Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP26_F_G12
         (892 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

02_01_0649 + 4831209-4831620,4833356-4833400,4833612-4833684,483...    29   3.8  
11_01_0628 + 5052042-5052863,5053232-5053475,5054136-5054155           29   5.0  
05_07_0132 + 27903236-27903376,27903498-27903659,27903755-279039...    29   6.6  
04_04_1093 + 30825722-30826168,30826457-30826608,30826926-308270...    29   6.6  

>02_01_0649 +
           4831209-4831620,4833356-4833400,4833612-4833684,
           4833877-4833974,4834160-4834230,4834830-4834955
          Length = 274

 Score = 29.5 bits (63), Expect = 3.8
 Identities = 16/60 (26%), Positives = 30/60 (50%), Gaps = 1/60 (1%)
 Frame = -2

Query: 849 LSYTSATHKITAHNHYTRFINLIYYY*FRSENIKKLYFQ*HA-RITSEHEDGAPVACVAI 673
           LS  +  H ITAH  + +F N+I     + +++K   +  H   +     +G+P+ C+ I
Sbjct: 214 LSVAAYDHLITAHVVFFKFPNIILVEGLKLDDVKAGIYMLHCLPLRLVGSEGSPIRCILI 273


>11_01_0628 + 5052042-5052863,5053232-5053475,5054136-5054155
          Length = 361

 Score = 29.1 bits (62), Expect = 5.0
 Identities = 12/42 (28%), Positives = 24/42 (57%)
 Frame = -3

Query: 263 PLIFCEFSYIRAI*KCSHIACTHLFITKLILCRFNIVISHFN 138
           PL  CE S+ +   +  HI   +L+I  +++C+  +++ H N
Sbjct: 90  PLNTCELSFDQI--RRQHIPRVNLWIRHIVMCKVRVLVLHLN 129


>05_07_0132 +
           27903236-27903376,27903498-27903659,27903755-27903903,
           27903999-27904325,27905123-27905323,27906095-27906155,
           27906517-27906718,27906899-27907020,27907143-27907247,
           27907369-27907452
          Length = 517

 Score = 28.7 bits (61), Expect = 6.6
 Identities = 17/44 (38%), Positives = 26/44 (59%), Gaps = 4/44 (9%)
 Frame = -1

Query: 394 ISVNITGLLSLSMF----LILCISDRDSLMLSFSRELCIFPVFL 275
           IS+N+  L  LS      L+LC S  D+L  +FSREL  + +++
Sbjct: 389 ISINLGPLEELSNLCKADLLLCESGGDNLAANFSRELADYIIYI 432


>04_04_1093 + 30825722-30826168,30826457-30826608,30826926-30827048,
            30827240-30827384,30828032-30828093,30828373-30828586,
            30829671-30830585,30830827-30831076,30831164-30831432
          Length = 858

 Score = 28.7 bits (61), Expect = 6.6
 Identities = 24/99 (24%), Positives = 45/99 (45%), Gaps = 7/99 (7%)
 Frame = +3

Query: 138  IKMGNHNIKAAQNKFCDKQMSAGDVGTFSNGSNIRKFT-----KNQGPGRPR-KTGKIQS 299
            +       KA  ++F D ++ A      +  + +++F         G G    +T K+  
Sbjct: 758  LSQAEQEFKAQLDRFADVELDALCSSITALSARMKRFAHPAIGSAAGTGMSTWQTPKVGR 817

Query: 300  SREKDS-IKLSRSDIQRIKNMLNESRPVMLTLMDPNRTN 413
            S   DS + L +S ++++ ++LNE   V LTL +P   N
Sbjct: 818  SHVSDSQMSLLKSSLEKL-SLLNEENNVKLTLREPELKN 855


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,798,173
Number of Sequences: 37544
Number of extensions: 366778
Number of successful extensions: 882
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 848
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 882
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2506954360
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)