Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP26_F_H03
         (916 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U23521-7|AAC46811.2|  141|Caenorhabditis elegans Hypothetical pr...    38   0.013
U20864-7|AAK68357.1|  859|Caenorhabditis elegans Hypothetical pr...    32   0.50 
U20864-6|AAK68356.1| 1000|Caenorhabditis elegans Hypothetical pr...    32   0.50 
Z75554-1|CAA99953.3|  681|Caenorhabditis elegans Hypothetical pr...    31   0.87 
AJ277649-1|CAB90211.1|  917|Caenorhabditis elegans CHE-14 protei...    29   3.5  
AF067618-5|AAC19198.2|  917|Caenorhabditis elegans Abnormal chem...    29   3.5  
Z48583-4|CAN99691.1| 3394|Caenorhabditis elegans Hypothetical pr...    28   8.1  
Z48583-3|CAA88472.1| 3396|Caenorhabditis elegans Hypothetical pr...    28   8.1  

>U23521-7|AAC46811.2|  141|Caenorhabditis elegans Hypothetical
           protein F41C3.4 protein.
          Length = 141

 Score = 37.5 bits (83), Expect = 0.013
 Identities = 15/33 (45%), Positives = 23/33 (69%)
 Frame = +2

Query: 287 GFLPSAINFLRMVPVLGSLLNLPIIRGIVDRIA 385
           GFLP  +N LR +P + ++  LP IR ++DR+A
Sbjct: 102 GFLPGIVNLLRSIPGISTITYLPGIRQVLDRLA 134


>U20864-7|AAK68357.1|  859|Caenorhabditis elegans Hypothetical
           protein F32A5.2b protein.
          Length = 859

 Score = 32.3 bits (70), Expect = 0.50
 Identities = 17/37 (45%), Positives = 22/37 (59%), Gaps = 2/37 (5%)
 Frame = -3

Query: 287 LLPMARRPLSNNRSTPRNR-NVIPKPARPTP-IFCVS 183
           L  + RRP +N R  PR R N+I    RPTP +F V+
Sbjct: 140 LQTVTRRPFANRRPAPRQRTNIIRPTIRPTPRVFTVT 176


>U20864-6|AAK68356.1| 1000|Caenorhabditis elegans Hypothetical
           protein F32A5.2a protein.
          Length = 1000

 Score = 32.3 bits (70), Expect = 0.50
 Identities = 17/37 (45%), Positives = 22/37 (59%), Gaps = 2/37 (5%)
 Frame = -3

Query: 287 LLPMARRPLSNNRSTPRNR-NVIPKPARPTP-IFCVS 183
           L  + RRP +N R  PR R N+I    RPTP +F V+
Sbjct: 281 LQTVTRRPFANRRPAPRQRTNIIRPTIRPTPRVFTVT 317


>Z75554-1|CAA99953.3|  681|Caenorhabditis elegans Hypothetical
           protein ZC455.1 protein.
          Length = 681

 Score = 31.5 bits (68), Expect = 0.87
 Identities = 23/68 (33%), Positives = 31/68 (45%)
 Frame = -3

Query: 401 SDHCFPLSYRRSLLLSEDSVATPKLVPSLRN*WQKAGILLPMARRPLSNNRSTPRNRNVI 222
           S HCF  + R S   S  S+ +P LVP +R        +  +   PLS+  STP    +I
Sbjct: 57  SPHCFLPTTRDS---SPRSIPSPSLVP-MRPDSSSDITINELHHSPLSHTGSTPEPTEII 112

Query: 221 PKPARPTP 198
            KP    P
Sbjct: 113 SKPTSKVP 120


>AJ277649-1|CAB90211.1|  917|Caenorhabditis elegans CHE-14 protein
           protein.
          Length = 917

 Score = 29.5 bits (63), Expect = 3.5
 Identities = 14/27 (51%), Positives = 16/27 (59%)
 Frame = +3

Query: 444 FLCINKTKTLNSV*YLDDCVRVSVKFM 524
           FLC N T  L S  YLD C+R S  F+
Sbjct: 647 FLCCNMTNPLFSDSYLDFCLRNSTSFL 673


>AF067618-5|AAC19198.2|  917|Caenorhabditis elegans Abnormal
           chemotaxis protein 14 protein.
          Length = 917

 Score = 29.5 bits (63), Expect = 3.5
 Identities = 14/27 (51%), Positives = 16/27 (59%)
 Frame = +3

Query: 444 FLCINKTKTLNSV*YLDDCVRVSVKFM 524
           FLC N T  L S  YLD C+R S  F+
Sbjct: 647 FLCCNMTNPLFSDSYLDFCLRNSTSFL 673


>Z48583-4|CAN99691.1| 3394|Caenorhabditis elegans Hypothetical protein
            F54B3.1b protein.
          Length = 3394

 Score = 28.3 bits (60), Expect = 8.1
 Identities = 11/19 (57%), Positives = 12/19 (63%)
 Frame = -3

Query: 245  TPRNRNVIPKPARPTPIFC 189
            TP NRNV P+ A   P FC
Sbjct: 1252 TPNNRNVFPEEATTFPSFC 1270


>Z48583-3|CAA88472.1| 3396|Caenorhabditis elegans Hypothetical protein
            F54B3.1a protein.
          Length = 3396

 Score = 28.3 bits (60), Expect = 8.1
 Identities = 11/19 (57%), Positives = 12/19 (63%)
 Frame = -3

Query: 245  TPRNRNVIPKPARPTPIFC 189
            TP NRNV P+ A   P FC
Sbjct: 1252 TPNNRNVFPEEATTFPSFC 1270


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,493,875
Number of Sequences: 27780
Number of extensions: 216139
Number of successful extensions: 505
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 478
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 499
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2339274014
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)