4.3
BC139924-1|AAI39925.1| 584|Homo sapiens SMARCA4 protein protein. 31 5.6
BC139917-1|AAI39918.1| 584|Homo sapiens SMARCA4 protein protein. 31 5.6
U29175-1|AAB40977.1| 1647|Homo sapiens transcriptional activator... 31 7.5
D26156-1|BAA05143.1| 1647|Homo sapiens transcriptional activator... 31 7.5
BC150298-1|AAI50299.1| 1647|Homo sapiens SWI/SNF related, matrix... 31 7.5
AF254822-2|AAG24789.1| 1647|Homo sapiens SMARCA4 isoform 1 protein. 31 7.5
AF254822-1|AAG24790.1| 1679|Homo sapiens SMARCA4 isoform 2 protein. 31 7.5
AB209313-1|BAD92550.1| 1164|Homo sapiens SWI/SNF-related matrix-... 31 7.5
AK097368-1|BAC05024.1| 479|Homo sapiens protein ( Homo sapiens ... 31 9.9
AK093258-1|BAC04112.1| 512|Homo sapiens protein ( Homo sapiens ... 31 9.9
AF521018-1|AAM74202.1| 323|Homo sapiens SOCIUS protein isoform ... 31 9.9
>AL451139-9|CAI15835.1| 487|Homo sapiens socius (SOC) protein.
Length = 487
Score = 35.5 bits (78), Expect = 0.35
Identities = 16/35 (45%), Positives = 17/35 (48%)
Frame = -1
Query: 637 GXGPXPAPXPXPAXXXGXXVXGXGXRXCPXPXPSP 533
G GP P+P P P G G G CP P PSP
Sbjct: 455 GPGPGPSPGPGPGPSPG---PGPGPSPCPGPSPSP 486
>AL451139-8|CAI15836.1| 520|Homo sapiens socius (SOC) protein.
Length = 520
Score = 35.5 bits (78), Expect = 0.35
Identities = 16/35 (45%), Positives = 17/35 (48%)
Frame = -1
Query: 637 GXGPXPAPXPXPAXXXGXXVXGXGXRXCPXPXPSP 533
G GP P+P P P G G G CP P PSP
Sbjct: 488 GPGPGPSPGPGPGPSPG---PGPGPSPCPGPSPSP 519
>AL451139-7|CAI15834.1| 400|Homo sapiens socius (SOC) protein.
Length = 400
Score = 35.5 bits (78), Expect = 0.35
Identities = 16/35 (45%), Positives = 17/35 (48%)
Frame = -1
Query: 637 GXGPXPAPXPXPAXXXGXXVXGXGXRXCPXPXPSP 533
G GP P+P P P G G G CP P PSP
Sbjct: 368 GPGPGPSPGPGPGPSPG---PGPGPSPCPGPSPSP 399
>AL451139-3|CAI15828.1| 277|Homo sapiens socius (SOC) protein.
Length = 277
Score = 35.5 bits (78), Expect = 0.35
Identities = 16/35 (45%), Positives = 17/35 (48%)
Frame = -1
Query: 637 GXGPXPAPXPXPAXXXGXXVXGXGXRXCPXPXPSP 533
G GP P+P P P G G G CP P PSP
Sbjct: 245 GPGPGPSPGPGPGPSPG---PGPGPSPCPGPSPSP 276
>AK094198-1|BAC04307.1| 408|Homo sapiens protein ( Homo sapiens
cDNA FLJ36879 fis, clone BGGI11000193. ).
Length = 408
Score = 32.3 bits (70), Expect = 3.2
Identities = 16/40 (40%), Positives = 17/40 (42%), Gaps = 5/40 (12%)
Frame = -1
Query: 637 GXGPXPAPXPXPAXXXGXXV-----XGXGXRXCPXPXPSP 533
G GP P+P P P G G G CP P PSP
Sbjct: 368 GPGPGPSPGPGPGPSPGPGPGPSPGPGPGPSPCPGPSPSP 407
>BC038446-1|AAH38446.1| 673|Homo sapiens SF1 protein protein.
Length = 673
Score = 31.9 bits (69), Expect = 4.3
Identities = 19/55 (34%), Positives = 20/55 (36%)
Frame = -2
Query: 399 PXAGALAPXAXQSPXXSRXLFXSVPTLLVVXXFXXXXPPPPXGPPXPXXXXVXPP 235
P AG LAP P S+ L F PPPP PP P PP
Sbjct: 38 PGAGLLAPGPPPPPPVG-----SMGALTAAFPFAALPPPPPPPPPPPPQQPPPPP 87
>BC139924-1|AAI39925.1| 584|Homo sapiens SMARCA4 protein protein.
Length = 584
Score = 31.5 bits (68), Expect = 5.6
Identities = 15/38 (39%), Positives = 15/38 (39%)
Frame = -1
Query: 637 GXGPXPAPXPXPAXXXGXXVXGXGXRXCPXPXPSPPXP 524
G GP P P P PA G G P P PS P
Sbjct: 233 GPGPGPGPGPGPAPPNHSRPHGMGGPNMPPPGPSGVPP 270
>BC139917-1|AAI39918.1| 584|Homo sapiens SMARCA4 protein protein.
Length = 584
Score = 31.5 bits (68), Expect = 5.6
Identities = 15/38 (39%), Positives = 15/38 (39%)
Frame = -1
Query: 637 GXGPXPAPXPXPAXXXGXXVXGXGXRXCPXPXPSPPXP 524
G GP P P P PA G G P P PS P
Sbjct: 233 GPGPGPGPGPGPAPPNHSRPHGMGGPNMPPPGPSGVPP 270
>U29175-1|AAB40977.1| 1647|Homo sapiens transcriptional activator
protein.
