Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP26_F_G12
         (892 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z81070-11|CAB03006.3| 1086|Caenorhabditis elegans Hypothetical p...    37   0.017
AF016670-5|AAB66104.1| 1193|Caenorhabditis elegans Hypothetical ...    31   1.1  
Z82288-8|CAB05329.3|  328|Caenorhabditis elegans Hypothetical pr...    30   1.9  
Z81102-5|CAB03205.3|  328|Caenorhabditis elegans Hypothetical pr...    30   1.9  
AL110487-7|CAB54431.1|  581|Caenorhabditis elegans Hypothetical ...    29   4.5  
Z83236-11|CAB05785.1|  489|Caenorhabditis elegans Hypothetical p...    29   5.9  
Z81468-3|CAB03876.1|  489|Caenorhabditis elegans Hypothetical pr...    29   5.9  
Z75549-5|CAA99918.1|  364|Caenorhabditis elegans Hypothetical pr...    29   5.9  
Z68005-1|CAA91991.1| 1199|Caenorhabditis elegans Hypothetical pr...    29   5.9  
U32223-1|AAA74956.1|  489|Caenorhabditis elegans tRNA-guanine tr...    29   5.9  

>Z81070-11|CAB03006.3| 1086|Caenorhabditis elegans Hypothetical
           protein F26E4.10 protein.
          Length = 1086

 Score = 37.1 bits (82), Expect = 0.017
 Identities = 23/95 (24%), Positives = 42/95 (44%), Gaps = 3/95 (3%)
 Frame = +3

Query: 162 KAAQNKFCDKQMSAGDVGTFSNGSNIRKFTK---NQGPGRPRKTGKIQSSREKDSIKLSR 332
           K  + K  D+  +A DV   SN S     T    N+      KTG+++  ++  + +  +
Sbjct: 165 KTPKQKGGDESFTASDVSDDSNDSQDEASTSEPTNRQAPEADKTGEVKDEKQTCNRRNQQ 224

Query: 333 SDIQRIKNMLNESRPVMLTLMDPNRTNLHPQNIYP 437
              +R++N   + R + L     +R   HP  I+P
Sbjct: 225 RKAKRLRNFEEKERQITLLKKGIDRKKTHPNGIHP 259


>AF016670-5|AAB66104.1| 1193|Caenorhabditis elegans Hypothetical
           protein K02F6.4 protein.
          Length = 1193

 Score = 31.1 bits (67), Expect = 1.1
 Identities = 16/53 (30%), Positives = 28/53 (52%)
 Frame = +3

Query: 240 RKFTKNQGPGRPRKTGKIQSSREKDSIKLSRSDIQRIKNMLNESRPVMLTLMD 398
           RKF++N  P  PR++  +  + +K SI    ++   I+  LN+    M  L+D
Sbjct: 10  RKFSQNHSPPPPRRSSALHDAIDKLSIVARVTNAITIQKGLNDKSMKMANLLD 62


>Z82288-8|CAB05329.3|  328|Caenorhabditis elegans Hypothetical
           protein M02B1.1 protein.
          Length = 328

 Score = 30.3 bits (65), Expect = 1.9
 Identities = 19/76 (25%), Positives = 33/76 (43%)
 Frame = -3

Query: 464 ILFRKRSIQWIDVLWMQISSVRIHKC*HYRPTLVKHVFNSLYIRS*QLNAIFFTRALYFS 285
           +L+   SI W+ VLW  +  + +  C  Y   + K+   S+ I    + +IF    +   
Sbjct: 227 LLYGFDSIVWLTVLWYGVGGLSVAVCIKYADNIAKNFATSVAIILSTIGSIFLFDFIPSF 286

Query: 284 CFSWSSWPLIFCEFSY 237
            F   +  +IF  F Y
Sbjct: 287 TFLLGASLVIFSIFLY 302


>Z81102-5|CAB03205.3|  328|Caenorhabditis elegans Hypothetical
           protein M02B1.1 protein.
          Length = 328

 Score = 30.3 bits (65), Expect = 1.9
 Identities = 19/76 (25%), Positives = 33/76 (43%)
 Frame = -3

Query: 464 ILFRKRSIQWIDVLWMQISSVRIHKC*HYRPTLVKHVFNSLYIRS*QLNAIFFTRALYFS 285
           +L+   SI W+ VLW  +  + +  C  Y   + K+   S+ I    + +IF    +   
Sbjct: 227 LLYGFDSIVWLTVLWYGVGGLSVAVCIKYADNIAKNFATSVAIILSTIGSIFLFDFIPSF 286

