Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP26_F_F22
(898 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 34 0.12
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 34 0.12
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 34 0.12
U23172-13|ABH03527.1| 282|Caenorhabditis elegans Hypothetical p... 33 0.28
U23172-12|ABH03526.1| 562|Caenorhabditis elegans Hypothetical p... 33 0.28
Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical pr... 32 0.48
U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA bi... 32 0.48
Z79596-1|CAB01857.1| 830|Caenorhabditis elegans Hypothetical pr... 32 0.64
L29031-1|AAB72228.2| 830|Caenorhabditis elegans dynamin protein. 32 0.64
AF026211-4|AAB71295.1| 416|Caenorhabditis elegans Collagen prot... 31 1.5
U55373-4|ABR92605.1| 210|Caenorhabditis elegans Collagen protei... 30 2.0
Z98877-14|CAD56615.1| 338|Caenorhabditis elegans Hypothetical p... 30 2.6
Z67990-1|CAA91932.1| 316|Caenorhabditis elegans Hypothetical pr... 30 2.6
AF000298-11|AAM97960.1| 518|Caenorhabditis elegans Prion-like-(... 30 2.6
AF000298-10|AAM97961.1| 539|Caenorhabditis elegans Prion-like-(... 30 2.6
AF000298-8|AAC48255.2| 524|Caenorhabditis elegans Prion-like-(q... 30 2.6
AL032627-21|CAD66221.1| 289|Caenorhabditis elegans Hypothetical... 29 3.4
AC006696-4|AAF39985.1| 215|Caenorhabditis elegans Hypothetical ... 29 3.4
Z81479-3|CAB03942.1| 283|Caenorhabditis elegans Hypothetical pr... 29 4.5
Z81479-2|CAB03941.1| 283|Caenorhabditis elegans Hypothetical pr... 29 4.5
Z79596-2|CAC42251.1| 838|Caenorhabditis elegans Hypothetical pr... 29 4.5
Z71177-3|CAA94869.1| 325|Caenorhabditis elegans Hypothetical pr... 29 4.5
Z68338-7|CAA92756.2| 866|Caenorhabditis elegans Hypothetical pr... 29 4.5
Z12018-1|CAD88219.2| 774|Caenorhabditis elegans Hypothetical pr... 29 4.5
Z11126-8|CAD88221.2| 774|Caenorhabditis elegans Hypothetical pr... 29 4.5
U55373-5|AAC25888.1| 289|Caenorhabditis elegans Collagen protei... 29 4.5
AF167982-1|AAD50438.1| 838|Caenorhabditis elegans dynamin protein. 29 4.5
Z66565-6|CAA91483.1| 165|Caenorhabditis elegans Hypothetical pr... 25 5.8
Z82083-5|CAB04973.1| 298|Caenorhabditis elegans Hypothetical pr... 29 6.0
Z81525-6|CAB82206.2| 346|Caenorhabditis elegans Hypothetical pr... 29 6.0
Z68320-1|CAB63328.2| 278|Caenorhabditis elegans Hypothetical pr... 29 6.0
Z68113-3|CAA92150.1| 333|Caenorhabditis elegans Hypothetical pr... 29 6.0
U93842-1|AAB52421.1| 1409|Caenorhabditis elegans regulator of pr... 29 6.0
U49945-3|AAM51509.1| 1408|Caenorhabditis elegans Aboc, expulsion... 29 6.0
U49945-2|AAC47926.1| 1409|Caenorhabditis elegans Aboc, expulsion... 29 6.0
U40799-6|AAA81484.2| 210|Caenorhabditis elegans Ground-like (gr... 29 6.0
U14635-1|AAC46657.2| 448|Caenorhabditis elegans Hypothetical pr... 29 6.0
AF000198-8|AAP68908.1| 435|Caenorhabditis elegans Collagen prot... 29 6.0
Z95559-1|CAB08999.1| 289|Caenorhabditis elegans Hypothetical pr... 28 7.9
Z70756-6|CAA94792.1| 290|Caenorhabditis elegans Hypothetical pr... 28 7.9
Z70756-4|CAA94788.1| 290|Caenorhabditis elegans Hypothetical pr... 28 7.9
Z22964-2|CAA80537.1| 1759|Caenorhabditis elegans a2(IV) collagen... 28 7.9
Z22964-1|CAA80536.1| 1758|Caenorhabditis elegans a2(IV) collagen... 28 7.9
U58736-1|AAB00598.1| 302|Caenorhabditis elegans Dumpy : shorter... 28 7.9
U53342-4|AAA96216.1| 1758|Caenorhabditis elegans Lethal protein ... 28 7.9
U53342-3|AAA96215.1| 1759|Caenorhabditis elegans Lethal protein ... 28 7.9
U22327-1|AAA64312.1| 1795|Caenorhabditis elegans alpha2(IV) coll... 28 7.9
