Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP26_F_F14
         (872 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF039047-13|AAM15587.1|  402|Caenorhabditis elegans Coexpressed ...    29   3.3  
Z81134-7|CAD56602.1|  879|Caenorhabditis elegans Hypothetical pr...    29   4.3  
Z81134-6|CAB03450.2|  795|Caenorhabditis elegans Hypothetical pr...    29   4.3  
AL117202-32|CAD56611.1|  879|Caenorhabditis elegans Hypothetical...    29   4.3  
AL117202-31|CAD56610.1|  795|Caenorhabditis elegans Hypothetical...    29   4.3  
Z72504-5|CAA96602.2|  812|Caenorhabditis elegans Hypothetical pr...    29   5.7  
Z72504-4|CAH60755.1|  653|Caenorhabditis elegans Hypothetical pr...    29   5.7  
X91045-1|CAA62505.1|  693|Caenorhabditis elegans let-653 protein.      29   5.7  
AL022270-2|CAB63433.2|  952|Caenorhabditis elegans Hypothetical ...    28   7.6  
AF100656-6|AAF99961.1|  240|Caenorhabditis elegans Hypothetical ...    28   7.6  

>AF039047-13|AAM15587.1|  402|Caenorhabditis elegans Coexpressed
           with polycystins protein4 protein.
          Length = 402

 Score = 29.5 bits (63), Expect = 3.3
 Identities = 23/65 (35%), Positives = 31/65 (47%)
 Frame = +1

Query: 127 LCWLWPTLKL*SMTETATNLLTTARTSLILPKITTLMETATNLSTTVHITWTLPKADLTS 306
           LC+LW  L     T T T   TT  TS   P  TT      N +TT     T+P  + T+
Sbjct: 179 LCYLWVPLT----TTTTTTTTTTTTTS---PMNTTTTTVLINGTTTT----TVPTNETTT 227

Query: 307 SLPLS 321
           ++PL+
Sbjct: 228 TVPLN 232


>Z81134-7|CAD56602.1|  879|Caenorhabditis elegans Hypothetical
           protein T28D6.5b protein.
          Length = 879

 Score = 29.1 bits (62), Expect = 4.3
 Identities = 17/51 (33%), Positives = 25/51 (49%), Gaps = 2/51 (3%)
 Frame = +3

Query: 90  HIKMKFFMIFVLALLAMANAQVVINDRNGYEP-IDNRPY-IVNPPKDYNPN 236
           H   +  M+ +  LLA  +  +  +DR  Y P  D  PY IV P   Y+P+
Sbjct: 17  HNNSRSMMLSLFMLLAHLDPAIAGSDRRSYHPNPDAEPYGIVQPAYPYDPH 67


>Z81134-6|CAB03450.2|  795|Caenorhabditis elegans Hypothetical
           protein T28D6.5a protein.
          Length = 795

 Score = 29.1 bits (62), Expect = 4.3
 Identities = 17/51 (33%), Positives = 25/51 (49%), Gaps = 2/51 (3%)
 Frame = +3

Query: 90  HIKMKFFMIFVLALLAMANAQVVINDRNGYEP-IDNRPY-IVNPPKDYNPN 236
           H   +  M+ +  LLA  +  +  +DR  Y P  D  PY IV P   Y+P+
Sbjct: 17  HNNSRSMMLSLFMLLAHLDPAIAGSDRRSYHPNPDAEPYGIVQPAYPYDPH 67


>AL117202-32|CAD56611.1|  879|Caenorhabditis elegans Hypothetical
           protein T28D6.5b protein.
          Length = 879

 Score = 29.1 bits (62), Expect = 4.3
 Identities = 17/51 (33%), Positives = 25/51 (49%), Gaps = 2/51 (3%)
 Frame = +3

Query: 90  HIKMKFFMIFVLALLAMANAQVVINDRNGYEP-IDNRPY-IVNPPKDYNPN 236
           H   +  M+ +  LLA  +  +  +DR  Y P  D  PY IV P   Y+P+
Sbjct: 17  HNNSRSMMLSLFMLLAHLDPAIAGSDRRSYHPNPDAEPYGIVQPAYPYDPH 67


>AL117202-31|CAD56610.1|  795|Caenorhabditis elegans Hypothetical
           protein T28D6.5a protein.
          Length = 795

