Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP26_F_G16
         (891 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z79754-13|CAB02101.1|  153|Caenorhabditis elegans Hypothetical p...    60   2e-09
AC006644-2|AAF39837.1|  118|Caenorhabditis elegans Hypothetical ...    38   0.007
U42834-3|AAA83583.2|  860|Caenorhabditis elegans Hypothetical pr...    29   4.5  
L14710-6|AAA28079.1|  227|Caenorhabditis elegans Hypothetical pr...    28   7.8  

>Z79754-13|CAB02101.1|  153|Caenorhabditis elegans Hypothetical
           protein F25H2.5 protein.
          Length = 153

 Score = 60.5 bits (140), Expect = 2e-09
 Identities = 29/49 (59%), Positives = 36/49 (73%)
 Frame = -1

Query: 249 ERTFIMVKPDGVQRGLVGTIIERFEKKGFKLVGLKFVWPSEELLQATLQ 103
           ERTFI +KPDGV RGLVG II RFE++G+KLV LK +  S+  L+   Q
Sbjct: 5   ERTFIAIKPDGVHRGLVGKIIARFEERGYKLVALKQMTASKAHLEVHYQ 53



 Score = 50.4 bits (115), Expect = 2e-06
 Identities = 19/29 (65%), Positives = 23/29 (79%)
 Frame = -2

Query: 110 HYSDLASRPFXPGLVKYMSSGPVVXMVWE 24
           HY DL  +PF P L++YMSSGPVV MVW+
Sbjct: 51  HYQDLKDKPFFPSLIEYMSSGPVVAMVWQ 79


>AC006644-2|AAF39837.1|  118|Caenorhabditis elegans Hypothetical
          protein F55A3.6 protein.
          Length = 118

 Score = 38.3 bits (85), Expect = 0.007
 Identities = 15/22 (68%), Positives = 18/22 (81%)
 Frame = -2

Query: 89 RPFXPGLVKYMSSGPVVXMVWE 24
          +PF P L+ YMSSGPVV M+WE
Sbjct: 33 KPFFPLLIDYMSSGPVVAMLWE 54


>U42834-3|AAA83583.2|  860|Caenorhabditis elegans Hypothetical
           protein F28B4.2 protein.
          Length = 860

 Score = 29.1 bits (62), Expect = 4.5
 Identities = 15/52 (28%), Positives = 24/52 (46%)
 Frame = +2

Query: 32  PXGPQVLNSCTLLDQXRKAGMPNRCSVAWRSSSDGHTNFKPTSLKPFFSKRS 187
           P GP  L+  + L +      P+  + +W   S+    F P+SL P+   RS
Sbjct: 607 PPGPVPLSGTSTLPRGSNTNTPSSANASWTGGSE----FTPSSLFPYSHSRS 654


>L14710-6|AAA28079.1|  227|Caenorhabditis elegans Hypothetical
           protein K02D10.4 protein.
          Length = 227

 Score = 28.3 bits (60), Expect = 7.8
 Identities = 12/32 (37%), Positives = 18/32 (56%)
 Frame = -3

Query: 202 CGHHY*TFRKERLQTSRFEIRMAIRRTSPSNT 107
           CGH        R +T +FE R+ ++R+SP  T
Sbjct: 107 CGHPVEVDDHHRRETKKFENRLTLKRSSPCAT 138


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,678,592
Number of Sequences: 27780
Number of extensions: 379124
Number of successful extensions: 830
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 780
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 830
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2255353870
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)