Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP26_F_G18
(1207 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF000298-11|AAM97960.1| 518|Caenorhabditis elegans Prion-like-(... 38 0.019
AF000298-10|AAM97961.1| 539|Caenorhabditis elegans Prion-like-(... 38 0.019
AF000298-8|AAC48255.2| 524|Caenorhabditis elegans Prion-like-(q... 38 0.019
U58751-5|AAN84882.1| 781|Caenorhabditis elegans Wasp (actin cyt... 34 0.23
U58751-4|AAN84881.1| 607|Caenorhabditis elegans Wasp (actin cyt... 34 0.23
U41557-6|AAA83307.1| 589|Caenorhabditis elegans Collagen sequen... 33 0.53
AL032652-4|CAB63398.1| 486|Caenorhabditis elegans Hypothetical ... 32 0.93
Z77655-1|CAB01137.1| 393|Caenorhabditis elegans Hypothetical pr... 31 1.2
Z68753-3|CAA92988.3| 984|Caenorhabditis elegans Hypothetical pr... 31 1.6
AL031635-4|CAA21043.2| 269|Caenorhabditis elegans Hypothetical ... 31 2.2
AF000193-3|AAB52890.1| 259|Caenorhabditis elegans Hypothetical ... 31 2.2
Z98866-8|CAB11562.2| 425|Caenorhabditis elegans Hypothetical pr... 30 2.8
Z93374-5|CAB07557.1| 935|Caenorhabditis elegans Hypothetical pr... 30 3.8
U41557-2|AAA83301.1| 309|Caenorhabditis elegans Hypothetical pr... 30 3.8
Z77662-5|CAB01192.2| 579|Caenorhabditis elegans Hypothetical pr... 29 6.6
U41543-12|AAZ91345.1| 401|Caenorhabditis elegans Groundhog (hed... 29 6.6
AF000198-8|AAP68908.1| 435|Caenorhabditis elegans Collagen prot... 29 6.6
Z79596-1|CAB01857.1| 830|Caenorhabditis elegans Hypothetical pr... 29 8.7
U41538-2|AAG00010.1| 997|Caenorhabditis elegans Hypothetical pr... 29 8.7
L29031-1|AAB72228.2| 830|Caenorhabditis elegans dynamin protein. 29 8.7
AF039052-9|AAF98625.1| 302|Caenorhabditis elegans Hypothetical ... 29 8.7
>AF000298-11|AAM97960.1| 518|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform b protein.
Length = 518
Score = 37.5 bits (83), Expect = 0.019
Identities = 32/108 (29%), Positives = 36/108 (33%), Gaps = 7/108 (6%)
Frame = +1
Query: 901 QTHXQXTFRGXPXXP--NSXPXPXPRSPAXXTXPAXTXPGXQXKGXXPPGRXXG---PST 1065
Q Q FRG P S P P P + + + P G PP R P T
Sbjct: 218 QQQTQNGFRGKRQAPPAGSPPPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPT 277
Query: 1066 XSXXXPXXXMXPPXXPXXAPXXPYXT--XPPTXXAXPXXALXXXPPAG 1203
S P PP +P P PPT P A PPAG
Sbjct: 278 GSPPPPPAGGSPPPPRAGSPPPPPPPRGSPPTGSLPPPQAGGSPPPAG 325
Score = 31.1 bits (67), Expect = 1.6
Identities = 22/92 (23%), Positives = 27/92 (29%), Gaps = 2/92 (2%)
Frame = +1
Query: 934 PXXPNSXPXPXPRSPAXXTXPAXTXPGXQXKGXXPPGRXXG--PSTXSXXXPXXXMXPPX 1107
P P + P PR+ + P + P G PP R P P PP
Sbjct: 256 PPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPPPPPPRGSPPTGSLPPP 315
Query: 1108 XPXXAPXXPYXTXPPTXXAXPXXALXXXPPAG 1203
+P PP A PP G
Sbjct: 316 QAGGSPPPAGTGSPPPPPRQKRQAPERSPPTG 347
Score = 29.1 bits (62), Expect = 6.6
Identities = 22/91 (24%), Positives = 26/91 (28%), Gaps = 1/91 (1%)
Frame = +1
Query: 934 PXXPNSXPXPXPRSPAXXTXPAXT-XPGXQXKGXXPPGRXXGPSTXSXXXPXXXMXPPXX 1110
P P P P P + A + P +G P G P P PP
Sbjct: 273 PPPPTGSPPPPPAGGSPPPPRAGSPPPPPPPRGSPPTGSLPPPQAGGSPPPAGTGSPPPP 332
Query: 1111 PXXAPXXPYXTXPPTXXAXPXXALXXXPPAG 1203
P P + PPT PP G
Sbjct: 333 PRQKRQAPERS-PPTGSPPTGSPPTGRPPRG 362
>AF000298-10|AAM97961.1| 539|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform c protein.
