Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP26_F_F20
         (878 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB013288-1|BAA87894.1|  149|Apis mellifera protein kinase C prot...    65   9e-13
AF469010-1|AAL93136.1|  678|Apis mellifera cGMP-dependent protei...    59   6e-11
AB183889-1|BAD86829.1|  316|Apis mellifera Mos protein.                51   1e-08
AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.    46   3e-07
AB013287-1|BAA87893.1|  190|Apis mellifera calmodulin kinase II ...    38   9e-05
DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase ...    32   0.008
DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase ...    32   0.008
AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul...    23   2.8  
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A...    23   2.8  
AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precurso...    22   6.5  

>AB013288-1|BAA87894.1|  149|Apis mellifera protein kinase C
           protein.
          Length = 149

 Score = 64.9 bits (151), Expect = 9e-13
 Identities = 44/140 (31%), Positives = 70/140 (50%), Gaps = 2/140 (1%)
 Frame = +3

Query: 456 KRKNPSQSVAVKVVTKKGIQKASEILVKEIKILRELTALQHKN--LVAMHDCMDSPAYVY 629
           +RK   +  A+K++ K  I +  ++    ++  + + AL  K   LV +H C  +   +Y
Sbjct: 4   ERKGTDELYAIKILKKDIIIQDDDVECTMVE--KRVLALSTKPPFLVQLHSCFQTMDRLY 61

Query: 630 VVMEYCNGGDLADYLQTNRLLSETTIQLFLAQLAEAMSAIHAKGIVHRDLKPQNILLTHS 809
            VMEY NGGDL   +Q      E     + +++A  +  +H +GIV+RDLK  N+LL   
Sbjct: 62  FVMEYVNGGDLMYQIQQCGKFKEPVAVFYASEIAIGLFFLHGRGIVYRDLKLDNVLL--- 118

Query: 810 ILPPRTPHPSDITLKIADFG 869
                     D  +KIADFG
Sbjct: 119 --------DQDGHIKIADFG 130


>AF469010-1|AAL93136.1|  678|Apis mellifera cGMP-dependent protein
           kinase foraging protein.
          Length = 678

 Score = 58.8 bits (136), Expect = 6e-11
 Identities = 37/130 (28%), Positives = 67/130 (51%), Gaps = 2/130 (1%)
 Frame = +3

Query: 417 IGHGAFAMVYKGRKRKNPSQSVAVKVVTKKGI--QKASEILVKEIKILRELTALQHKNLV 590
           +G G F  V   +   + S+S A+K + K  I   +  + ++ E +I+ E        +V
Sbjct: 373 LGVGGFGRVELVQIAGDSSRSFALKQMKKAQIVETRQQQHIMSEKRIMGEADC---DFVV 429

Query: 591 AMHDCMDSPAYVYVVMEYCNGGDLADYLQTNRLLSETTIQLFLAQLAEAMSAIHAKGIVH 770
            +        Y+Y++ME C GG+L   L+      + T + + A + EA   +H++ I++
Sbjct: 430 KLFKTFKDRKYLYMLMEACLGGELWTVLRDKGHFDDGTTRFYTACVVEAFDYLHSRNIIY 489

Query: 771 RDLKPQNILL 800
           RDLKP+N+LL
Sbjct: 490 RDLKPENLLL 499


>AB183889-1|BAD86829.1|  316|Apis mellifera Mos protein.
          Length = 316

 Score = 51.2 bits (117), Expect = 1e-08
 Identities = 41/145 (28%), Positives = 68/145 (46%)
 Frame = +3

Query: 417 IGHGAFAMVYKGRKRKNPSQSVAVKVVTKKGIQKASEILVKEIKILRELTALQHKNLVAM 596
           +G G F +VYK   +    + VA K++     +K S +L  E    +  + L+H N+V +
Sbjct: 73  LGSGGFGIVYKALYK---GEQVAAKIIQT---EKYSNMLNSE----KHASFLKHSNIVKV 122

Query: 597 HDCMDSPAYVYVVMEYCNGGDLADYLQTNRLLSETTIQLFLAQLAEAMSAIHAKGIVHRD 776
                  +   + ME C G  L + L    L+    I + L  +  A+   H  GIVH D
Sbjct: 123 LMIEQGASLSLITMELC-GTTLQNRLDEAILIKNERICI-LKSITCALQFCHNAGIVHAD 180