 Score = 29.1 bits (62), Expect = 4.3
 Identities = 17/51 (33%), Positives = 25/51 (49%), Gaps = 2/51 (3%)
 Frame = +3

Query: 90  HIKMKFFMIFVLALLAMANAQVVINDRNGYEP-IDNRPY-IVNPPKDYNPN 236
           H   +  M+ +  LLA  +  +  +DR  Y P  D  PY IV P   Y+P+
Sbjct: 17  HNNSRSMMLSLFMLLAHLDPAIAGSDRRSYHPNPDAEPYGIVQPAYPYDPH 67


>Z72504-5|CAA96602.2|  812|Caenorhabditis elegans Hypothetical
           protein C29E6.1a protein.
          Length = 812

 Score = 28.7 bits (61), Expect = 5.7
 Identities = 21/59 (35%), Positives = 28/59 (47%), Gaps = 1/59 (1%)
 Frame = +1

Query: 142 PTLKL*SMTETATNLLTTARTSLILPKITTLMETATNLSTTVHITWTLP-KADLTSSLP 315
           PT  + + T   T    T  T+   PK TT  ETAT  S+T  +T   P     T++LP
Sbjct: 496 PTTTVQTSTTVPTTPSKTTATTTTTPKPTT-TETATTSSSTTTVTTQKPTTVTSTTTLP 553


>Z72504-4|CAH60755.1|  653|Caenorhabditis elegans Hypothetical
           protein C29E6.1b protein.
          Length = 653

 Score = 28.7 bits (61), Expect = 5.7
 Identities = 21/59 (35%), Positives = 28/59 (47%), Gaps = 1/59 (1%)
 Frame = +1

Query: 142 PTLKL*SMTETATNLLTTARTSLILPKITTLMETATNLSTTVHITWTLP-KADLTSSLP 315
           PT  + + T   T    T  T+   PK TT  ETAT  S+T  +T   P     T++LP
Sbjct: 337 PTTTVQTSTTVPTTPSKTTATTTTTPKPTT-TETATTSSSTTTVTTQKPTTVTSTTTLP 394


>X91045-1|CAA62505.1|  693|Caenorhabditis elegans let-653 protein.
          Length = 693

 Score = 28.7 bits (61), Expect = 5.7
 Identities = 21/59 (35%), Positives = 28/59 (47%), Gaps = 1/59 (1%)
 Frame = +1

Query: 142 PTLKL*SMTETATNLLTTARTSLILPKITTLMETATNLSTTVHITWTLP-KADLTSSLP 315
           PT  + + T   T    T  T+   PK TT  ETAT  S+T  +T   P     T++LP
Sbjct: 377 PTTTVQTSTTVPTTPSKTTATTTTTPKPTT-TETATTSSSTTTVTTQKPTTVTSTTTLP 434


>AL022270-2|CAB63433.2|  952|Caenorhabditis elegans Hypothetical
           protein C26G2.2 protein.
          Length = 952

 Score = 28.3 bits (60), Expect = 7.6
 Identities = 18/76 (23%), Positives = 34/76 (44%)
 Frame = +1

Query: 139 WPTLKL*SMTETATNLLTTARTSLILPKITTLMETATNLSTTVHITWTLPKADLTSSLPL 318
           +PT+ +    +T T+ + +     I P++++       LSTT  +T T P    +S    
Sbjct: 412 FPTVGIPGHEQTTTSKMPSTDDDYITPEMSSTASMEITLSTTSDLTSTYPSTFTSSWSTE 471

Query: 319 SLVLAVGSKEYLRKLI 366
           S VL    ++    +I
Sbjct: 472 STVLTTQQQDTTTSVI 487


>AF100656-6|AAF99961.1|  240|Caenorhabditis elegans Hypothetical
           protein F49F1.7 protein.
          Length = 240

 Score = 28.3 bits (60), Expect = 7.6
 Identities = 19/50 (38%), Positives = 19/50 (38%)
 Frame = +1

Query: 166 TETATNLLTTARTSLILPKITTLMETATNLSTTVHITWTLPKADLTSSLP 315
           TET     TT          TT     T  STTV  T T PK   T S P
Sbjct: 159 TETTETTETTKAIKTTKTTETTKATKTTTPSTTVKTTTTKPKPPCTDSSP 208


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,251,063
Number of Sequences: 27780
Number of extensions: 294072
Number of successful extensions: 688
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 672
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 686
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2192413762
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)