Length = 539
Score = 37.5 bits (83), Expect = 0.019
Identities = 32/108 (29%), Positives = 36/108 (33%), Gaps = 7/108 (6%)
Frame = +1
Query: 901 QTHXQXTFRGXPXXP--NSXPXPXPRSPAXXTXPAXTXPGXQXKGXXPPGRXXG---PST 1065
Q Q FRG P S P P P + + + P G PP R P T
Sbjct: 239 QQQTQNGFRGKRQAPPAGSPPPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPT 298
Query: 1066 XSXXXPXXXMXPPXXPXXAPXXPYXT--XPPTXXAXPXXALXXXPPAG 1203
S P PP +P P PPT P A PPAG
Sbjct: 299 GSPPPPPAGGSPPPPRAGSPPPPPPPRGSPPTGSLPPPQAGGSPPPAG 346
Score = 31.1 bits (67), Expect = 1.6
Identities = 22/92 (23%), Positives = 27/92 (29%), Gaps = 2/92 (2%)
Frame = +1
Query: 934 PXXPNSXPXPXPRSPAXXTXPAXTXPGXQXKGXXPPGRXXG--PSTXSXXXPXXXMXPPX 1107
P P + P PR+ + P + P G PP R P P PP
Sbjct: 277 PPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPPPPPPRGSPPTGSLPPP 336
Query: 1108 XPXXAPXXPYXTXPPTXXAXPXXALXXXPPAG 1203
+P PP A PP G
Sbjct: 337 QAGGSPPPAGTGSPPPPPRQKRQAPERSPPTG 368
Score = 29.1 bits (62), Expect = 6.6
Identities = 22/91 (24%), Positives = 26/91 (28%), Gaps = 1/91 (1%)
Frame = +1
Query: 934 PXXPNSXPXPXPRSPAXXTXPAXT-XPGXQXKGXXPPGRXXGPSTXSXXXPXXXMXPPXX 1110
P P P P P + A + P +G P G P P PP
Sbjct: 294 PPPPTGSPPPPPAGGSPPPPRAGSPPPPPPPRGSPPTGSLPPPQAGGSPPPAGTGSPPPP 353
Query: 1111 PXXAPXXPYXTXPPTXXAXPXXALXXXPPAG 1203
P P + PPT PP G
Sbjct: 354 PRQKRQAPERS-PPTGSPPTGSPPTGRPPRG 383
>AF000298-8|AAC48255.2| 524|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform a protein.
Length = 524
Score = 37.5 bits (83), Expect = 0.019
Identities = 32/108 (29%), Positives = 36/108 (33%), Gaps = 7/108 (6%)
Frame = +1
Query: 901 QTHXQXTFRGXPXXP--NSXPXPXPRSPAXXTXPAXTXPGXQXKGXXPPGRXXG---PST 1065
Q Q FRG P S P P P + + + P G PP R P T
Sbjct: 224 QQQTQNGFRGKRQAPPAGSPPPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPT 283
Query: 1066 XSXXXPXXXMXPPXXPXXAPXXPYXT--XPPTXXAXPXXALXXXPPAG 1203
S P PP +P P PPT P A PPAG
Sbjct: 284 GSPPPPPAGGSPPPPRAGSPPPPPPPRGSPPTGSLPPPQAGGSPPPAG 331
Score = 31.1 bits (67), Expect = 1.6
Identities = 22/92 (23%), Positives = 27/92 (29%), Gaps = 2/92 (2%)
Frame = +1
Query: 934 PXXPNSXPXPXPRSPAXXTXPAXTXPGXQXKGXXPPGRXXG--PSTXSXXXPXXXMXPPX 1107
P P + P PR+ + P + P G PP R P P PP
Sbjct: 262 PPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPPPPPPRGSPPTGSLPPP 321
Query: 1108 XPXXAPXXPYXTXPPTXXAXPXXALXXXPPAG 1203
+P PP A PP G
Sbjct: 322 QAGGSPPPAGTGSPPPPPRQKRQAPERSPPTG 353
Score = 29.1 bits (62), Expect = 6.6
Identities = 22/91 (24%), Positives = 26/91 (28%), Gaps = 1/91 (1%)
Frame = +1
Query: 934 PXXPNSXPXPXPRSPAXXTXPAXT-XPGXQXKGXXPPGRXXGPSTXSXXXPXXXMXPPXX 1110
P P P P P + A + P +G P G P P PP
Sbjct: 279 PPPPTGSPPPPPAGGSPPPPRAGSPPPPPPPRGSPPTGSLPPPQAGGSPPPAGTGSPPPP 338
Query: 1111 PXXAPXXPYXTXPPTXXAXPXXALXXXPPAG 1203
P P + PPT PP G
Sbjct: 339 PRQKRQAPERS-PPTGSPPTGSPPTGRPPRG 368
>U58751-5|AAN84882.1| 781|Caenorhabditis elegans Wasp (actin
cytoskeleton modulator)homolog protein 1, isoform b
protein.
