Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP26_F_F18
(906 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC977.08 |||short chain dehydrogenase |Schizosaccharomyces pom... 80 5e-16
SPBC1348.09 |||short chain dehydrogenase |Schizosaccharomyces po... 80 5e-16
SPAC3G9.02 |oar2||3-oxoacyl-[acyl-carrier-protein] reductase Oar... 78 1e-15
SPAC922.06 |||short chain dehydrogenase|Schizosaccharomyces pomb... 78 2e-15
SPAC521.03 |||short chain dehydrogenase |Schizosaccharomyces pom... 75 2e-14
SPAC4H3.08 |||short chain dehydrogenase |Schizosaccharomyces pom... 74 2e-14
SPBC30D10.05c |||sepiapterin reductase |Schizosaccharomyces pomb... 66 6e-12
SPAC23D3.11 |ayr1||1-acyldihydroxyacetone phosphate reductase |S... 57 4e-09
SPCC162.03 |||short chain dehydrogenase |Schizosaccharomyces pom... 55 1e-08
SPCC1739.08c |||short chain dehydrogenase|Schizosaccharomyces po... 54 4e-08
SPAC8E11.10 |||sorbose reductase |Schizosaccharomyces pombe|chr ... 53 5e-08
SPCC736.13 |||short chain dehydrogenase|Schizosaccharomyces pomb... 42 9e-05
SPCC663.08c |||short chain dehydrogenase |Schizosaccharomyces po... 41 2e-04
SPAC4G9.15 |||ketoreductase |Schizosaccharomyces pombe|chr 1|||M... 38 0.003
SPBC16H5.14c ||SPBC21H7.08|short chain dehydrogenase DHRS family... 35 0.018
SPAC19A8.06 |||short chain dehydrogenase|Schizosaccharomyces pom... 29 0.69
SPCC320.04c |||GTPase Gem1 |Schizosaccharomyces pombe|chr 3|||Ma... 27 4.8
SPBC3D6.10 |apn2||AP-endonuclease Apn2|Schizosaccharomyces pombe... 27 4.8
>SPAC977.08 |||short chain dehydrogenase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 236
Score = 79.8 bits (188), Expect = 5e-16
Identities = 46/136 (33%), Positives = 77/136 (56%), Gaps = 2/136 (1%)
Frame = +1
Query: 331 LVVVADMNNESDVENIIKKTVDNYHQLDVLVNNAGVLESGTIETTSLAQYDRIMNTNVRG 510
LV D+NN S ++ ++K + ++ ++DVL+NNAG +E+T+ Q I NTNV G
Sbjct: 17 LVTQLDVNNFSSIKKSVEKAISHFGRIDVLLNNAGYSVYSPLESTTEEQIHNIFNTNVFG 76
Query: 511 PYYLTMLAIPHLIKTK--GNIVNVSSVTGLRSFPNVLAYCISKSAIDQFTRCVALEVALK 684
+ + AI + +++ G I+NVSS+ G +FP Y +K AI+ + + E+
Sbjct: 77 ALEV-IKAITPIFRSQHNGMIINVSSIGGKMTFPLGCLYYGTKYAIEGISEALTWEMQSI 135
Query: 685 GVRVNAVNPGVIATGY 732
GV+V + PG AT +
Sbjct: 136 GVKVKIIEPGFTATEF 151
>SPBC1348.09 |||short chain dehydrogenase |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 236
Score = 79.8 bits (188), Expect = 5e-16
