Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP26_F_F17
         (890 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

12_01_1021 - 10419383-10419529,10419684-10419733,10419821-104199...    30   2.1  
11_06_0768 + 27129007-27129038,27129140-27129220,27129723-271300...    28   8.7  

>12_01_1021 -
           10419383-10419529,10419684-10419733,10419821-10419938,
           10420498-10420540,10420674-10420825,10420876-10420965,
           10422881-10423013,10424397-10424515
          Length = 283

 Score = 30.3 bits (65), Expect = 2.1
 Identities = 13/40 (32%), Positives = 24/40 (60%)
 Frame = -2

Query: 616 SWHLRVILRTVKSSVIGMNFSFIIQSRHSYSIYNIRNTKI 497
           S++ +V L   + SV+G+NF F++ +   +S Y I N  +
Sbjct: 27  SFYPQVFLNFKRKSVVGLNFDFLVLNLTKHSSYLIYNAAL 66


>11_06_0768 + 27129007-27129038,27129140-27129220,27129723-27130089,
            27130165-27130255,27130515-27130595,27130764-27131830,
            27132060-27132071,27132465-27133209,27133210-27135244,
            27135712-27135787,27135925-27136029,27137080-27137166
          Length = 1592

 Score = 28.3 bits (60), Expect = 8.7
 Identities = 12/32 (37%), Positives = 19/32 (59%)
 Frame = -2

Query: 559  FSFIIQSRHSYSIYNIRNTKISRTLKL*NWLE 464
            F+F  +SR + ++YN    K+  T KL  WL+
Sbjct: 945  FNFGAESRANKALYNFTADKVEPTTKLDKWLD 976


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,488,794
Number of Sequences: 37544
Number of extensions: 283943
Number of successful extensions: 438
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 431
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 437
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2506954360
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)