AL032652-4|CAB63398.1| 486|Caenorhabditis elegans Hypothetical ... 28 7.9
AF045646-2|AAK29827.1| 371|Caenorhabditis elegans Collagen prot... 28 7.9
AF003151-19|AAK18922.1| 988|Caenorhabditis elegans Hypothetical... 28 7.9
AC025721-11|AAK29900.1| 78|Caenorhabditis elegans Hypothetical... 28 7.9
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 34.3 bits (75), Expect = 0.12
Identities = 15/34 (44%), Positives = 15/34 (44%)
Frame = -1
Query: 592 GXPPFXGXXXXPPXGGXKXXPPPXXPGPGVFXGG 491
G PP G PP PPP P PG F GG
Sbjct: 750 GLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGG 783
Score = 29.1 bits (62), Expect = 4.5
Identities = 12/20 (60%), Positives = 13/20 (65%)
Frame = -1
Query: 559 PPXGGXKXXPPPXXPGPGVF 500
PP GG K PPP P PG+F
Sbjct: 775 PPPGGFKGGPPPPPP-PGMF 793
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 34.3 bits (75), Expect = 0.12
Identities = 15/34 (44%), Positives = 15/34 (44%)
Frame = -1
Query: 592 GXPPFXGXXXXPPXGGXKXXPPPXXPGPGVFXGG 491
G PP G PP PPP P PG F GG
Sbjct: 750 GLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGG 783
Score = 29.1 bits (62), Expect = 4.5
Identities = 12/20 (60%), Positives = 13/20 (65%)
Frame = -1
Query: 559 PPXGGXKXXPPPXXPGPGVF 500
PP GG K PPP P PG+F
Sbjct: 775 PPPGGFKGGPPPPPP-PGMF 793
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 34.3 bits (75), Expect = 0.12
Identities = 15/34 (44%), Positives = 15/34 (44%)
Frame = -1
Query: 592 GXPPFXGXXXXPPXGGXKXXPPPXXPGPGVFXGG 491
G PP G PP PPP P PG F GG
Sbjct: 333 GLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGG 366
Score = 29.1 bits (62), Expect = 4.5
Identities = 12/20 (60%), Positives = 13/20 (65%)
Frame = -1
Query: 559 PPXGGXKXXPPPXXPGPGVF 500
PP GG K PPP P PG+F
Sbjct: 358 PPPGGFKGGPPPPPP-PGMF 376
>U23172-13|ABH03527.1| 282|Caenorhabditis elegans Hypothetical
protein F25B5.7c protein.
Length = 282
Score = 33.1 bits (72), Expect = 0.28
Identities = 16/38 (42%), Positives = 16/38 (42%)
Frame = -1
Query: 592 GXPPFXGXXXXPPXGGXKXXPPPXXPGPGVFXGGXGXG 479
G PP G PP G PPP GPG G G G
Sbjct: 181 GGPPGHGGQGGPPGHGGMGGPPPGQGGPGGPGGPGGPG 218
>U23172-12|ABH03526.1| 562|Caenorhabditis elegans Hypothetical
protein F25B5.7a protein.
Length = 562
Score = 33.1 bits (72), Expect = 0.28
Identities = 16/38 (42%), Positives = 16/38 (42%)
Frame = -1
Query: 592 GXPPFXGXXXXPPXGGXKXXPPPXXPGPGVFXGGXGXG 479
G PP G PP G PPP GPG G G G
Sbjct: 461 GGPPGHGGQGGPPGHGGMGGPPPGQGGPGGPGGPGGPG 498
>Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical
protein C08B11.5 protein.
Length = 388
Score = 32.3 bits (70), Expect = 0.48
Identities = 17/51 (33%), Positives = 19/51 (37%)
Frame = +2
Query: 443 PPPXXXGXXFLXPXPXPPXKNPGPRXXGGGXGFXPPXXGXXXXPXKXGXXP 595
PPP + P P PP + PGP G G PP P G P
Sbjct: 287 PPPPPSSGMWPPPPPPPPGRTPGP---PGMPGMPPPPPPSRFGPPGMGGMP 334
Score = 29.9 bits (64), Expect = 2.6
Identities = 15/54 (27%), Positives = 16/54 (29%)
Frame = +3
Query: 573 PXXGGXPXKKXFXKXPQXGPXPXXXPXXXFFXXXPPPPKXXKKXPPXXXGGXPP 734
P P P P P P + PPPP PP G PP
Sbjct: 266 PPPSVTPMPPPMPPTPGMTPRPPPPPSSGMWPPPPPPPPGRTPGPPGMPGMPPP 319
Score = 29.1 bits (62), Expect = 4.5
Identities = 15/38 (39%), Positives = 16/38 (42%)
Frame = +2
Query: 782 PPXFXPPXXKKXXPPLSPXGXXGPPPXXPXWFSPPXXG 895
PP PP + PP P PPP P F PP G
Sbjct: 297 PPPPPPPPGRTPGPPGMPGM---PPPPPPSRFGPPGMG 331
Score = 28.7 bits (61), Expect = 6.0
Identities = 13/39 (33%), Positives = 14/39 (35%)
Frame = +3
Query: 618 PQXGPXPXXXPXXXFFXXXPPPPKXXKKXPPXXXGGXPP 734
P P P P PPPP + PP G PP
Sbjct: 298 PPPPPPPGRTPGPPGMPGMPPPPPPSRFGPPGMGGMPPP 336
>U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA
binding protein protein.
