Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP26_F_H03
         (916 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

03_02_0109 + 5671418-5671631,5675610-5675690,5676249-5676340,567...    32   0.55 
01_06_0909 - 32903520-32903828,32903899-32903973,32904068-329042...    32   0.73 
07_03_0037 + 12709014-12709104,12709407-12709612,12710033-127100...    29   6.8  

>03_02_0109 +
           5671418-5671631,5675610-5675690,5676249-5676340,
           5676433-5676513,5676594-5676691,5676872-5676953,
           5677050-5677088
          Length = 228

 Score = 32.3 bits (70), Expect = 0.55
 Identities = 11/34 (32%), Positives = 20/34 (58%)
 Frame = +2

Query: 287 GFLPSAINFLRMVPVLGSLLNLPIIRGIVDRIAG 388
           GF P+ + FL+ +P++G +   P +   +DR  G
Sbjct: 190 GFWPTLVVFLQRIPIIGWIFQQPFVTSFLDRYRG 223


>01_06_0909 -
           32903520-32903828,32903899-32903973,32904068-32904235,
           32904508-32904565,32904638-32904879,32905145-32905216,
           32905865-32905943,32906734-32907062,32907137-32907256,
           32907355-32907429,32908260-32908342,32908942-32908984,
           32909271-32909429,32910203-32910281,32910685-32910755,
           32910847-32910946,32911023-32911229,32911348-32911442,
           32912362-32912436,32912621-32912713,32913078-32913182,
           32913851-32913921,32914943-32915096,32916035-32916098,
           32916717-32916800,32917543-32917589,32918352-32918411,
           32918521-32918592
          Length = 1062

 Score = 31.9 bits (69), Expect = 0.73
 Identities = 12/25 (48%), Positives = 16/25 (64%)
 Frame = -1

Query: 358 YRKIQ*RPQNWYHP*EINGRRQESY 284
           YRK+Q +P NW H  + NG  +E Y
Sbjct: 467 YRKVQLKPSNWVHIPKSNGNGKEEY 491


>07_03_0037 +
           12709014-12709104,12709407-12709612,12710033-12710097,
           12710143-12710404,12711332-12711448,12711779-12712056,
           12712304-12712406
          Length = 373

 Score = 28.7 bits (61), Expect = 6.8
 Identities = 11/32 (34%), Positives = 20/32 (62%)
 Frame = -1

Query: 424 SALESYHVPTIVSRYPIDDPSYYRKIQ*RPQN 329
           S L+ Y +P    R+P+ DP+   ++Q RP++
Sbjct: 316 SLLDYYPLPKRGERFPVSDPNMMPRLQPRPES 347


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,495,929
Number of Sequences: 37544
Number of extensions: 235490
Number of successful extensions: 503
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 495
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 503
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2600672280
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)