Length = 781
Score = 33.9 bits (74), Expect = 0.23
Identities = 16/47 (34%), Positives = 19/47 (40%)
Frame = +2
Query: 746 TPRTXQXXIAPAPXPXPXXAXLXAPXXXAAPXDPPXAXPYXXPPLXA 886
TP + P P P P + AP AAP PP P P + A
Sbjct: 600 TPENRPHAVPPPPPPPPPQSFGMAPISSAAPPPPPPPPPMGLPAVGA 646
>U58751-4|AAN84881.1| 607|Caenorhabditis elegans Wasp (actin
cytoskeleton modulator)homolog protein 1, isoform a
protein.
Length = 607
Score = 33.9 bits (74), Expect = 0.23
Identities = 16/47 (34%), Positives = 19/47 (40%)
Frame = +2
Query: 746 TPRTXQXXIAPAPXPXPXXAXLXAPXXXAAPXDPPXAXPYXXPPLXA 886
TP + P P P P + AP AAP PP P P + A
Sbjct: 426 TPENRPHAVPPPPPPPPPQSFGMAPISSAAPPPPPPPPPMGLPAVGA 472
>U41557-6|AAA83307.1| 589|Caenorhabditis elegans Collagen sequence
x-hybridizingprotein 1 protein.
Length = 589
Score = 32.7 bits (71), Expect = 0.53
Identities = 45/197 (22%), Positives = 50/197 (25%), Gaps = 2/197 (1%)
Frame = +1
Query: 541 PPHPXXXGLXXYVPACPSXPXXXXPRPXIXPPAAXHPSPXAXNXSXRXVXHPXXSPXXVX 720
PPHP + PRP P + P P A V S
Sbjct: 89 PPHPSGPPHRPHPHPSRRPRPTRLPRPS-RSPHSDAPEPSAATDGFELVFGKHHSTGAPP 147
Query: 721 XNXPXSSXDPXXXPTXDRPGAXXGXXKXXXXSXXXXRGSX*PPARXTXXTSPAPRNXSXX 900
P DP P P G P P P N S
Sbjct: 148 SGGPPGPFDPSGAPPSGGPPGLFDPSGAPPSGGPP--GPFGPSGAPPSGGPPGPFNPSEA 205
Query: 901 QTHXQXTFRGXPXX-PNSXPXPXPRSPAXXTXPAXTXPGX-QXKGXXPPGRXXGPSTXSX 1074
T P P S P P +P+ P+ PG G P G GP S
Sbjct: 206 PPSGGPTGPFDPSGAPPSGGPPGPFNPSG-APPSGGPPGPFDPSGAPPSGGPPGPFNPSG 264
Query: 1075 XXPXXXMXPPXXPXXAP 1125
P P P AP
Sbjct: 265 APPSGGPPGPFDPSGAP 281
Score = 28.7 bits (61), Expect = 8.7
Identities = 23/78 (29%), Positives = 26/78 (33%), Gaps = 2/78 (2%)
Frame = +1
Query: 943 PNSXPXPXPRSPAXXTXPAXTXPGX-QXKGXXPPGRXXGPSTXSXXXPXXXMXPPXXPXX 1119
P S P P +P+ P+ PG G P G GP S P P P
Sbjct: 461 PPSGGPPGPFNPSG-APPSGGPPGPFDPSGAPPSGGPPGPFNPSGAPPSGGPPGPFDPSG 519
Query: 1120 APXXPYXTXP-PTXXAXP 1170
AP P PT P
Sbjct: 520 APPSGMPPVPLPTDLPIP 537
>AL032652-4|CAB63398.1| 486|Caenorhabditis elegans Hypothetical
protein Y63D3A.5 protein.
