Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP26_F_H06
         (888 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

01_05_0037 - 17452503-17452523,17452594-17452689,17453315-174534...    33   0.40 
06_02_0361 - 15168735-15168754,15168783-15169248                       31   0.93 
10_07_0051 - 12373146-12373517,12375836-12376105,12377560-12377799     29   6.5  
04_04_1229 - 31906854-31907300,31907986-31908181,31908631-319087...    29   6.5  
12_02_1189 - 26804775-26804930,26805020-26805123,26805346-268056...    28   8.6  
10_08_0272 - 16387422-16387427,16387428-16387526,16387688-163881...    28   8.6  

>01_05_0037 -
           17452503-17452523,17452594-17452689,17453315-17453419,
           17453699-17453869,17454309-17454378,17454698-17454879,
           17457297-17457406,17458353-17458457,17458537-17458615,
           17458722-17458762,17459019-17459097,17460620-17460814
          Length = 417

 Score = 32.7 bits (71), Expect = 0.40
 Identities = 21/62 (33%), Positives = 31/62 (50%), Gaps = 2/62 (3%)
 Frame = -1

Query: 342 QSRGQNLGSFLGRHIYRYRLSDIPLYTGIRLCSTLASPMG--RA*VSPSLSTSLGRNVLG 169
           QS   NLG   GRH+    + + P Y  ++ C  L + +G   A +   L T+L  N+L 
Sbjct: 121 QSLAANLGIITGRHLAELCMGEYPKY--VKYCLWLLAELGVIAATIPGVLGTALAYNMLL 178

Query: 168 HI 163
           HI
Sbjct: 179 HI 180


>06_02_0361 - 15168735-15168754,15168783-15169248
          Length = 161

 Score = 31.5 bits (68), Expect = 0.93
 Identities = 20/75 (26%), Positives = 31/75 (41%), Gaps = 4/75 (5%)
 Frame = +3

Query: 213 PMPCPLVRQEYCKAGCLCKEGYLKD---DSGKCVARENCPNSDLCSENEIYV-KCVQAQC 380
           P PCP   Q+     C     +L D   +  K  A +N   S L  EN+ +  +    + 
Sbjct: 44  PEPCPSCHQDVVLDSCQETTSFLHDASLEKEKLQAMDNLETSTLEDENDTFEHESFSFKF 103

Query: 381 SPMTCSKKDGPKICP 425
              +CS K+  + CP
Sbjct: 104 PQESCSHKESSEFCP 118


>10_07_0051 - 12373146-12373517,12375836-12376105,12377560-12377799
          Length = 293

 Score = 28.7 bits (61), Expect = 6.5
 Identities = 15/36 (41%), Positives = 21/36 (58%)
 Frame = -1

Query: 651 RLCRTFPPPMGRS*DRPSLSTSLGCTVLGHSSHIFH 544
           R C++ P   GR+ + P+LS+S   TV G  SH  H
Sbjct: 228 RRCQSSPIRGGRAQEMPTLSSSTPSTVGGLGSHCRH 263


>04_04_1229 -
           31906854-31907300,31907986-31908181,31908631-31908756,
           31909962-31910329,31910680-31910835,31910968-31911168,
           31911230-31911375,31911439-31911865,31912527-31912627,
           31913197-31913254
          Length = 741

 Score = 28.7 bits (61), Expect = 6.5
 Identities = 13/39 (33%), Positives = 19/39 (48%)
 Frame = -1

Query: 597 LSTSLGCTVLGHSSHIFHFQSRGQNLGSFLGRHIYRYRL 481
           LS +LGC +   S H++     G+ +G FL       RL
Sbjct: 194 LSMALGCNISLTSLHLYEVHISGEEIGQFLSNSFALERL 232


>12_02_1189 -
           26804775-26804930,26805020-26805123,26805346-26805610,
           26805697-26805795,26806284-26806425,26806516-26806621,
           26806718-26806785,26806870-26806929,26807292-26807566,
           26807671-26807748,26808137-26808391,26809167-26809199,
           26809312-26809444,26810060-26810202,26810249-26810327,
           26810434-26810533,26811278-26811521,26811620-26811735,
           26811845-26812004,26812347-26812574
          Length = 947

 Score = 28.3 bits (60), Expect = 8.6
 Identities = 12/40 (30%), Positives = 21/40 (52%)
 Frame = -2

Query: 665 FTHASGFAGLFLHQWADLRTVLL*ARHWAALCLDTVHIYF 546
           F +++G  GLF    +  + +++     A LCL  +H YF
Sbjct: 354 FDYSAGMQGLFSRTASPFQDIIVGKYESALLCLGNLHCYF 393


>10_08_0272 -
           16387422-16387427,16387428-16387526,16387688-16388122,
           16388408-16388738,16390821-16390961,16391668-16391736,
           16392077-16392312
          Length = 438

 Score = 28.3 bits (60), Expect = 8.6
 Identities = 17/60 (28%), Positives = 25/60 (41%)
 Frame = -2

Query: 290 IVFQISLFTQASGFAVLLPHQWAGHR*VLL*ARPWAAMCLDTFHVYFIFRAEVSCTEDDD 111
           +V  + LF +       LP  WA H  V   +  W  +  D+ H Y +F       E+DD
Sbjct: 225 VVQMLDLFNKNKSLMPDLPGPWAPHWPVSAASDIWVTITGDSSH-YILFYGRAVYVEEDD 283


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 26,045,324
Number of Sequences: 37544
Number of extensions: 630455
Number of successful extensions: 1802
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 986
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1801
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2495239620
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)