Query: 284 CFSWSSWPLIFCEFSY 237
            F   +  +IF  F Y
Sbjct: 287 TFLLGASLVIFSIFLY 302


>AL110487-7|CAB54431.1|  581|Caenorhabditis elegans Hypothetical
           protein Y39E4B.10 protein.
          Length = 581

 Score = 29.1 bits (62), Expect = 4.5
 Identities = 26/97 (26%), Positives = 40/97 (41%), Gaps = 1/97 (1%)
 Frame = +1

Query: 475 LQKHHVEESNQTRVLISVLNVTKNLLFTASKISIFRFLFV-KSF*FLTGYKINLTFALRS 651
           L+K       +T+  +  LN+ K   +   KI  F F ++ K       +K NL F L  
Sbjct: 290 LEKIFTFWKKKTQKFLIFLNIFKKNYYHIRKIRFFNFFYISKKILTKKFFKKNLFFFLIF 349

Query: 652 TGKRNSIYSNTGHWRAVFVFRGDPRVSLEIKFLNVFT 762
                SI+SN       F F  +   +  IK  N++T
Sbjct: 350 NNLEKSIFSNFKKSNTFFQFSKNKIFNFLIK--NLYT 384


>Z83236-11|CAB05785.1|  489|Caenorhabditis elegans Hypothetical
           protein C13B4.2 protein.
          Length = 489

 Score = 28.7 bits (61), Expect = 5.9
 Identities = 12/35 (34%), Positives = 20/35 (57%)
 Frame = -1

Query: 133 FQRNVSTITKILHSIKFPREFNTINFV*SNLKDSL 29
           ++ +  T  KIL S++FP + +T +     LKD L
Sbjct: 303 YKESTKTNAKILKSVQFPMQLDTYDLCSQELKDKL 337


>Z81468-3|CAB03876.1|  489|Caenorhabditis elegans Hypothetical
           protein C13B4.2 protein.
          Length = 489

 Score = 28.7 bits (61), Expect = 5.9
 Identities = 12/35 (34%), Positives = 20/35 (57%)
 Frame = -1

Query: 133 FQRNVSTITKILHSIKFPREFNTINFV*SNLKDSL 29
           ++ +  T  KIL S++FP + +T +     LKD L
Sbjct: 303 YKESTKTNAKILKSVQFPMQLDTYDLCSQELKDKL 337


>Z75549-5|CAA99918.1|  364|Caenorhabditis elegans Hypothetical
           protein T19C4.5 protein.
          Length = 364

 Score = 28.7 bits (61), Expect = 5.9
 Identities = 17/44 (38%), Positives = 22/44 (50%)
 Frame = +1

Query: 664 NSIYSNTGHWRAVFVFRGDPRVSLEIKFLNVFTAKSIVIYQINK 795
           N + SN    R + +  G P VS EI FLN     SIV+  + K
Sbjct: 31  NFLISNLSILRRLLIIPGIPFVSHEINFLNRRFVTSIVVVALYK 74


>Z68005-1|CAA91991.1| 1199|Caenorhabditis elegans Hypothetical
           protein F59F3.5 protein.
          Length = 1199

 Score = 28.7 bits (61), Expect = 5.9
 Identities = 30/109 (27%), Positives = 50/109 (45%), Gaps = 9/109 (8%)
 Frame = +3

Query: 156 NIKAAQNKFCDKQMSAGD-VGTFSNGSNIRKFTKNQGPGRPRKTGKIQSSREKDS----I 320
           N  A  ++  +  +  G  V T  NG   +  TK  G     +T  ++S + + S    +
Sbjct: 385 NYTAKWSRLYNSTVEGGQQVETIRNGFFRQITTKTSGRNVFLETLNLKSPKIEMSGIYVL 444

Query: 321 KLSRSDI-QRIKNML---NESRPVMLTLMDPNRTNLHPQNIYPLNGSLS 455
            +S  DI Q++K ++   N+     LT+ DP   N+  Q   PLN +LS
Sbjct: 445 SISNMDIVQQVKWIIEVENDEPNAQLTIRDPLTLNISNQLFLPLNTNLS 493


>U32223-1|AAA74956.1|  489|Caenorhabditis elegans tRNA-guanine
           transglycosylase protein.
          Length = 489

 Score = 28.7 bits (61), Expect = 5.9
 Identities = 12/35 (34%), Positives = 20/35 (57%)
 Frame = -1

Query: 133 FQRNVSTITKILHSIKFPREFNTINFV*SNLKDSL 29
           ++ +  T  KIL S++FP + +T +     LKD L
Sbjct: 303 YKESTKTNAKILKSVQFPMQLDTYDLCSQELKDKL 337


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,738,122
Number of Sequences: 27780
Number of extensions: 390504
Number of successful extensions: 1041
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 1006
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1041
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2255353870
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)