Length = 398
Score = 32.3 bits (70), Expect = 0.48
Identities = 17/51 (33%), Positives = 19/51 (37%)
Frame = +2
Query: 443 PPPXXXGXXFLXPXPXPPXKNPGPRXXGGGXGFXPPXXGXXXXPXKXGXXP 595
PPP + P P PP + PGP G G PP P G P
Sbjct: 297 PPPPPSSGMWPPPPPPPPGRTPGP---PGMPGMPPPPPPSRFGPPGMGGMP 344
Score = 29.9 bits (64), Expect = 2.6
Identities = 15/54 (27%), Positives = 16/54 (29%)
Frame = +3
Query: 573 PXXGGXPXKKXFXKXPQXGPXPXXXPXXXFFXXXPPPPKXXKKXPPXXXGGXPP 734
P P P P P P + PPPP PP G PP
Sbjct: 276 PPPSVTPMPPPMPPTPGMTPRPPPPPSSGMWPPPPPPPPGRTPGPPGMPGMPPP 329
Score = 29.1 bits (62), Expect = 4.5
Identities = 15/38 (39%), Positives = 16/38 (42%)
Frame = +2
Query: 782 PPXFXPPXXKKXXPPLSPXGXXGPPPXXPXWFSPPXXG 895
PP PP + PP P PPP P F PP G
Sbjct: 307 PPPPPPPPGRTPGPPGMPGM---PPPPPPSRFGPPGMG 341
Score = 28.7 bits (61), Expect = 6.0
Identities = 13/39 (33%), Positives = 14/39 (35%)
Frame = +3
Query: 618 PQXGPXPXXXPXXXFFXXXPPPPKXXKKXPPXXXGGXPP 734
P P P P PPPP + PP G PP
Sbjct: 308 PPPPPPPGRTPGPPGMPGMPPPPPPSRFGPPGMGGMPPP 346
>Z79596-1|CAB01857.1| 830|Caenorhabditis elegans Hypothetical
protein C02C6.1a protein.
Length = 830
Score = 31.9 bits (69), Expect = 0.64
Identities = 20/51 (39%), Positives = 20/51 (39%), Gaps = 3/51 (5%)
Frame = -3
Query: 584 PXXGXXXXXPXXGXXXXXPPPKXGAR---GFXGGXGGXGPKXXPXXPGGGG 441
P G P G PPP G R G GG GG P P PG GG
Sbjct: 773 PPGGRQAPMPPRGGPGAPPPP--GMRPPPGAPGGGGGMYPPLIPTRPGPGG 821
Score = 29.1 bits (62), Expect = 4.5
Identities = 11/22 (50%), Positives = 11/22 (50%)
Frame = +2
Query: 485 PXPPXKNPGPRXXGGGXGFXPP 550
P PP P P GGG G PP
Sbjct: 790 PPPPGMRPPPGAPGGGGGMYPP 811
>L29031-1|AAB72228.2| 830|Caenorhabditis elegans dynamin protein.
Length = 830
Score = 31.9 bits (69), Expect = 0.64
Identities = 20/51 (39%), Positives = 20/51 (39%), Gaps = 3/51 (5%)
Frame = -3
Query: 584 PXXGXXXXXPXXGXXXXXPPPKXGAR---GFXGGXGGXGPKXXPXXPGGGG 441
P G P G PPP G R G GG GG P P PG GG
Sbjct: 773 PPGGRQAPMPPRGGPGAPPPP--GMRPPPGAPGGGGGMYPPLIPTRPGPGG 821
Score = 29.1 bits (62), Expect = 4.5
Identities = 11/22 (50%), Positives = 11/22 (50%)
Frame = +2
Query: 485 PXPPXKNPGPRXXGGGXGFXPP 550
P PP P P GGG G PP
Sbjct: 790 PPPPGMRPPPGAPGGGGGMYPP 811
>AF026211-4|AAB71295.1| 416|Caenorhabditis elegans Collagen protein
40 protein.
Length = 416
Score = 30.7 bits (66), Expect = 1.5
Identities = 15/39 (38%), Positives = 15/39 (38%)
Frame = -3
Query: 557 PXXGXXXXXPPPKXGARGFXGGXGGXGPKXXPXXPGGGG 441
P G PP GA G GG GP P PG G
Sbjct: 182 PAGGPGPAGPPGPAGADGNTPSGGGEGPAGPPGPPGPAG 220
>U55373-4|ABR92605.1| 210|Caenorhabditis elegans Collagen protein
140, isoform b protein.
Length = 210
Score = 30.3 bits (65), Expect = 2.0
Identities = 15/42 (35%), Positives = 17/42 (40%)
Frame = -3
Query: 530 PPPKXGARGFXGGXGGXGPKXXPXXPGGGGXFXXXKXXPPPP 405
PP + G G G G GP P PGG G + P P
Sbjct: 155 PPGEVGPAGPSGDNGRKGPPGPPGGPGGPGEGGDGEDAAPGP 196
>Z98877-14|CAD56615.1| 338|Caenorhabditis elegans Hypothetical
protein Y69H2.14 protein.
Length = 338
Score = 29.9 bits (64), Expect = 2.6
Identities = 18/62 (29%), Positives = 18/62 (29%)
Frame = -1
Query: 592 GXPPFXGXXXXPPXGGXKXXPPPXXPGPGVFXGGXGXGXQKXXPXXXGGGGFFXXXKXXP 413
G P G P GG P PG G G P GG G P
Sbjct: 271 GPPGLAGPDGQPGHGGGGQPGPQGPPGDDGHPGEDGGAGGPGQPGQDGGSGGSGACDHCP 330
Query: 412 PP 407
PP
Sbjct: 331 PP 332
>Z67990-1|CAA91932.1| 316|Caenorhabditis elegans Hypothetical
protein F02D10.1 protein.
Length = 316
Score = 29.9 bits (64), Expect = 2.6
Identities = 15/41 (36%), Positives = 15/41 (36%)
Frame = -3
Query: 530 PPPKXGARGFXGGXGGXGPKXXPXXPGGGGXFXXXKXXPPP 408
PP G G G GG GP P P G G PP
Sbjct: 169 PPGPPGPDGTPGEPGGPGPAGSPAGPSGPGPAGPPGPAGPP 209
>AF000298-11|AAM97960.1| 518|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform b protein.