Identities = 46/136 (33%), Positives = 77/136 (56%), Gaps = 2/136 (1%)
Frame = +1
Query: 331 LVVVADMNNESDVENIIKKTVDNYHQLDVLVNNAGVLESGTIETTSLAQYDRIMNTNVRG 510
LV D+NN S ++ ++K + ++ ++DVL+NNAG +E+T+ Q I NTNV G
Sbjct: 17 LVTQLDVNNFSSIKKSVEKAISHFGRIDVLLNNAGYSVYSPLESTTEEQIHNIFNTNVFG 76
Query: 511 PYYLTMLAIPHLIKTK--GNIVNVSSVTGLRSFPNVLAYCISKSAIDQFTRCVALEVALK 684
+ + AI + +++ G I+NVSS+ G +FP Y +K AI+ + + E+
Sbjct: 77 ALEV-IKAITPIFRSQHNGMIINVSSIGGKMTFPLGCLYYGTKYAIEGISEALTWEMQSI 135
Query: 685 GVRVNAVNPGVIATGY 732
GV+V + PG AT +
Sbjct: 136 GVKVKIIEPGFTATEF 151
>SPAC3G9.02 |oar2||3-oxoacyl-[acyl-carrier-protein] reductase Oar2
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 236
Score = 78.2 bits (184), Expect = 1e-15
Identities = 46/136 (33%), Positives = 79/136 (58%), Gaps = 5/136 (3%)
Frame = +1
Query: 334 VVVADMNNESDVENIIKKTVDNYHQLDVLVNNAGVLESGTIETTSLAQYDRIMNTNVRGP 513
+ +AD+ +SD++N+ K++ ++D +V+ AGVL+S TS + D I+ TN+
Sbjct: 55 LTIADV--QSDMKNL--KSIFESVEIDTVVHAAGVLQSSLCVRTSEKEIDSIICTNLVSA 110
Query: 514 YYLTMLAIPHLIKTKGN-----IVNVSSVTGLRSFPNVLAYCISKSAIDQFTRCVALEVA 678
L+ +AI + K + I+N+SS + P Y SK+ ++ FT+ +A EVA
Sbjct: 111 IKLSKMAILEWFRNKNSERDRLILNISSRLSTYALPGTSVYAASKAGLESFTKVLAAEVA 170
Query: 679 LKGVRVNAVNPGVIAT 726
KG+RVNA++PG + T
Sbjct: 171 SKGIRVNAISPGYVDT 186
>SPAC922.06 |||short chain dehydrogenase|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 258
Score = 77.8 bits (183), Expect = 2e-15
Identities = 44/140 (31%), Positives = 72/140 (51%), Gaps = 4/140 (2%)
Frame = +1
Query: 313 PXKIKP--LVVVADMNNESDVENIIKKTVDNYHQLDVLVNNAGVLESGTIETTSLAQYDR 486
P K++ L + AD++ +E I+K + +DVL+NNAG+ + E S +D
Sbjct: 40 PSKVQDAALALQADVSKADQIETAIEKVIQTLGPIDVLINNAGLADDTPFEQLSHESWDH 99
Query: 487 IMNTNVRGPYYLTMLAIPHLIK--TKGNIVNVSSVTGLRSFPNVLAYCISKSAIDQFTRC 660
++ +RG Y IPH+ K G+IVN+ SV G + AY +K+ ++ T+
Sbjct: 100 DVSLVLRGNYLTQRYVIPHMAKQGKGGSIVNIGSVNG-HIYLGSPAYSAAKAGLENLTKA 158
Query: 661 VALEVALKGVRVNAVNPGVI 720
+A+ G+RVN PG I
Sbjct: 159 LAVRYGPLGIRVNVCAPGTI 178
>SPAC521.03 |||short chain dehydrogenase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 259
Score = 74.5 bits (175), Expect = 2e-14
Identities = 44/141 (31%), Positives = 74/141 (52%), Gaps = 3/141 (2%)
Frame = +1
Query: 319 KIKPLVVVADMNNESDVENIIKKTVDNYHQLDVLVNNAGVLESGTIETTSLAQYDRI--M 492
++ L + D+++ + +I+ + +DVL+NNAG L GT + L D + +
Sbjct: 56 EVSVLPLKLDVSDLKSIPGVIESLPKEFADIDVLINNAG-LALGTDKVIDLNIDDAVTMI 114