Length = 486
Score = 31.9 bits (69), Expect = 0.93
Identities = 15/39 (38%), Positives = 15/39 (38%)
Frame = +2
Query: 968 PGAPXXXXXPPXRXRGLXRRXXPPQGGKXGXQXPPRXRP 1084
PG P PP G PPQGG G PP P
Sbjct: 403 PGGPGGYGPPPPGGPGAPGSYGPPQGGPGGFGPPPPGGP 441
>Z77655-1|CAB01137.1| 393|Caenorhabditis elegans Hypothetical
protein C56A3.1 protein.
Length = 393
Score = 31.5 bits (68), Expect = 1.2
Identities = 16/44 (36%), Positives = 17/44 (38%)
Frame = +1
Query: 520 CXCXXNXPPHPXXXGLXXYVPACPSXPXXXXPRPXIXPPAAXHP 651
C C P P G P PS P P+P PPAA P
Sbjct: 34 CCCGCGTP-QPASCGCAPACPQAPSCPVCPPPQPCPAPPAAYCP 76
>Z68753-3|CAA92988.3| 984|Caenorhabditis elegans Hypothetical
protein ZC518.2 protein.
Length = 984
Score = 31.1 bits (67), Expect = 1.6
Identities = 24/99 (24%), Positives = 28/99 (28%)
Frame = +2
Query: 581 PRARPAXXXXXRAHXSXLPPPXTPAPXXXTPPXXA*XTPXXLXXGXXXIXXSPLXTPRTX 760
P PA H + PP + P TPP + S P
Sbjct: 107 PSFSPATQPSMNGHHAPPPPAVSRPPAFPTPPPSVGSAAPSIQPPIPSALASARPAPFPA 166
Query: 761 QXXIAPAPXPXPXXAXLXAPXXXAAPXDPPXAXPYXXPP 877
PAP P P AP A PP + PP
Sbjct: 167 AQP-PPAPTPTPSYQQQMAPRPQAPAAYPPASQQQGYPP 204
>AL031635-4|CAA21043.2| 269|Caenorhabditis elegans Hypothetical
protein Y47D3B.6 protein.
Length = 269
Score = 30.7 bits (66), Expect = 2.2
Identities = 16/39 (41%), Positives = 17/39 (43%)
Frame = +2
Query: 773 APAPXPXPXXAXLXAPXXXAAPXDPPXAXPYXXPPLXAI 889
APAP P A L AP A P A P+ PP I
Sbjct: 65 APAPLPAYAPAPLPAPVFAAPAPAPVFAAPFAAPPAPVI 103
>AF000193-3|AAB52890.1| 259|Caenorhabditis elegans Hypothetical
protein T20B6.3 protein.
Length = 259
Score = 30.7 bits (66), Expect = 2.2
Identities = 21/81 (25%), Positives = 22/81 (27%)
Frame = -2
Query: 876 GGXXXGXAXGGSXGAAXXXGAXXXAFXGXGXGAGAIXXWXVRGVXRGXXXIXXXPXXRXX 697
GG G GG G G + G G G G G G
Sbjct: 112 GGYGGGGYGGGGDGGGGYGGYGGGGYGGMGGGPGGYGMGGYGGGGGGGGDFGGYGGGGMG 171
Query: 696 GVXYAXXGGVXXXGAGVXGGG 634
G Y G G G GGG
Sbjct: 172 GGGYGGGGDGGYGGGGFGGGG 192
>Z98866-8|CAB11562.2| 425|Caenorhabditis elegans Hypothetical
protein Y49E10.10 protein.
Length = 425
Score = 30.3 bits (65), Expect = 2.8
Identities = 22/81 (27%), Positives = 23/81 (28%)
Frame = +2
Query: 635 PPPXTPAPXXXTPPXXA*XTPXXLXXGXXXIXXSPLXTPRTXQXXIAPAPXPXPXXAXLX 814
PPP T AP PP P + P P T PAP
Sbjct: 192 PPPTTKAPP---PPTTKAPPPPTTNKEVTTVAPVPKPAPVTAPAPNPPAPENTTAKVETT 248
Query: 815 APXXXAAPXDPPXAXPYXXPP 877
P A P P P PP
Sbjct: 249 KPTKAAPPAPTPVPNPVPSPP 269
>Z93374-5|CAB07557.1| 935|Caenorhabditis elegans Hypothetical
protein C06C6.7 protein.