Length = 518
Score = 29.9 bits (64), Expect = 2.6
Identities = 18/63 (28%), Positives = 19/63 (30%)
Frame = +3
Query: 546 PPXGGXXXXPXXGGXPXKKXFXKXPQXGPXPXXXPXXXFFXXXPPPPKXXKKXPPXXXGG 725
PP G P GG P P P P PPP+ PP G
Sbjct: 274 PPPTGSPPPPPAGGSPPPPRAGSPPPPPPPRGSPPTGSL-----PPPQAGGSPPPAGTGS 328
Query: 726 XPP 734
PP
Sbjct: 329 PPP 331
Score = 29.1 bits (62), Expect = 4.5
Identities = 17/59 (28%), Positives = 18/59 (30%)
Frame = +3
Query: 558 GXXXXPXXGGXPXKKXFXKXPQXGPXPXXXPXXXFFXXXPPPPKXXKKXPPXXXGGXPP 734
G P G P P P P P PPPP+ PP G PP
Sbjct: 253 GSPPPPPAAGSPPPPRTGSPP---PPPTGSPPPPPAGGSPPPPRAGSPPPPPPPRGSPP 308
Score = 29.1 bits (62), Expect = 4.5
Identities = 20/67 (29%), Positives = 22/67 (32%)
Frame = -1
Query: 586 PPFXGXXXXPPXGGXKXXPPPXXPGPGVFXGGXGXGXQKXXPXXXGGGGFFXXXKXXPPP 407
PP G PP GG PPP P G P GG PPP
Sbjct: 274 PPPTGSPPPPPAGG--SPPPPRAGSPPPPPPPRGSPPTGSLPPPQAGGSPPPAGTGSPPP 331
Query: 406 PXXGKKK 386
P K++
Sbjct: 332 PPRQKRQ 338
>AF000298-10|AAM97961.1| 539|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform c protein.
Length = 539
Score = 29.9 bits (64), Expect = 2.6
Identities = 18/63 (28%), Positives = 19/63 (30%)
Frame = +3
Query: 546 PPXGGXXXXPXXGGXPXKKXFXKXPQXGPXPXXXPXXXFFXXXPPPPKXXKKXPPXXXGG 725
PP G P GG P P P P PPP+ PP G
Sbjct: 295 PPPTGSPPPPPAGGSPPPPRAGSPPPPPPPRGSPPTGSL-----PPPQAGGSPPPAGTGS 349
Query: 726 XPP 734
PP
Sbjct: 350 PPP 352
Score = 29.1 bits (62), Expect = 4.5
Identities = 17/59 (28%), Positives = 18/59 (30%)
Frame = +3
Query: 558 GXXXXPXXGGXPXKKXFXKXPQXGPXPXXXPXXXFFXXXPPPPKXXKKXPPXXXGGXPP 734
G P G P P P P P PPPP+ PP G PP
Sbjct: 274 GSPPPPPAAGSPPPPRTGSPP---PPPTGSPPPPPAGGSPPPPRAGSPPPPPPPRGSPP 329
Score = 29.1 bits (62), Expect = 4.5
Identities = 20/67 (29%), Positives = 22/67 (32%)
Frame = -1
Query: 586 PPFXGXXXXPPXGGXKXXPPPXXPGPGVFXGGXGXGXQKXXPXXXGGGGFFXXXKXXPPP 407
PP G PP GG PPP P G P GG PPP
Sbjct: 295 PPPTGSPPPPPAGG--SPPPPRAGSPPPPPPPRGSPPTGSLPPPQAGGSPPPAGTGSPPP 352
Query: 406 PXXGKKK 386
P K++
Sbjct: 353 PPRQKRQ 359
>AF000298-8|AAC48255.2| 524|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform a protein.
Length = 524
Score = 29.9 bits (64), Expect = 2.6
Identities = 18/63 (28%), Positives = 19/63 (30%)
Frame = +3
Query: 546 PPXGGXXXXPXXGGXPXKKXFXKXPQXGPXPXXXPXXXFFXXXPPPPKXXKKXPPXXXGG 725
PP G P GG P P P P PPP+ PP G
Sbjct: 280 PPPTGSPPPPPAGGSPPPPRAGSPPPPPPPRGSPPTGSL-----PPPQAGGSPPPAGTGS 334
Query: 726 XPP 734
PP
Sbjct: 335 PPP 337
Score = 29.1 bits (62), Expect = 4.5
Identities = 17/59 (28%), Positives = 18/59 (30%)
Frame = +3
Query: 558 GXXXXPXXGGXPXKKXFXKXPQXGPXPXXXPXXXFFXXXPPPPKXXKKXPPXXXGGXPP 734
G P G P P P P P PPPP+ PP G PP
Sbjct: 259 GSPPPPPAAGSPPPPRTGSPP---PPPTGSPPPPPAGGSPPPPRAGSPPPPPPPRGSPP 314
Score = 29.1 bits (62), Expect = 4.5
Identities = 20/67 (29%), Positives = 22/67 (32%)
Frame = -1
Query: 586 PPFXGXXXXPPXGGXKXXPPPXXPGPGVFXGGXGXGXQKXXPXXXGGGGFFXXXKXXPPP 407
PP G PP GG PPP P G P GG PPP
Sbjct: 280 PPPTGSPPPPPAGG--SPPPPRAGSPPPPPPPRGSPPTGSLPPPQAGGSPPPAGTGSPPP 337
Query: 406 PXXGKKK 386
P K++
Sbjct: 338 PPRQKRQ 344
>AL032627-21|CAD66221.1| 289|Caenorhabditis elegans Hypothetical
protein Y41C4A.19 protein.