Query: 493 NTNVRGPYYLTMLAIPHLI-KTKGNIVNVSSVTGLRSFPNVLAYCISKSAIDQFTRCVAL 669
TNV G +T +P K KG+I+NV S+ G S+ YC +KSA+ QFT +
Sbjct: 115 TTNVLGMMAMTRAVLPIFYSKNKGDILNVGSIAGRESYVGGSVYCSTKSALAQFTSALRK 174
Query: 670 EVALKGVRVNAVNPGVIATGY 732
E +R+ V+PG++ T +
Sbjct: 175 ETIDTRIRIMEVDPGLVETEF 195
Score = 48.4 bits (110), Expect = 1e-06
Identities = 22/48 (45%), Positives = 33/48 (68%), Gaps = 1/48 (2%)
Frame = +3
Query: 168 KVVIITGASSGIGAETAYEFAKL-NAKLVLTGRKKENLDNVASDCESR 308
K ++ITGASSGIG TA+E AK+ KL+L R+ ++ +A + ES+
Sbjct: 7 KTILITGASSGIGKSTAFEIAKVAKVKLILAARRFSTVEEIAKELESK 54
>SPAC4H3.08 |||short chain dehydrogenase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 286
Score = 74.1 bits (174), Expect = 2e-14
Identities = 53/152 (34%), Positives = 81/152 (53%), Gaps = 1/152 (0%)
Frame = +1
Query: 409 LDVLVNNAGVLE-SGTIETTSLAQYDRIMNTNVRGPYYLTMLAIPHLIKTKGNIVNVSSV 585
+DVLVNN + + +IE Q+D TN+ +++T AI H+ K+ +IVN SS+
Sbjct: 122 IDVLVNNIAYQQVAQSIEDIDDEQWDLTFKTNIFSFFWVTKAAISHM-KSGSSIVNCSSI 180
Query: 586 TGLRSFPNVLAYCISKSAIDQFTRCVALEVALKGVRVNAVNPGVIATGYIKKAKEV*TKN 765
P++L Y +K AI FTR ++ + A G+RVNAV PG I T + K
Sbjct: 181 NAYVGRPDLLDYTSTKGAITAFTRGLSNQYAQHGIRVNAVAPGPIYTPLVSSTF---PKE 237
Query: 766 NIKLFLAKCAETHALGRPGDAKKVSSXHRFLS 861
I+L ++ LGR G +V+S + FL+
Sbjct: 238 KIEL-----SDQVPLGRMGQPVEVASCYLFLA 264
Score = 29.5 bits (63), Expect = 0.69
Identities = 15/40 (37%), Positives = 22/40 (55%)
Frame = +3
Query: 162 ANKVVIITGASSGIGAETAYEFAKLNAKLVLTGRKKENLD 281
A K ++TG SGIG A FA+ + LV++ +E D
Sbjct: 41 AEKKTLLTGGDSGIGKAAAVMFAREGSDLVISCLPEERDD 80
>SPBC30D10.05c |||sepiapterin reductase |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 247
Score = 66.1 bits (154), Expect = 6e-12
Identities = 42/117 (35%), Positives = 60/117 (51%), Gaps = 1/117 (0%)
Frame = +1
Query: 379 IKKTVDNYHQLDVLVNNAGVLES-GTIETTSLAQYDRIMNTNVRGPYYLTMLAIPHLIKT 555
I+ + + +LD ++ NAGVLE I + ++ ++ + N AIPHL KT
Sbjct: 69 IETAIKKFGKLDSVILNAGVLEPIAKIADADINEWRKLFDINFFSVVETVKYAIPHLRKT 128
Query: 556 KGNIVNVSSVTGLRSFPNVLAYCISKSAIDQFTRCVALEVALKGVRVNAVNPGVIAT 726
KG IV VSS +R FP AYC SK+AI+ + E + AV PGV+ T
Sbjct: 129 KGTIVIVSSGAAVRVFPAWAAYCCSKAAINMLVMNLGSEE--PDIMSVAVRPGVVDT 183
Score = 30.7 bits (66), Expect = 0.30
Identities = 15/34 (44%), Positives = 22/34 (64%)
Frame = +3
Query: 162 ANKVVIITGASSGIGAETAYEFAKLNAKLVLTGR 263
A KV+++TG+S GIG TA E + AK++ R
Sbjct: 5 AEKVILLTGSSKGIGLATA-EALQKKAKVIAVSR 37
