Bombyx BLAST Result against spombe

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP26_F_F14
         (872 letters)

Database: spombe 
           5004 sequences; 2,362,478 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SPCC622.15c |||sequence orphan|Schizosaccharomyces pombe|chr 3||...    29   0.65 
SPAC4F10.16c |||P-type ATPase |Schizosaccharomyces pombe|chr 1||...    29   0.65 
SPBC21D10.06c |map4||cell agglutination protein Map4|Schizosacch...    28   2.0  
SPBC19C2.05 |ran1|pat1|serine/threonine protein kinase Ran1|Schi...    27   2.6  
SPBC1685.01 |pmp1||dual-specificity MAP kinase phosphatase Pmp1|...    27   4.6  
SPAC9G1.02 |wis4|wak1, wik1|MAP kinase kinase kinase Wis4|Schizo...    27   4.6  
SPAC22G7.04 |ubp13|pan2|poly|Schizosaccharomyces pombe|chr 1|||M...    27   4.6  
SPBP19A11.02c |||sequence orphan|Schizosaccharomyces pombe|chr 2...    26   8.1  

>SPCC622.15c |||sequence orphan|Schizosaccharomyces pombe|chr
           3|||Manual
          Length = 557

 Score = 29.5 bits (63), Expect = 0.65
 Identities = 21/60 (35%), Positives = 30/60 (50%), Gaps = 5/60 (8%)
 Frame = +3

Query: 162 NDRNGYEPIDNRPYIVNPPKD-YNPNG-NGYEPIDNGAYYVDPPQG---RPYFKPTPFPG 326
           N+R  Y+  +++ Y   P +D YN N  N Y PI N  Y+++   G    PYF     PG
Sbjct: 100 NNRTYYK--NSQGYRRKPKRDDYNNNRKNFYPPIQNSTYFINATGGIDSMPYFGLNNAPG 157


>SPAC4F10.16c |||P-type ATPase |Schizosaccharomyces pombe|chr
           1|||Manual
          Length = 1367

 Score = 29.5 bits (63), Expect = 0.65
 Identities = 13/39 (33%), Positives = 21/39 (53%)
 Frame = -1

Query: 362 NFLRYSLLPTASTRERGRLEVRSALGRVHVICTVVDRFV 246
           NF    ++P  STR+R  + +R   G +H+IC   D  +
Sbjct: 756 NFRVLDIIPFTSTRKRMSVIIRDEDGIIHLICKGADTVI 794


>SPBC21D10.06c |map4||cell agglutination protein
           Map4|Schizosaccharomyces pombe|chr 2|||Manual
          Length = 948

 Score = 27.9 bits (59), Expect = 2.0
 Identities = 16/50 (32%), Positives = 29/50 (58%)
 Frame = +1

Query: 175 ATNLLTTARTSLILPKITTLMETATNLSTTVHITWTLPKADLTSSLPLSL 324
           A+ L +++ T+ + P  +T  ET ++ S+    T T+  +  TSS P+SL
Sbjct: 234 ASTLESSSLTNTVSPTESTFYETKSSTSSVP--TQTIDSSSFTSSTPVSL 281


>SPBC19C2.05 |ran1|pat1|serine/threonine protein kinase
           Ran1|Schizosaccharomyces pombe|chr 2|||Manual
          Length = 470

 Score = 27.5 bits (58), Expect = 2.6
 Identities = 20/55 (36%), Positives = 23/55 (41%), Gaps = 1/55 (1%)
 Frame = +3

Query: 135 AMANAQVVINDRNGYEPIDNRPYIVNPPKDYNPNGNGYEPIDNGAYYVDP-PQGR 296
           A A A  V N+ N Y PI   PY  N      PN     PI    + + P P GR
Sbjct: 404 AAAAAAAVHNNANSYMPITPTPYPNNAKIFGYPNQPPLTPIPFTGFVLHPAPVGR 458


>SPBC1685.01 |pmp1||dual-specificity MAP kinase phosphatase
           Pmp1|Schizosaccharomyces pombe|chr 2|||Manual
          Length = 278

 Score = 26.6 bits (56), Expect = 4.6
 Identities = 14/33 (42%), Positives = 16/33 (48%)
 Frame = +3

Query: 216 PKDYNPNGNGYEPIDNGAYYVDPPQGRPYFKPT 314
           PK   PN N  +P  NG   + PP    Y KPT
Sbjct: 46  PKASKPNSN--QPYPNGPVCIYPPNIYLYAKPT 76


>SPAC9G1.02 |wis4|wak1, wik1|MAP kinase kinase kinase
            Wis4|Schizosaccharomyces pombe|chr 1|||Manual
          Length = 1401

 Score = 26.6 bits (56), Expect = 4.6
 Identities = 10/36 (27%), Positives = 17/36 (47%)
 Frame = +2

Query: 248  RTYRQRCILRGPSPRPTLLQAYPFPWCSRWEVKNIL 355
            R + ++C  R P  RP  +     PW + +  K I+
Sbjct: 1280 RDFIEQCFERDPEQRPRAVDLLTHPWITDFRKKTII 1315


>SPAC22G7.04 |ubp13|pan2|poly|Schizosaccharomyces pombe|chr
           1|||Manual
          Length = 1115

 Score = 26.6 bits (56), Expect = 4.6
 Identities = 13/52 (25%), Positives = 26/52 (50%), Gaps = 5/52 (9%)
 Frame = +3

Query: 144 NAQVVINDRNGYEPIDNRPYIVNPPKDYNPNGN-----GYEPIDNGAYYVDP 284
           N ++++ D N ++P++          D + +GN     GY  + +G Y +DP
Sbjct: 186 NGEIILRDPNSFQPVNKVVAHTGTISDIDTSGNLLLSCGYS-LRHGTYMLDP 236


>SPBP19A11.02c |||sequence orphan|Schizosaccharomyces pombe|chr
           2|||Manual
          Length = 244

 Score = 25.8 bits (54), Expect = 8.1
 Identities = 15/44 (34%), Positives = 28/44 (63%), Gaps = 3/44 (6%)
 Frame = +1

Query: 166 TETATNLLTTAR-TSLILPKITTLMETATNL--STTVHITWTLP 288
           TET+T+ +T+   TS++ P  T+   T T +  +T+++ T T+P
Sbjct: 54  TETSTHSVTSTNITSIVPPPSTSHNSTTTTVPPTTSMNTTTTVP 97


  Database: spombe
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 2,362,478
  Number of sequences in database:  5004
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,718,098
Number of Sequences: 5004
Number of extensions: 49905
Number of successful extensions: 137
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 130
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 137
length of database: 2,362,478
effective HSP length: 72
effective length of database: 2,002,190
effective search space used: 436477420
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)