Length = 289
Score = 29.5 bits (63), Expect = 3.4
Identities = 12/29 (41%), Positives = 12/29 (41%)
Frame = -3
Query: 527 PPKXGARGFXGGXGGXGPKXXPXXPGGGG 441
P G GF G G GP P PG G
Sbjct: 221 PGAPGGPGFPGAPGSKGPSGAPGQPGANG 249
>AC006696-4|AAF39985.1| 215|Caenorhabditis elegans Hypothetical
protein W08E12.6 protein.
Length = 215
Score = 29.5 bits (63), Expect = 3.4
Identities = 14/40 (35%), Positives = 14/40 (35%)
Frame = -1
Query: 634 FGPFWGXFXKXFFXGXPPFXGXXXXPPXGGXKXXPPPXXP 515
FGP G PP G PP G PPP P
Sbjct: 128 FGPACAPSAPIIVNGPPPCFGPACPPPCFGPACAPPPPAP 167
Score = 28.7 bits (61), Expect = 6.0
Identities = 14/38 (36%), Positives = 15/38 (39%)
Frame = +2
Query: 785 PXFXPPXXKKXXPPLSPXGXXGPPPXXPXWFSPPXXGP 898
P PP PL+P GPPP PP GP
Sbjct: 65 PACPPPCFGPACVPLAPIIVNGPPPCFGPACPPPCFGP 102
>Z81479-3|CAB03942.1| 283|Caenorhabditis elegans Hypothetical
protein C34F6.3 protein.
Length = 283
Score = 29.1 bits (62), Expect = 4.5
Identities = 16/38 (42%), Positives = 16/38 (42%), Gaps = 4/38 (10%)
Frame = -3
Query: 506 GFXGGXGGXGPKXXPXXPGG----GGXFXXXKXXPPPP 405
G G GG GPK P PGG GG PP P
Sbjct: 142 GPPGAVGGPGPKGPPGPPGGPGELGGPGRGGNRGPPGP 179
>Z81479-2|CAB03941.1| 283|Caenorhabditis elegans Hypothetical
protein C34F6.2 protein.
Length = 283
Score = 29.1 bits (62), Expect = 4.5
Identities = 16/38 (42%), Positives = 16/38 (42%), Gaps = 4/38 (10%)
Frame = -3
Query: 506 GFXGGXGGXGPKXXPXXPGG----GGXFXXXKXXPPPP 405
G G GG GPK P PGG GG PP P
Sbjct: 142 GPPGAVGGPGPKGPPGPPGGPGELGGPGRGGNRGPPGP 179
>Z79596-2|CAC42251.1| 838|Caenorhabditis elegans Hypothetical
protein C02C6.1b protein.
Length = 838
Score = 29.1 bits (62), Expect = 4.5
Identities = 15/35 (42%), Positives = 15/35 (42%), Gaps = 1/35 (2%)
Frame = -1
Query: 586 PPFXGXXXXPPXGGXKXXPPP-XXPGPGVFXGGXG 485
PP PP GG PPP P PG GG G
Sbjct: 773 PPGGRQAPMPPRGGPGAPPPPGMRPPPGAPGGGGG 807
Score = 29.1 bits (62), Expect = 4.5
Identities = 11/22 (50%), Positives = 11/22 (50%)
Frame = +2
Query: 485 PXPPXKNPGPRXXGGGXGFXPP 550
P PP P P GGG G PP
Sbjct: 790 PPPPGMRPPPGAPGGGGGMYPP 811
>Z71177-3|CAA94869.1| 325|Caenorhabditis elegans Hypothetical
protein AC3.6 protein.
Length = 325
Score = 29.1 bits (62), Expect = 4.5
Identities = 14/39 (35%), Positives = 15/39 (38%)
Frame = -3
Query: 557 PXXGXXXXXPPPKXGARGFXGGXGGXGPKXXPXXPGGGG 441
P G P G +G G GG G P PGG G
Sbjct: 237 PDGGYPMSGEPGSSGPQGKAGQPGGPGVDGHPGRPGGSG 275
>Z68338-7|CAA92756.2| 866|Caenorhabditis elegans Hypothetical
protein T24B8.4 protein.
Length = 866
Score = 29.1 bits (62), Expect = 4.5
Identities = 16/44 (36%), Positives = 17/44 (38%)
Frame = +2
Query: 443 PPPXXXGXXFLXPXPXPPXKNPGPRXXGGGXGFXPPXXGXXXXP 574
PPP G F+ P P P P P GG PP G P
Sbjct: 66 PPPVPNG--FIPPPPGPGGIPPPPPMFAGGIPPPPPMMGGIPPP 107
>Z12018-1|CAD88219.2| 774|Caenorhabditis elegans Hypothetical
protein ZK643.8 protein.
Length = 774
Score = 29.1 bits (62), Expect = 4.5
Identities = 15/39 (38%), Positives = 16/39 (41%), Gaps = 2/39 (5%)
Frame = -3
Query: 515 GARGFXGGXGGXGPKXX--PXXPGGGGXFXXXKXXPPPP 405
G G+ GG GG G GGGG PPPP
Sbjct: 268 GGGGYAGGGGGGGGSSGGYAGSSGGGGYSAPAAAPPPPP 306
Score = 28.3 bits (60), Expect = 7.9
Identities = 12/31 (38%), Positives = 13/31 (41%)
Frame = -1
Query: 496 GGXGXGXQKXXPXXXGGGGFFXXXKXXPPPP 404
GG G G GGGG+ PPPP
Sbjct: 276 GGGGGGSSGGYAGSSGGGGYSAPAAAPPPPP 306
>Z11126-8|CAD88221.2| 774|Caenorhabditis elegans Hypothetical
protein ZK643.8 protein.