>SPAC23D3.11 |ayr1||1-acyldihydroxyacetone phosphate reductase
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 296
Score = 56.8 bits (131), Expect = 4e-09
Identities = 37/129 (28%), Positives = 63/129 (48%)
Frame = +1
Query: 340 VADMNNESDVENIIKKTVDNYHQLDVLVNNAGVLESGTIETTSLAQYDRIMNTNVRGPYY 519
V D ++ +VE ++K + L L+NNAG S + ++M+ N G
Sbjct: 57 VTDEDSVREVEQEVRKFTNG--SLHYLINNAGAPCSAPAIDLDIEDVSKVMDVNFYGVIR 114
Query: 520 LTMLAIPHLIKTKGNIVNVSSVTGLRSFPNVLAYCISKSAIDQFTRCVALEVALKGVRVN 699
+ LI+ KG IVNV+S+ F AY SK+A+ ++ + +E+A GV+V
Sbjct: 115 MNKAFQHQLIRAKGTIVNVNSLVSYVPFAFNAAYNASKAALLAYSNTLRIELAPFGVQVT 174
Query: 700 AVNPGVIAT 726
++ G + T
Sbjct: 175 SIMTGGVQT 183
Score = 32.7 bits (71), Expect = 0.074
Identities = 18/45 (40%), Positives = 27/45 (60%), Gaps = 1/45 (2%)
Frame = +3
Query: 156 MFANKVVIITGASSG-IGAETAYEFAKLNAKLVLTGRKKENLDNV 287
M A K V+ITG S G IG A +F + +++ T R+ E +DN+
Sbjct: 1 MEAEKFVLITGCSEGGIGNALALKFHQEGFQVLATARQVERMDNL 45
>SPCC162.03 |||short chain dehydrogenase |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 292
Score = 55.2 bits (127), Expect = 1e-08
Identities = 37/137 (27%), Positives = 66/137 (48%), Gaps = 3/137 (2%)
Frame = +1
Query: 325 KPLVVVADMNNESDVENIIKKTVDNYHQLDVLVNNAGVLESGTIETTSLAQYDRIMNTNV 504
K L + D+ + VE K + +D+++NNAG G E+ ++ + R MN N
Sbjct: 48 KLLKLKLDVTDVKSVETAFKDAKRRFGNVDIVINNAGYGLVGEFESYNIEEMHRQMNVNF 107
Query: 505 RGPYYLTMLAIPHLIKT--KGNIVNVSSVTGLRSFPNVLAYCISKSAIDQFTRCVALEVA 678
G Y+T A+ + ++ G I+ +SSV G P + Y SK A++ ++ + E+
Sbjct: 108 WGVAYITKEALNLMRESGKGGRILQISSVAGYYPSPCLSMYNASKFAVEGLSQTIMRELD 167
Query: 679 LK-GVRVNAVNPGVIAT 726
+ + V PG + T
Sbjct: 168 PNWNIAITIVQPGGMQT 184
>SPCC1739.08c |||short chain dehydrogenase|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 261
Score = 53.6 bits (123), Expect = 4e-08
Identities = 34/131 (25%), Positives = 73/131 (55%), Gaps = 4/131 (3%)
Frame = +1
Query: 346 DMNNESDVENIIKKTVDNYHQLDVLVNNAGVLESGTIETTSLAQYDRIMNTNVRGPYYLT 525
D++ VE +++ + ++ V+V NAG+ ++ + +++++MN N Y +
Sbjct: 78 DISRSDTVEAGVEEIQKIFKEIHVVVANAGMPFRRSVLDSPPHEFEKVMNINTNSVYRVA 137
Query: 526 MLAIPHLIKTK--GNIVNVSSV--TGLRSFPNVLAYCISKSAIDQFTRCVALEVALKGVR 693
+ + K + GN++ +S+ T + + ++ AYC SK+A+ Q + +A+E A + R
Sbjct: 138 YY-MGKIFKKQGFGNLIATASMSATIVNAPQHIAAYCASKAAVRQLCKALAVEWA-EFAR 195
Query: 694 VNAVNPGVIAT 726
+N+V+PG AT
Sbjct: 196 INSVSPGYFAT 206