Length = 935
Score = 29.9 bits (64), Expect = 3.8
Identities = 11/20 (55%), Positives = 13/20 (65%)
Frame = +2
Query: 614 RAHXSXLPPPXTPAPXXXTP 673
+ H S LPPP TP+P TP
Sbjct: 870 KPHTSQLPPPPTPSPATLTP 889
>U41557-2|AAA83301.1| 309|Caenorhabditis elegans Hypothetical protein
C50F7.5 protein.
Length = 309
Score = 29.9 bits (64), Expect = 3.8
Identities = 44/196 (22%), Positives = 54/196 (27%), Gaps = 3/196 (1%)
Frame = +1
Query: 577 VPACPSXPXXXXPRPXIXPPAAXHPSPXAXNXSXRXVXHPXXSPXXVXXNXPXSSXDPXX 756
VP + P P P + PSP N S SP V P P
Sbjct: 81 VPQPSNEPSPGTVAPSDEPSPSGPPSPGPVNPSEDPQPSGPPSPGPVD---PSEDPQPSV 137
Query: 757 XPTXD-RPGAXXGXXKXXXXSXXXXRGSX*PPARXTXXTSPAPRNXSXXQTHXQXTFRGX 933
P+ D +P + + SP P + S + G
Sbjct: 138 EPSEDHQPSGPPSPGPVDPSEDPQPSVEPSEDPQPSGPPSPGPVDPSEDPQPSGSSSPG- 196
Query: 934 PXXPNSXPXPXPRSPAXXTXPAXTXPGXQXKGXXP--PGRXXGPSTXSXXXPXXXMXPPX 1107
P P+ P SP+ P P K P PG S P PP
Sbjct: 197 PVDPSDEP-----SPSGPPSPGPVDPSEDPKPSEPPSPGPVDPSDEPSPSDPPGPPGPPG 251
Query: 1108 XPXXAPXXPYXTXPPT 1155
P P P PPT
Sbjct: 252 PPTRRPPGP--PGPPT 265
>Z77662-5|CAB01192.2| 579|Caenorhabditis elegans Hypothetical
protein F47B8.5 protein.
Length = 579
Score = 29.1 bits (62), Expect = 6.6
Identities = 14/34 (41%), Positives = 14/34 (41%)
Frame = +2
Query: 773 APAPXPXPXXAXLXAPXXXAAPXDPPXAXPYXXP 874
APAP P P A P AP P A P P
Sbjct: 488 APAPAPAPEAAPAPEPAPAPAPAPAPEAAPAAAP 521
Score = 28.7 bits (61), Expect = 8.7
Identities = 14/37 (37%), Positives = 16/37 (43%)
Frame = +2
Query: 779 APXPXPXXAXLXAPXXXAAPXDPPXAXPYXXPPLXAI 889
AP P P A AP AAP P A P P+ +
Sbjct: 498 APAPEPAPAPAPAPAPEAAPAAAPDAAPAEPAPVPEV 534
>U41543-12|AAZ91345.1| 401|Caenorhabditis elegans Groundhog
(hedgehog-like family)protein 7 protein.
Length = 401
Score = 29.1 bits (62), Expect = 6.6
Identities = 27/99 (27%), Positives = 31/99 (31%), Gaps = 1/99 (1%)
Frame = +2
Query: 581 PRARPAXXXXXRAHXSXLPPPXTPAPXXXTPPXXA*XTPXXLXXGXXXIXXSPLXT-PRT 757
P +PA A PP PAP P PL + P+
Sbjct: 31 PPPKPAPYVEQSAQPQQTAPPPPPAPYPQQAVPAPAPPPAPYPQHAVPAPAPPLASYPQN 90
Query: 758 XQXXIAPAPXPXPXXAXLXAPXXXAAPXDPPXAXPYXXP 874
AP P P P A + AP AP P A P P
Sbjct: 91 AVPVPAPPPAPYPQHA-VPAPAPPPAPY-PQHAVPAPAP 127
>AF000198-8|AAP68908.1| 435|Caenorhabditis elegans Collagen protein
51 protein.
Length = 435
Score = 29.1 bits (62), Expect = 6.6
Identities = 22/82 (26%), Positives = 25/82 (30%)
Frame = -2
Query: 879 SGGXXXGXAXGGSXGAAXXXGAXXXAFXGXGXGAGAIXXWXVRGVXRGXXXIXXXPXXRX 700
+GG GG+ G A G G G GA A + G G P
Sbjct: 338 TGGGGGRADSGGAAGGAGGAGGYSGGGGGGGGGAAAGGGYNAGGGGGGAPQAAPAPQAAP 397
Query: 699 XGVXYAXXGGVXXXGAGVXGGG 634
A G G G GGG
Sbjct: 398 APAAPAGGGYNAGGGGGAGGGG 419
>Z79596-1|CAB01857.1| 830|Caenorhabditis elegans Hypothetical protein
C02C6.1a protein.