Length = 774
Score = 29.1 bits (62), Expect = 4.5
Identities = 15/39 (38%), Positives = 16/39 (41%), Gaps = 2/39 (5%)
Frame = -3
Query: 515 GARGFXGGXGGXGPKXX--PXXPGGGGXFXXXKXXPPPP 405
G G+ GG GG G GGGG PPPP
Sbjct: 268 GGGGYAGGGGGGGGSSGGYAGSSGGGGYSAPAAAPPPPP 306
Score = 28.3 bits (60), Expect = 7.9
Identities = 12/31 (38%), Positives = 13/31 (41%)
Frame = -1
Query: 496 GGXGXGXQKXXPXXXGGGGFFXXXKXXPPPP 404
GG G G GGGG+ PPPP
Sbjct: 276 GGGGGGSSGGYAGSSGGGGYSAPAAAPPPPP 306
>U55373-5|AAC25888.1| 289|Caenorhabditis elegans Collagen protein
140, isoform a protein.
Length = 289
Score = 29.1 bits (62), Expect = 4.5
Identities = 13/30 (43%), Positives = 14/30 (46%)
Frame = -3
Query: 530 PPPKXGARGFXGGXGGXGPKXXPXXPGGGG 441
PP + G G G G GP P PGG G
Sbjct: 155 PPGEVGPAGPSGDNGRKGPPGPPGGPGGPG 184
>AF167982-1|AAD50438.1| 838|Caenorhabditis elegans dynamin protein.
Length = 838
Score = 29.1 bits (62), Expect = 4.5
Identities = 15/35 (42%), Positives = 15/35 (42%), Gaps = 1/35 (2%)
Frame = -1
Query: 586 PPFXGXXXXPPXGGXKXXPPP-XXPGPGVFXGGXG 485
PP PP GG PPP P PG GG G
Sbjct: 773 PPGGRQAPMPPRGGPGAPPPPGMRPPPGAPGGGGG 807
Score = 29.1 bits (62), Expect = 4.5
Identities = 11/22 (50%), Positives = 11/22 (50%)
Frame = +2
Query: 485 PXPPXKNPGPRXXGGGXGFXPP 550
P PP P P GGG G PP
Sbjct: 790 PPPPGMRPPPGAPGGGGGMYPP 811
>Z66565-6|CAA91483.1| 165|Caenorhabditis elegans Hypothetical
protein T04F8.8 protein.
Length = 165
Score = 25.0 bits (52), Expect(2) = 5.8
Identities = 12/35 (34%), Positives = 14/35 (40%)
Frame = -1
Query: 649 GXFXGFGPFWGXFXKXFFXGXPPFXGXXXXPPXGG 545
G F +G G + G PPF G P GG
Sbjct: 50 GGFNNYGNGGGFGGNNYNNGPPPFDGGYNRPYGGG 84
Score = 22.2 bits (45), Expect(2) = 5.8
Identities = 8/16 (50%), Positives = 9/16 (56%)
Frame = -1
Query: 451 GGGGFFXXXKXXPPPP 404
GGGG+ PPPP
Sbjct: 85 GGGGYGRPQGYVPPPP 100
>Z82083-5|CAB04973.1| 298|Caenorhabditis elegans Hypothetical
protein ZK1010.7 protein.
Length = 298
Score = 28.7 bits (61), Expect = 6.0
Identities = 12/29 (41%), Positives = 14/29 (48%)
Frame = -3
Query: 527 PPKXGARGFXGGXGGXGPKXXPXXPGGGG 441
P + G G G GG GP+ P PG G
Sbjct: 164 PGQSGHPGRNGNDGGVGPQGPPGPPGNNG 192
>Z81525-6|CAB82206.2| 346|Caenorhabditis elegans Hypothetical
protein F33A8.9 protein.
Length = 346
Score = 28.7 bits (61), Expect = 6.0
Identities = 12/27 (44%), Positives = 13/27 (48%)
Frame = -3
Query: 530 PPPKXGARGFXGGXGGXGPKXXPXXPG 450
PP G G G GG GP+ P PG
Sbjct: 236 PPGPPGPPGPPGNPGGIGPRGPPGDPG 262
>Z68320-1|CAB63328.2| 278|Caenorhabditis elegans Hypothetical
protein W07A12.5 protein.
Length = 278
Score = 28.7 bits (61), Expect = 6.0
Identities = 13/29 (44%), Positives = 13/29 (44%)
Frame = -3
Query: 527 PPKXGARGFXGGXGGXGPKXXPXXPGGGG 441
P K G G G G GP P PGG G
Sbjct: 218 PGKPGPSGPDGKIGATGPGGDPGKPGGNG 246
>Z68113-3|CAA92150.1| 333|Caenorhabditis elegans Hypothetical
protein E03G2.4 protein.
Length = 333
Score = 28.7 bits (61), Expect = 6.0
Identities = 19/63 (30%), Positives = 19/63 (30%), Gaps = 1/63 (1%)
Frame = -1
Query: 592 GXPPFXGXXXXPPXGGXKXXP-PPXXPGPGVFXGGXGXGXQKXXPXXXGGGGFFXXXKXX 416
G P G P G P G GG G QK P G GF
Sbjct: 265 GLPGMPGLQGKPGNDGYPGRDGSPGDQGDDGIPGGPGKPGQKGYPGPDGSAGFPGGCDHC 324
Query: 415 PPP 407
PPP
Sbjct: 325 PPP 327
>U93842-1|AAB52421.1| 1409|Caenorhabditis elegans regulator of
presynaptic activity protein.