>SPAC8E11.10 |||sorbose reductase |Schizosaccharomyces pombe|chr
1|||Manual
Length = 255
Score = 53.2 bits (122), Expect = 5e-08
Identities = 41/139 (29%), Positives = 73/139 (52%), Gaps = 5/139 (3%)
Frame = +1
Query: 349 MNNESDVENIIKKTVDNYH-QLDVLVNNAGV-LESGTIETTSLAQYDRIMNTNVRGPYYL 522
+ N S V + V+ +LDV++ NAG+ + ++E + + +++ N+ G YY
Sbjct: 68 IENRSAVIETTNQAVEELGGRLDVMIANAGIAIPHLSLEDKNEDIWTKVVGINLNGAYYT 127
Query: 523 TMLAIPHLIKT-KGNIVNVSSVTG-LRSFPNVLA-YCISKSAIDQFTRCVALEVALKGVR 693
A H K KG+++ +S++G + ++P A Y +K+A+ R +A+E A R
Sbjct: 128 AQAAGHHFKKQGKGSLIFTASMSGHIANWPQQWASYHATKAAVKHLARALAVEWA-PFAR 186
Query: 694 VNAVNPGVIATGYIKKAKE 750
VN+V+PG I T A E
Sbjct: 187 VNSVSPGYIDTDLTLYADE 205
Score = 31.9 bits (69), Expect = 0.13
Identities = 20/50 (40%), Positives = 27/50 (54%), Gaps = 3/50 (6%)
Frame = +3
Query: 150 TEMFA--NKVVIITGASSGIGAETAYEFAKLNAKL-VLTGRKKENLDNVA 290
T MF+ K +ITG S GIG A FA + + +L GR K+ L+ A
Sbjct: 2 TSMFSLKGKTTLITGGSGGIGFSIAKAFAAAGSNVGLLYGRNKKALEYAA 51
>SPCC736.13 |||short chain dehydrogenase|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 339
Score = 42.3 bits (95), Expect = 9e-05
Identities = 23/66 (34%), Positives = 33/66 (50%), Gaps = 4/66 (6%)
Frame = +3
Query: 102 VINLSRNFTKL----WKLLCTEMFANKVVIITGASSGIGAETAYEFAKLNAKLVLTGRKK 269
++N + +T L W KV ++TG+S GIG TA E A+ AK+ L GR +
Sbjct: 17 IVNTLKEYTGLNTPKWTFNDIPDLTGKVALVTGSSGGIGYVTALELARKGAKVYLAGRNE 76
Query: 270 ENLDNV 287
E V
Sbjct: 77 EKYQKV 82
Score = 29.1 bits (62), Expect = 0.91
Identities = 20/70 (28%), Positives = 33/70 (47%)
Frame = +1
Query: 346 DMNNESDVENIIKKTVDNYHQLDVLVNNAGVLESGTIETTSLAQYDRIMNTNVRGPYYLT 525
D+ + V + + +L +LVNNAG++ + E T Y+ + TN Y T
Sbjct: 101 DLLDFESVYQAAESFIAKEEKLHILVNNAGIM-NPPFELTK-DGYELQIQTNYLSHYLFT 158
Query: 526 MLAIPHLIKT 555
L +P L +T
Sbjct: 159 ELLLPTLRRT 168
>SPCC663.08c |||short chain dehydrogenase |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 253
Score = 41.1 bits (92), Expect = 2e-04
Identities = 37/134 (27%), Positives = 66/134 (49%), Gaps = 5/134 (3%)
Frame = +1
Query: 340 VADMNNESDVENIIKKTVDNYHQLDVLVNNAGVLES-GTIETTSLAQYDRIMNTNVRGPY 516
V+ + + ++ + K VD +DVL N+ V S G + T ++ TNV GP
Sbjct: 63 VSSLESANEAAQEVTKVVD---AVDVLWVNSAVFHSFGPVVNTPDDVWNSHYKTNVLGPI 119
Query: 517 YLTMLAIPHLIKTKGN-IVNVSSVTGLRS--FP-NVLAYCISKSAIDQFTRCVALEVALK 684
++ P + K + IV SS+ G FP + AY SK+A++ + ++ E+ +
Sbjct: 120 HVYQAFYPLIKKGRSKIIVFTSSLAGSMGAFFPSSQSAYGQSKAALNYTMKEISFELQDE 179