Length = 830
Score = 28.7 bits (61), Expect = 8.7
Identities = 21/81 (25%), Positives = 23/81 (28%), Gaps = 2/81 (2%)
Frame = +1
Query: 934 PXXPNSXPXPXPRSPAXXTXPAXTXPGXQXKGXXPPGRXXGPSTXSXXXPXXXM--XPPX 1107
P P S P P P+ PA PG + P G P P
Sbjct: 749 PPLPMSDYRPHPSGPSPVPRPAPAPPGGRQAPMPPRGGPGAPPPPGMRPPPGAPGGGGGM 808
Query: 1108 XPXXAPXXPYXTXPPTXXAXP 1170
P P P PP A P
Sbjct: 809 YPPLIPTRPGPGGPPPNMAPP 829
>U41538-2|AAG00010.1| 997|Caenorhabditis elegans Hypothetical protein
R04E5.8a protein.
Length = 997
Score = 28.7 bits (61), Expect = 8.7
Identities = 18/66 (27%), Positives = 21/66 (31%), Gaps = 1/66 (1%)
Frame = +2
Query: 962 PXPGAPXXXXXPPXRXRGLXRRXX-PPQGGKXGXQXPPRXRPXXVXXHPXXRXXPPXPHX 1138
P P P PP R R PP + + PP P P PP P
Sbjct: 139 PPPPPPRVPRTPPPRSPPPRRPPMTPPSPQRRPPRTPPSPEPRNPPRTPPSPIPPPPPRL 198
Query: 1139 SXHXXR 1156
+ H R
Sbjct: 199 NSHDRR 204
>L29031-1|AAB72228.2| 830|Caenorhabditis elegans dynamin protein.
Length = 830
Score = 28.7 bits (61), Expect = 8.7
Identities = 21/81 (25%), Positives = 23/81 (28%), Gaps = 2/81 (2%)
Frame = +1
Query: 934 PXXPNSXPXPXPRSPAXXTXPAXTXPGXQXKGXXPPGRXXGPSTXSXXXPXXXM--XPPX 1107
P P S P P P+ PA PG + P G P P
Sbjct: 749 PPLPMSDYRPHPSGPSPVPRPAPAPPGGRQAPMPPRGGPGAPPPPGMRPPPGAPGGGGGM 808
Query: 1108 XPXXAPXXPYXTXPPTXXAXP 1170
P P P PP A P
Sbjct: 809 YPPLIPTRPGPGGPPPNMAPP 829
>AF039052-9|AAF98625.1| 302|Caenorhabditis elegans Hypothetical
protein T22D1.2 protein.
Length = 302
Score = 28.7 bits (61), Expect = 8.7
Identities = 37/169 (21%), Positives = 43/169 (25%)
Frame = +2
Query: 626 SXLPPPXTPAPXXXTPPXXA*XTPXXLXXGXXXIXXSPLXTPRTXQXXIAPAPXPXPXXA 805
S PPP P TPP P L G P P+ P P P
Sbjct: 30 SRRPPP--PPKGTGTPPPPPTGEPQDLS-GEGNASRRPPPPPKGTG---TPPPPPTGEPQ 83
Query: 806 XLXAPXXXAAPXDPPXAXPYXXPPLXAIXVXXRLTPKXXSGGXXXXXTPXHXPXPGAPXX 985
L A A+ PP PP L+ + + P P
Sbjct: 84 DLSAEEGNASRRPPPPPKGTGTPPPPPTGEPQDLSGEGNASRRPPPPPKGTGSPPPPPTG 143
Query: 986 XXXPPXRXRGLXRRXXPPQGGKXGXQXPPRXRPXXVXXHPXXRXXPPXP 1132
RR PP G PP P + PP P
Sbjct: 144 EPQDLSGEGNASRRPPPPPKGTGSPPPPPTGEPQDLSTEGNASRRPPPP 192
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,461,172
Number of Sequences: 27780
Number of extensions: 203953
Number of successful extensions: 761
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 362
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 644
length of database: 12,740,198
effective HSP length: 83
effective length of database: 10,434,458
effective search space used: 3318157644
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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