Length = 1409
Score = 28.7 bits (61), Expect = 6.0
Identities = 14/34 (41%), Positives = 15/34 (44%), Gaps = 5/34 (14%)
Frame = +2
Query: 782 PPXFXPPXXKKXXPPLS-----PXGXXGPPPXXP 868
PP PP K+ PPL P G PPP P
Sbjct: 969 PPREAPPIPKRNPPPLGAPPKVPEGARAPPPLPP 1002
>U49945-3|AAM51509.1| 1408|Caenorhabditis elegans Aboc, expulsion
defective protein3, isoform b protein.
Length = 1408
Score = 28.7 bits (61), Expect = 6.0
Identities = 14/34 (41%), Positives = 15/34 (44%), Gaps = 5/34 (14%)
Frame = +2
Query: 782 PPXFXPPXXKKXXPPLS-----PXGXXGPPPXXP 868
PP PP K+ PPL P G PPP P
Sbjct: 969 PPREAPPIPKRNPPPLGAPPKVPEGARAPPPLPP 1002
>U49945-2|AAC47926.1| 1409|Caenorhabditis elegans Aboc, expulsion
defective protein3, isoform a protein.
Length = 1409
Score = 28.7 bits (61), Expect = 6.0
Identities = 14/34 (41%), Positives = 15/34 (44%), Gaps = 5/34 (14%)
Frame = +2
Query: 782 PPXFXPPXXKKXXPPLS-----PXGXXGPPPXXP 868
PP PP K+ PPL P G PPP P
Sbjct: 969 PPREAPPIPKRNPPPLGAPPKVPEGARAPPPLPP 1002
>U40799-6|AAA81484.2| 210|Caenorhabditis elegans Ground-like (grd
related) protein 4 protein.
Length = 210
Score = 28.7 bits (61), Expect = 6.0
Identities = 13/35 (37%), Positives = 14/35 (40%)
Frame = +2
Query: 782 PPXFXPPXXKKXXPPLSPXGXXGPPPXXPXWFSPP 886
PP PP PP+ P PPP P PP
Sbjct: 35 PPMCAPPPLPCPPPPICPPQFCPPPPMCPPPPPPP 69
>U14635-1|AAC46657.2| 448|Caenorhabditis elegans Hypothetical
protein C27H5.3 protein.
Length = 448
Score = 28.7 bits (61), Expect = 6.0
Identities = 16/39 (41%), Positives = 17/39 (43%)
Frame = -2
Query: 897 GPXXGGENXXGXWGGGPXXPXGERGGXXFLXXGGXKXGG 781
G GG G +GGG P G RGG GG GG
Sbjct: 292 GGERGGRGGRGGFGGGRGGPMGGRGGFGG-DRGGYGGGG 329
>AF000198-8|AAP68908.1| 435|Caenorhabditis elegans Collagen protein
51 protein.
Length = 435
Score = 28.7 bits (61), Expect = 6.0
Identities = 20/66 (30%), Positives = 20/66 (30%)
Frame = -1
Query: 592 GXPPFXGXXXXPPXGGXKXXPPPXXPGPGVFXGGXGXGXQKXXPXXXGGGGFFXXXKXXP 413
G P G GG PP PGP G G Q P GG G P
Sbjct: 255 GPPGPPGPPGQDGSGGAAQPGPPGPPGPPGNDGQPGGPGQPGGPGQDGGPGTDAAYCPCP 314
Query: 412 PPPXXG 395
P G
Sbjct: 315 PRTPAG 320
>Z95559-1|CAB08999.1| 289|Caenorhabditis elegans Hypothetical
protein Y41E3.2 protein.
Length = 289
Score = 28.3 bits (60), Expect = 7.9
Identities = 12/30 (40%), Positives = 13/30 (43%)
Frame = -3
Query: 530 PPPKXGARGFXGGXGGXGPKXXPXXPGGGG 441
PP G+ G G G G K P PG G
Sbjct: 219 PPGPPGSNGIDGAPGAPGAKGEPGTPGEPG 248
>Z70756-6|CAA94792.1| 290|Caenorhabditis elegans Hypothetical
protein T06E4.6 protein.
Length = 290
Score = 28.3 bits (60), Expect = 7.9
Identities = 13/30 (43%), Positives = 13/30 (43%)
Frame = -3
Query: 530 PPPKXGARGFXGGXGGXGPKXXPXXPGGGG 441
P G G GG G GP P PGG G
Sbjct: 212 PAGGPGQPGQSGGAGAPGPAGAPGAPGGPG 241
>Z70756-4|CAA94788.1| 290|Caenorhabditis elegans Hypothetical
protein T06E4.4 protein.
Length = 290
Score = 28.3 bits (60), Expect = 7.9
Identities = 13/30 (43%), Positives = 13/30 (43%)
Frame = -3
Query: 530 PPPKXGARGFXGGXGGXGPKXXPXXPGGGG 441
P G G GG G GP P PGG G
Sbjct: 212 PAGGPGQPGQSGGAGAPGPAGAPGAPGGPG 241
>Z22964-2|CAA80537.1| 1759|Caenorhabditis elegans a2(IV) collagen
protein.
Length = 1759
Score = 28.3 bits (60), Expect = 7.9
Identities = 16/41 (39%), Positives = 17/41 (41%), Gaps = 2/41 (4%)
Frame = -3
Query: 527 PPKXGARGFXGGXGGXGPKXX--PXXPGGGGXFXXXKXXPP 411
P G +G G G GPK P P GGG F PP
Sbjct: 331 PGLPGQKGEAGYPGRDGPKGNSGPPGPPGGGTFNDGAPGPP 371
>Z22964-1|CAA80536.1| 1758|Caenorhabditis elegans a2(IV) collagen
protein.
