Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP26_F_G10
         (890 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

09_03_0147 + 12763526-12763815,12763938-12764067,12764185-127644...    31   1.2  
01_06_1012 - 33806190-33807875,33807963-33808331                       31   1.2  
06_03_1297 + 29110432-29110542,29110613-29110804,29110893-291109...    30   2.1  
11_01_0632 - 5069425-5069441,5070656-5070809,5070889-5071050,507...    29   5.0  
01_01_0553 - 4067921-4068180,4068437-4068455,4069101-4070225           29   6.6  

>09_03_0147 +
           12763526-12763815,12763938-12764067,12764185-12764435,
           12764546-12764750,12764878-12764918,12765006-12765131,
           12765429-12765502,12765671-12765891,12766251-12766345,
           12766463-12766679,12766781-12766906,12766988-12767086,
           12767171-12767380,12767496-12767606
          Length = 731

 Score = 31.1 bits (67), Expect = 1.2
 Identities = 15/63 (23%), Positives = 25/63 (39%)
 Frame = +2

Query: 305 GQHIVFVASVLWMQGPQMTLQPLENECGILLYNGDIFDESWDSRTSDTQIIMEKLSYDCG 484
           G  + +  ++ WM GP +    L N   + LYNG +    +     D ++ M  L     
Sbjct: 401 GDVVAWPTNLGWMMGPWLVYASLLNGASMALYNGSLNSSGFAKFVQDAKVTMLGLVPSIA 460

Query: 485 SIW 493
             W
Sbjct: 461 RSW 463


>01_06_1012 - 33806190-33807875,33807963-33808331
          Length = 684

 Score = 31.1 bits (67), Expect = 1.2
 Identities = 20/68 (29%), Positives = 33/68 (48%), Gaps = 1/68 (1%)
 Frame = +2

Query: 107 TSVVFLNHLKL*IAVDHLDTVIDSMCGIFLELSCEKCSIVNDIDVLRRLKN-RGPDHLQR 283
           T V    H    + + H+D + +    +F EL  +  SIV++ +  R+  N RG   LQ 
Sbjct: 415 TMVGLKGHWDSWMHIQHIDVLPELKTLVFRELKDKAVSIVDNAESYRKFSNHRGQWALQC 474

Query: 284 KDFISEIG 307
           K +  E+G
Sbjct: 475 KGYYKELG 482


>06_03_1297 +
           29110432-29110542,29110613-29110804,29110893-29110976,
           29111115-29111191,29111410-29111476,29111640-29111697,
           29111823-29111890,29111981-29112043,29112549-29112651,
           29112685-29112845,29112934-29113053,29113300-29113356,
           29113646-29113809,29113896-29114055,29114720-29114803,
           29115074-29115196,29115368-29115498,29115577-29115658,
           29115876-29115963,29116143-29116186,29116264-29116387,
           29116450-29116537,29116649-29116849,29116894-29117104,
           29117383-29117454,29117587-29117790,29117959-29118087
          Length = 1021

 Score = 30.3 bits (65), Expect = 2.1
 Identities = 19/57 (33%), Positives = 35/57 (61%)
 Frame = +1

Query: 631 YTWKATDIVQQCNLSDWLKTLQLKQSLSDEDFTVEANIPWDIDGLEDTVSFIESVAK 801
           Y+   T+ V  C +S+ +KT +  +S   EDF +   +  D+ GL DT+SF++S+++
Sbjct: 418 YSLSETE-VGACPISENIKTKESTESCF-EDFEI---LHGDLQGLPDTMSFLKSLSE 469


>11_01_0632 -
           5069425-5069441,5070656-5070809,5070889-5071050,
           5071270-5072199
          Length = 420

 Score = 29.1 bits (62), Expect = 5.0
 Identities = 19/47 (40%), Positives = 26/47 (55%), Gaps = 7/47 (14%)
 Frame = -3

Query: 468 SFSMIICV-SLVLLSQDSSNISPLYKRMPH------SFSRGCNVICG 349
           SF   ICV SLV L  DS++ +PL + MP         + GC+ +CG
Sbjct: 220 SFRTKICVPSLVSLQLDSNSKTPLLESMPSLAEATVRVTAGCSDVCG 266


>01_01_0553 - 4067921-4068180,4068437-4068455,4069101-4070225
          Length = 467

 Score = 28.7 bits (61), Expect = 6.6
 Identities = 15/45 (33%), Positives = 26/45 (57%), Gaps = 2/45 (4%)
 Frame = -2

Query: 499 FLPNRSTIITKFLHDYLRVAGSAIPRFVKY--ITIIQKDATFIFE 371
           +LP  +  IT+F+    ++AG+ I   +KY  +T  QK+  F+ E
Sbjct: 297 YLPQLTYCITQFIEKETKLAGTVIRGLLKYWPVTNSQKEMMFLGE 341


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,233,040
Number of Sequences: 37544
Number of extensions: 449282
Number of successful extensions: 1062
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1015
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1062
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2506954360
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)