Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP26_F_F23
         (894 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase ...    26   0.53 
DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase ...    26   0.53 
DQ666693-1|ABG29167.1|  250|Apis mellifera MAX dimerization prot...    23   5.0  
DQ325076-1|ABD14090.1|  191|Apis mellifera complementary sex det...    22   8.7  

>DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase
           isoform B protein.
          Length = 931

 Score = 25.8 bits (54), Expect = 0.53
 Identities = 15/46 (32%), Positives = 25/46 (54%)
 Frame = -1

Query: 864 NGSILSTNVPEDILAIRKRPKRLKLHGDQCKRFVVSDCVMIWPSIR 727
           N  +L T+V + ++ +  RP+RL    D+C R ++  C    PS R
Sbjct: 802 NKELLWTSVKKALMIVGIRPERLPSFDDECWR-LMEQCWSGEPSKR 846


>DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase
           isoform A protein.
          Length = 969

 Score = 25.8 bits (54), Expect = 0.53
 Identities = 15/46 (32%), Positives = 25/46 (54%)
 Frame = -1

Query: 864 NGSILSTNVPEDILAIRKRPKRLKLHGDQCKRFVVSDCVMIWPSIR 727
           N  +L T+V + ++ +  RP+RL    D+C R ++  C    PS R
Sbjct: 840 NKELLWTSVKKALMIVGIRPERLPSFDDECWR-LMEQCWSGEPSKR 884


>DQ666693-1|ABG29167.1|  250|Apis mellifera MAX dimerization protein
           protein.
          Length = 250

 Score = 22.6 bits (46), Expect = 5.0
 Identities = 8/21 (38%), Positives = 13/21 (61%)
 Frame = -1

Query: 840 VPEDILAIRKRPKRLKLHGDQ 778
           +P+D+  + KRPK  K  G +
Sbjct: 30  MPDDMRTVTKRPKTKKSQGSR 50


>DQ325076-1|ABD14090.1|  191|Apis mellifera complementary sex
           determiner protein.
          Length = 191

 Score = 21.8 bits (44), Expect = 8.7
 Identities = 10/45 (22%), Positives = 21/45 (46%)
 Frame = -3

Query: 466 KPRVISAGQSMTXXXXXXXXXXXXXSFTRNNTQSNETKKLWFLVS 332
           +P++IS+  + T             ++  NN   N  KKL++ ++
Sbjct: 78  EPKIISSLSNKTIHNNNNYNNNNYNNYNYNNNNYNNYKKLYYNIN 122


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 231,172
Number of Sequences: 438
Number of extensions: 4833
Number of successful extensions: 7
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 146,343
effective HSP length: 58
effective length of database: 120,939
effective search space used: 28904421
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)