Length = 1647
Score = 31.1 bits (67), Expect = 7.5
Identities = 15/38 (39%), Positives = 15/38 (39%)
Frame = -1
Query: 637 GXGPXPAPXPXPAXXXGXXVXGXGXRXCPXPXPSPPXP 524
G GP P P P PA G G P P PS P
Sbjct: 233 GPGPGPGPGPGPAPPNYSRPHGMGGPNMPPPGPSGVPP 270
>D26156-1|BAA05143.1| 1647|Homo sapiens transcriptional activator
hSNF2b protein.
Length = 1647
Score = 31.1 bits (67), Expect = 7.5
Identities = 15/38 (39%), Positives = 15/38 (39%)
Frame = -1
Query: 637 GXGPXPAPXPXPAXXXGXXVXGXGXRXCPXPXPSPPXP 524
G GP P P P PA G G P P PS P
Sbjct: 233 GPGPGPGPGPGPAPPNYSRPHGMGGPNMPPPGPSGVPP 270
>BC150298-1|AAI50299.1| 1647|Homo sapiens SWI/SNF related, matrix
associated, actin dependent regulator of chromatin, sub
protein.
Length = 1647
Score = 31.1 bits (67), Expect = 7.5
Identities = 15/38 (39%), Positives = 15/38 (39%)
Frame = -1
Query: 637 GXGPXPAPXPXPAXXXGXXVXGXGXRXCPXPXPSPPXP 524
G GP P P P PA G G P P PS P
Sbjct: 233 GPGPGPGPGPGPAPPNYSRPHGMGGPNMPPPGPSGVPP 270
>AF254822-2|AAG24789.1| 1647|Homo sapiens SMARCA4 isoform 1 protein.
Length = 1647
Score = 31.1 bits (67), Expect = 7.5
Identities = 15/38 (39%), Positives = 15/38 (39%)
Frame = -1
Query: 637 GXGPXPAPXPXPAXXXGXXVXGXGXRXCPXPXPSPPXP 524
G GP P P P PA G G P P PS P
Sbjct: 233 GPGPGPGPGPGPAPPNYSRPHGMGGPNMPPPGPSGVPP 270
>AF254822-1|AAG24790.1| 1679|Homo sapiens SMARCA4 isoform 2 protein.
Length = 1679
Score = 31.1 bits (67), Expect = 7.5
Identities = 15/38 (39%), Positives = 15/38 (39%)
Frame = -1
Query: 637 GXGPXPAPXPXPAXXXGXXVXGXGXRXCPXPXPSPPXP 524
G GP P P P PA G G P P PS P
Sbjct: 233 GPGPGPGPGPGPAPPNYSRPHGMGGPNMPPPGPSGVPP 270
>AB209313-1|BAD92550.1| 1164|Homo sapiens SWI/SNF-related
matrix-associated actin-dependent regulator of chromatin
a4 var protein.
Length = 1164
Score = 31.1 bits (67), Expect = 7.5
Identities = 15/38 (39%), Positives = 15/38 (39%)
Frame = -1
Query: 637 GXGPXPAPXPXPAXXXGXXVXGXGXRXCPXPXPSPPXP 524
G GP P P P PA G G P P PS P
Sbjct: 190 GPGPGPGPGPGPAPPNYSRPHGMGGPNMPPPGPSGVPP 227
>AK097368-1|BAC05024.1| 479|Homo sapiens protein ( Homo sapiens
cDNA FLJ40049 fis, clone SYNOV2001708. ).
Length = 479
Score = 30.7 bits (66), Expect = 9.9
Identities = 14/32 (43%), Positives = 14/32 (43%)
Frame = -1
Query: 628 PXPAPXPXPAXXXGXXVXGXGXRXCPXPXPSP 533
P P P P P G G G CP P PSP
Sbjct: 450 PGPCPGPGPGPSPGP---GPGSSPCPGPSPSP 478
>AK093258-1|BAC04112.1| 512|Homo sapiens protein ( Homo sapiens
cDNA FLJ35939 fis, clone TESTI2011605. ).
Length = 512
Score = 30.7 bits (66), Expect = 9.9
Identities = 14/32 (43%), Positives = 14/32 (43%)
Frame = -1
Query: 628 PXPAPXPXPAXXXGXXVXGXGXRXCPXPXPSP 533
P P P P P G G G CP P PSP
Sbjct: 483 PGPCPGPGPGPSPGP---GPGSSPCPGPSPSP 511
>AF521018-1|AAM74202.1| 323|Homo sapiens SOCIUS protein isoform 2
protein.
Length = 323
Score = 30.7 bits (66), Expect = 9.9
Identities = 14/32 (43%), Positives = 14/32 (43%)
Frame = -1
Query: 628 PXPAPXPXPAXXXGXXVXGXGXRXCPXPXPSP 533
P P P P P G G G CP P PSP
Sbjct: 294 PGPCPGPGPGPSPGP---GPGSSPCPGPSPSP 322
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.312 0.137 0.446
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 87,402,870
Number of Sequences: 237096
Number of extensions: 1578730
Number of successful extensions: 11053
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 3621
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9473
length of database: 76,859,062
effective HSP length: 91
effective length of database: 55,283,326
effective search space used: 15202914650
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.8 bits)
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