Query: 777 LKPQNILLTHSILPPRTPHPSDITL 851
           +KP+NIL++ +  P  T   S + +
Sbjct: 181 VKPKNILMSKNGQPKLTDFGSSVLI 205


>AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.
          Length = 996

 Score = 46.4 bits (105), Expect = 3e-07
 Identities = 36/144 (25%), Positives = 65/144 (45%), Gaps = 6/144 (4%)
 Frame = +3

Query: 402  TKQDIIGHGAFAMVYKGRKRKNPSQ----SVAVKVVTKKGIQKASEILVKEIKILRELTA 569
            T + IIG G F  V +G+ +  P       VA+K +      KA    + E  I+ +   
Sbjct: 634  TIEAIIGGGEFGDVCRGKLKLPPDGRTEIDVAIKTLKPGSADKARNDFLTEASIMGQF-- 691

Query: 570  LQHKNLVAMHDCMDSPAYVYVVMEYCNGGDLADYLQTNRLLSETTIQL--FLAQLAEAMS 743
             +H N++ +   +     V ++ E+   G L  +L+ N    +  +QL   L  +A  M 
Sbjct: 692  -EHPNVIFLQGVVTKSNPVMIITEFMENGSLDTFLRANDGKFQV-LQLVGMLRGIASGMQ 749

Query: 744  AIHAKGIVHRDLKPQNILLTHSIL 815
             +     VHRDL  +N+L+  +++
Sbjct: 750  YLAEMNYVHRDLAARNVLVNAALV 773


>AB013287-1|BAA87893.1|  190|Apis mellifera calmodulin kinase II
           protein.
          Length = 190

 Score = 38.3 bits (85), Expect = 9e-05
 Identities = 21/59 (35%), Positives = 30/59 (50%)
 Frame = +3

Query: 693 SETTIQLFLAQLAEAMSAIHAKGIVHRDLKPQNILLTHSILPPRTPHPSDITLKIADFG 869
           SE      + Q+ E++   H  G+VHRDLKP+N+LL                +K+ADFG
Sbjct: 7   SEADASHCIQQILESVHHCHHNGVVHRDLKPENLLLASK--------AKGAAVKLADFG 57


>DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase
           isoform B protein.
          Length = 931

 Score = 31.9 bits (69), Expect = 0.008
 Identities = 15/32 (46%), Positives = 24/32 (75%)
 Frame = +3

Query: 705 IQLFLAQLAEAMSAIHAKGIVHRDLKPQNILL 800
           IQ+ L  L E +  +H++G+VHRD+K +N+LL
Sbjct: 700 IQIALDVL-EGIRYLHSQGLVHRDVKLKNVLL 730


>DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase
           isoform A protein.
          Length = 969

 Score = 31.9 bits (69), Expect = 0.008
 Identities = 15/32 (46%), Positives = 24/32 (75%)
 Frame = +3

Query: 705 IQLFLAQLAEAMSAIHAKGIVHRDLKPQNILL 800
           IQ+ L  L E +  +H++G+VHRD+K +N+LL
Sbjct: 738 IQIALDVL-EGIRYLHSQGLVHRDVKLKNVLL 768


>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
            AbsCAM-Ig7B protein.
          Length = 1923

 Score = 23.4 bits (48), Expect = 2.8
 Identities = 10/36 (27%), Positives = 22/36 (61%)
 Frame = +1

Query: 424  MVLLRWSTKEGRERIRPSLLR*RWSQRKASRKRQRY 531
            +V LRW ++   +R++  +   + +Q+ A  +R+RY
Sbjct: 1630 IVALRWRSRYLGDRMQRPMKESQENQQNAETQRERY 1665


>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
            AbsCAM-Ig7A protein.
          Length = 1919

 Score = 23.4 bits (48), Expect = 2.8
 Identities = 10/36 (27%), Positives = 22/36 (61%)
 Frame = +1

Query: 424  MVLLRWSTKEGRERIRPSLLR*RWSQRKASRKRQRY 531
            +V LRW ++   +R++  +   + +Q+ A  +R+RY
Sbjct: 1626 IVALRWRSRYLGDRMQRPMKESQENQQNAETQRERY 1661


>AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precursor
            protein.
          Length = 1770

 Score = 22.2 bits (45), Expect = 6.5
 Identities = 9/20 (45%), Positives = 12/20 (60%)
 Frame = -3

Query: 681  SFEDNPLGRLHCSTP*QHRH 622
            +F  N  GR+   TP +HRH
Sbjct: 971  TFSKNVQGRVGFVTPFEHRH 990


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 226,396
Number of Sequences: 438
Number of extensions: 4889
Number of successful extensions: 14
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 28523595
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)