Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP26_F_G20
         (822 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

01_01_1008 - 7987936-7988628,7988923-7989102                           33   0.21 
08_02_1006 - 23484861-23485409,23486327-23486488,23486584-23487165     30   2.6  
12_01_0816 + 7502669-7503145                                           29   4.5  
10_02_0167 - 6100676-6102111,6102174-6102708,6102967-6103975,610...    29   5.9  
03_02_0916 + 12364557-12364906,12365485-12365592,12365731-12366343     29   5.9  
10_08_0940 - 21708557-21708733,21709058-21709142,21709330-217095...    28   7.8  
10_05_0078 + 8891364-8891529,8891535-8891797                           28   7.8  

>01_01_1008 - 7987936-7988628,7988923-7989102
          Length = 290

 Score = 33.5 bits (73), Expect = 0.21
 Identities = 14/36 (38%), Positives = 22/36 (61%)
 Frame = -3

Query: 718 RKRHASRREKGGQVSGKRQGRNQESARGSFQGETPG 611
           R R   RR  GG+V+G+   R++   RG+++GE  G
Sbjct: 239 RVRRRGRRGGGGEVNGEEAARSRRRRRGAWEGEEEG 274


>08_02_1006 - 23484861-23485409,23486327-23486488,23486584-23487165
          Length = 430

 Score = 29.9 bits (64), Expect = 2.6
 Identities = 16/40 (40%), Positives = 22/40 (55%)
 Frame = -1

Query: 630 SRGKRLVSL*SCRVSPPLT*ASIFVMLVQGGGAYGKTPAT 511
           SRGK L+S  + R  PP   + + V+ + GGG  G  P T
Sbjct: 25  SRGKSLLSPSTPRSPPPSYGSIVTVLSIDGGGVRGIIPGT 64


>12_01_0816 + 7502669-7503145
          Length = 158

 Score = 29.1 bits (62), Expect = 4.5
 Identities = 16/44 (36%), Positives = 22/44 (50%)
 Frame = -2

Query: 815 RRSGRAERGVRAHSPAWSERPTPN*DTYSVSYEKAPRFPKGERR 684
           R SG  +R V    PAW ER   + ++ +V  E+A      ERR
Sbjct: 8   RSSGEGDRPVARWWPAWQEREKESLESSAVEGERATAEVGSERR 51


>10_02_0167 -
           6100676-6102111,6102174-6102708,6102967-6103975,
           6104006-6105036
          Length = 1336

 Score = 28.7 bits (61), Expect = 5.9
 Identities = 18/43 (41%), Positives = 23/43 (53%), Gaps = 1/43 (2%)
 Frame = -1

Query: 732 QREL*ESATLPEGRKAD-RYPVSGRVGTRRAHEGASRGKRLVS 607
           QREL   AT P     D R  ++GR   RR  + A+R +R VS
Sbjct: 32  QRELPRQATPPPRGTGDLRDQINGRRKARRTRDDANRSRRHVS 74


>03_02_0916 + 12364557-12364906,12365485-12365592,12365731-12366343
          Length = 356

 Score = 28.7 bits (61), Expect = 5.9
 Identities = 22/56 (39%), Positives = 25/56 (44%), Gaps = 4/56 (7%)
 Frame = +1

Query: 346 PLPRSLTRCARSF--GCGERYQLTQRR*YGYPQNQGITQ--ERTCEQKASKRPGTV 501
           P PRS  RC      GCG R Q TQR     P N  IT   E TC   ++  P  +
Sbjct: 150 PYPRSYYRCTHKLDQGCGARRQ-TQRC-EADPSNYDITYYGEHTCRDPSTIIPTAI 203


>10_08_0940 -
           21708557-21708733,21709058-21709142,21709330-21709551,
           21710640-21710815,21711883-21711946,21712433-21712507,
           21715114-21715199,21715297-21716715
          Length = 767

 Score = 28.3 bits (60), Expect = 7.8
 Identities = 15/31 (48%), Positives = 20/31 (64%), Gaps = 3/31 (9%)
 Frame = +1

Query: 295 NESAN---ARGEAVCVLGALPLPRSLTRCAR 378
           +ESAN   AR EAV  +G +P+   L RC+R
Sbjct: 434 DESANVDAARSEAVMRVGGIPMLLDLARCSR 464


>10_05_0078 + 8891364-8891529,8891535-8891797
          Length = 142

 Score = 28.3 bits (60), Expect = 7.8
 Identities = 11/22 (50%), Positives = 14/22 (63%)
 Frame = +2

Query: 635 PSCALLVPTLPLTGYLSAFLPS 700
           P CA L P +P+ G L  F+PS
Sbjct: 92  PPCAFLPPDVPVEGILMIFVPS 113


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,099,226
Number of Sequences: 37544
Number of extensions: 488205
Number of successful extensions: 1541
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 1484
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1541
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2256438528
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)