Length = 1758
Score = 28.3 bits (60), Expect = 7.9
Identities = 16/41 (39%), Positives = 17/41 (41%), Gaps = 2/41 (4%)
Frame = -3
Query: 527 PPKXGARGFXGGXGGXGPKXX--PXXPGGGGXFXXXKXXPP 411
P G +G G G GPK P P GGG F PP
Sbjct: 330 PGLPGQKGEAGYPGRDGPKGNSGPPGPPGGGTFNDGAPGPP 370
>U58736-1|AAB00598.1| 302|Caenorhabditis elegans Dumpy : shorter
than wild-typeprotein 3 protein.
Length = 302
Score = 28.3 bits (60), Expect = 7.9
Identities = 11/26 (42%), Positives = 14/26 (53%)
Frame = -3
Query: 527 PPKXGARGFXGGXGGXGPKXXPXXPG 450
P + G+ G G GG GP+ P PG
Sbjct: 260 PGEKGSDGLPGPHGGTGPRGPPGQPG 285
>U53342-4|AAA96216.1| 1758|Caenorhabditis elegans Lethal protein 2,
isoform a protein.
Length = 1758
Score = 28.3 bits (60), Expect = 7.9
Identities = 16/41 (39%), Positives = 17/41 (41%), Gaps = 2/41 (4%)
Frame = -3
Query: 527 PPKXGARGFXGGXGGXGPKXX--PXXPGGGGXFXXXKXXPP 411
P G +G G G GPK P P GGG F PP
Sbjct: 330 PGLPGQKGEAGYPGRDGPKGNSGPPGPPGGGTFNDGAPGPP 370
>U53342-3|AAA96215.1| 1759|Caenorhabditis elegans Lethal protein 2,
isoform b protein.
Length = 1759
Score = 28.3 bits (60), Expect = 7.9
Identities = 16/41 (39%), Positives = 17/41 (41%), Gaps = 2/41 (4%)
Frame = -3
Query: 527 PPKXGARGFXGGXGGXGPKXX--PXXPGGGGXFXXXKXXPP 411
P G +G G G GPK P P GGG F PP
Sbjct: 331 PGLPGQKGEAGYPGRDGPKGNSGPPGPPGGGTFNDGAPGPP 371
>U22327-1|AAA64312.1| 1795|Caenorhabditis elegans alpha2(IV)
collagen protein.
Length = 1795
Score = 28.3 bits (60), Expect = 7.9
Identities = 16/41 (39%), Positives = 17/41 (41%), Gaps = 2/41 (4%)
Frame = -3
Query: 527 PPKXGARGFXGGXGGXGPKXX--PXXPGGGGXFXXXKXXPP 411
P G +G G G GPK P P GGG F PP
Sbjct: 367 PGLPGQKGEAGYPGRDGPKGNSGPPGPPGGGTFNDGAPGPP 407
>AL032652-4|CAB63398.1| 486|Caenorhabditis elegans Hypothetical
protein Y63D3A.5 protein.
Length = 486
Score = 28.3 bits (60), Expect = 7.9
Identities = 14/39 (35%), Positives = 15/39 (38%), Gaps = 1/39 (2%)
Frame = +2
Query: 782 PPXFXPPXXKKXXPPLS-PXGXXGPPPXXPXWFSPPXXG 895
PP P PP P G PPP P + PP G
Sbjct: 412 PPPGGPGAPGSYGPPQGGPGGFGPPPPGGPGAYGPPPTG 450
>AF045646-2|AAK29827.1| 371|Caenorhabditis elegans Collagen protein
103 protein.
Length = 371
Score = 28.3 bits (60), Expect = 7.9
Identities = 16/39 (41%), Positives = 16/39 (41%), Gaps = 2/39 (5%)
Frame = -1
Query: 550 GGXKXXP--PPXXPGPGVFXGGXGXGXQKXXPXXXGGGG 440
GG K P PP PGP G G Q P GG G
Sbjct: 180 GGCKTCPAGPPGPPGPAGQAGRPGNDGQPGAPSFGGGVG 218
>AF003151-19|AAK18922.1| 988|Caenorhabditis elegans Hypothetical
protein D1007.7 protein.
Length = 988
Score = 28.3 bits (60), Expect = 7.9
Identities = 16/41 (39%), Positives = 16/41 (39%)
Frame = -3
Query: 557 PXXGXXXXXPPPKXGARGFXGGXGGXGPKXXPXXPGGGGXF 435
P G PPP RG GG GG P GGG F
Sbjct: 774 PRGGMHHMPPPPSF--RGGRGGHGGPPPPHFDRRGGGGPPF 812
>AC025721-11|AAK29900.1| 78|Caenorhabditis elegans Hypothetical
protein Y48G8AL.12 protein.
Length = 78
Score = 28.3 bits (60), Expect = 7.9
Identities = 11/22 (50%), Positives = 11/22 (50%)
Frame = +3
Query: 387 FFFPXXGGGGXXFXXXKXPPPP 452
F FP GGGG PPPP
Sbjct: 17 FLFPSAGGGGGGCGCGAPPPPP 38
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,083,791
Number of Sequences: 27780
Number of extensions: 199573
Number of successful extensions: 2511
Number of sequences better than 10.0: 51
Number of HSP's better than 10.0 without gapping: 579
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2145
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2276333906
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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