Query: 685 GVRVNAVNPGVIAT 726
G V +++PG + T
Sbjct: 180 GFIVISIHPGAVRT 193
>SPAC4G9.15 |||ketoreductase |Schizosaccharomyces pombe|chr
1|||Manual
Length = 341
Score = 37.5 bits (83), Expect = 0.003
Identities = 18/52 (34%), Positives = 30/52 (57%)
Frame = +3
Query: 177 IITGASSGIGAETAYEFAKLNAKLVLTGRKKENLDNVASDCESRSPX*NKTV 332
++TGA+ GIG E A + A +VL R +E LD +A + E+ + +T+
Sbjct: 61 VVTGATDGIGKEYATQLAMSGFNVVLISRTQEKLDALAKELETVAKVKTRTI 112
>SPBC16H5.14c ||SPBC21H7.08|short chain dehydrogenase DHRS family
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 286
Score = 34.7 bits (76), Expect = 0.018
Identities = 24/100 (24%), Positives = 43/100 (43%), Gaps = 1/100 (1%)
Frame = +1
Query: 346 DMNNESDVENIIKKTVDNYHQLDVLVNNAGVLESGTIETTSLAQYDRIMNTNVRGPYYLT 525
++ + DVE + L+N A + + + S + + TNV G +T
Sbjct: 86 NITKDKDVEGCVHSLKKMNRTPFALINAAAIAPKNHLLSISRQELQKCFETNVIGQLAIT 145
Query: 526 MLAIPHLIKTKG-NIVNVSSVTGLRSFPNVLAYCISKSAI 642
P L++ ++VN++S S V AY SK+A+
Sbjct: 146 SALFPLLLQDPNPHVVNIASSLAYFSAMGVGAYSSSKAAL 185
>SPAC19A8.06 |||short chain dehydrogenase|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 397
Score = 29.5 bits (63), Expect = 0.69
Identities = 13/28 (46%), Positives = 19/28 (67%)
Frame = +3
Query: 171 VVIITGASSGIGAETAYEFAKLNAKLVL 254
VV++TG SSGIG + A L A++V+
Sbjct: 77 VVMVTGGSSGIGQVVVEKLASLGAQVVI 104
>SPCC320.04c |||GTPase Gem1 |Schizosaccharomyces pombe|chr
3|||Manual
Length = 630
Score = 26.6 bits (56), Expect = 4.8
Identities = 9/22 (40%), Positives = 14/22 (63%)
Frame = -2
Query: 833 FXASPGLPRAWVSAHFAKKSLI 768
F +PGLP WVS+ F +++
Sbjct: 333 FRHTPGLPEIWVSSQFPNSTVL 354
>SPBC3D6.10 |apn2||AP-endonuclease Apn2|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 523
Score = 26.6 bits (56), Expect = 4.8
Identities = 11/22 (50%), Positives = 15/22 (68%)
Frame = +1
Query: 334 VVVADMNNESDVENIIKKTVDN 399
+ V D NNESD+ +KK V+N
Sbjct: 421 IEVLDNNNESDIGLTVKKKVEN 442
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,446,733
Number of Sequences: 5004
Number of extensions: 70257
Number of successful extensions: 199
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 177
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 191
length of database: 2,362,478
effective HSP length: 72
effective length of database: 2,002,190
effective search space used: 458501510
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -