Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP26_F_F17
(890 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z83117-6|CAN86902.1| 1931|Caenorhabditis elegans Hypothetical pr... 33 0.36
Z83117-5|CAN86901.1| 1971|Caenorhabditis elegans Hypothetical pr... 33 0.36
Z83117-4|CAB05572.2| 2032|Caenorhabditis elegans Hypothetical pr... 33 0.36
Z80219-10|CAN86596.1| 1931|Caenorhabditis elegans Hypothetical p... 33 0.36
Z80219-9|CAN86595.1| 1971|Caenorhabditis elegans Hypothetical pr... 33 0.36
Z80219-8|CAB02303.2| 2032|Caenorhabditis elegans Hypothetical pr... 33 0.36
AJ276020-1|CAC81668.1| 1971|Caenorhabditis elegans putative TRP ... 33 0.36
Z47073-4|CAM33507.1| 954|Caenorhabditis elegans Hypothetical pr... 29 4.5
Z47073-3|CAA87374.1| 999|Caenorhabditis elegans Hypothetical pr... 29 4.5
>Z83117-6|CAN86902.1| 1931|Caenorhabditis elegans Hypothetical protein
T01H8.5d protein.
Length = 1931
Score = 32.7 bits (71), Expect = 0.36
Identities = 19/58 (32%), Positives = 30/58 (51%)
Frame = -1
Query: 515 HPKYENIPNSQTIKLAGIRINNISQSSSENFVLSMKSKGGGEIVDIXRGTSRRLFKET 342
H +Y +I +S I+ RI N +SSE+ ++ S+GGG + R S R + T
Sbjct: 1738 HEEYTSITDSIAIRHPERRIRNNRSNSSEHDESAVDSEGGGNVTSSPRKRSTRDLRMT 1795
>Z83117-5|CAN86901.1| 1971|Caenorhabditis elegans Hypothetical protein
T01H8.5c protein.
Length = 1971
Score = 32.7 bits (71), Expect = 0.36
Identities = 19/58 (32%), Positives = 30/58 (51%)
Frame = -1
Query: 515 HPKYENIPNSQTIKLAGIRINNISQSSSENFVLSMKSKGGGEIVDIXRGTSRRLFKET 342
H +Y +I +S I+ RI N +SSE+ ++ S+GGG + R S R + T
Sbjct: 1778 HEEYTSITDSIAIRHPERRIRNNRSNSSEHDESAVDSEGGGNVTSSPRKRSTRDLRMT 1835
>Z83117-4|CAB05572.2| 2032|Caenorhabditis elegans Hypothetical protein
T01H8.5a protein.
Length = 2032
Score = 32.7 bits (71), Expect = 0.36
Identities = 19/58 (32%), Positives = 30/58 (51%)
Frame = -1
Query: 515 HPKYENIPNSQTIKLAGIRINNISQSSSENFVLSMKSKGGGEIVDIXRGTSRRLFKET 342
H +Y +I +S I+ RI N +SSE+ ++ S+GGG + R S R + T
Sbjct: 1839 HEEYTSITDSIAIRHPERRIRNNRSNSSEHDESAVDSEGGGNVTSSPRKRSTRDLRMT 1896
>Z80219-10|CAN86596.1| 1931|Caenorhabditis elegans Hypothetical
protein T01H8.5d protein.
Length = 1931
Score = 32.7 bits (71), Expect = 0.36
Identities = 19/58 (32%), Positives = 30/58 (51%)
Frame = -1
Query: 515 HPKYENIPNSQTIKLAGIRINNISQSSSENFVLSMKSKGGGEIVDIXRGTSRRLFKET 342
H +Y +I +S I+ RI N +SSE+ ++ S+GGG + R S R + T
Sbjct: 1738 HEEYTSITDSIAIRHPERRIRNNRSNSSEHDESAVDSEGGGNVTSSPRKRSTRDLRMT 1795
>Z80219-9|CAN86595.1| 1971|Caenorhabditis elegans Hypothetical protein
T01H8.5c protein.
Length = 1971
Score = 32.7 bits (71), Expect = 0.36
Identities = 19/58 (32%), Positives = 30/58 (51%)
Frame = -1
Query: 515 HPKYENIPNSQTIKLAGIRINNISQSSSENFVLSMKSKGGGEIVDIXRGTSRRLFKET 342
H +Y +I +S I+ RI N +SSE+ ++ S+GGG + R S R + T
Sbjct: 1778 HEEYTSITDSIAIRHPERRIRNNRSNSSEHDESAVDSEGGGNVTSSPRKRSTRDLRMT 1835
>Z80219-8|CAB02303.2| 2032|Caenorhabditis elegans Hypothetical protein
T01H8.5a protein.
Length = 2032
Score = 32.7 bits (71), Expect = 0.36
Identities = 19/58 (32%), Positives = 30/58 (51%)
Frame = -1
Query: 515 HPKYENIPNSQTIKLAGIRINNISQSSSENFVLSMKSKGGGEIVDIXRGTSRRLFKET 342
H +Y +I +S I+ RI N +SSE+ ++ S+GGG + R S R + T
Sbjct: 1839 HEEYTSITDSIAIRHPERRIRNNRSNSSEHDESAVDSEGGGNVTSSPRKRSTRDLRMT 1896
>AJ276020-1|CAC81668.1| 1971|Caenorhabditis elegans putative TRP
homologous cationchannel protein.
Length = 1971
Score = 32.7 bits (71), Expect = 0.36
Identities = 19/58 (32%), Positives = 30/58 (51%)
Frame = -1
Query: 515 HPKYENIPNSQTIKLAGIRINNISQSSSENFVLSMKSKGGGEIVDIXRGTSRRLFKET 342
H +Y +I +S I+ RI N +SSE+ ++ S+GGG + R S R + T
Sbjct: 1778 HEEYTSITDSIAIRHPERRIRNNRSNSSEHDESAVDSEGGGNVTSSPRKRSTRDLRMT 1835
>Z47073-4|CAM33507.1| 954|Caenorhabditis elegans Hypothetical protein
ZC506.4b protein.
Length = 954
Score = 29.1 bits (62), Expect = 4.5
Identities = 21/71 (29%), Positives = 36/71 (50%), Gaps = 2/71 (2%)
Frame = +1
Query: 460 RIPANFIV*EF-GIFSYFGCYR*SSCVYFEL*TRNSFQLRNS*LCVI*HVNA-MTLFCNV 633
++P NF +F G Y C S ++F T + FQ++ S LC+ ++A + L C
Sbjct: 816 KVPENFNETKFIGFSMYTTCVVWLSWIFFFFGTGSDFQIQTSSLCISISMSANVALACIF 875
Query: 634 IARLLIVCDKK 666
+L I+ +K
Sbjct: 876 SPKLWIILFEK 886
>Z47073-3|CAA87374.1| 999|Caenorhabditis elegans Hypothetical protein
ZC506.4a protein.
Length = 999
Score = 29.1 bits (62), Expect = 4.5
Identities = 21/71 (29%), Positives = 36/71 (50%), Gaps = 2/71 (2%)
Frame = +1
Query: 460 RIPANFIV*EF-GIFSYFGCYR*SSCVYFEL*TRNSFQLRNS*LCVI*HVNA-MTLFCNV 633
++P NF +F G Y C S ++F T + FQ++ S LC+ ++A + L C
Sbjct: 861 KVPENFNETKFIGFSMYTTCVVWLSWIFFFFGTGSDFQIQTSSLCISISMSANVALACIF 920
Query: 634 IARLLIVCDKK 666
+L I+ +K
Sbjct: 921 SPKLWIILFEK 931
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,864,445
Number of Sequences: 27780
Number of extensions: 307191
Number of successful extensions: 655
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 634
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 655
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2255353870
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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