Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP26_F_F13
(852 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
07_01_0799 - 6273520-6274008,6274137-6274151 32 0.67
07_03_0481 - 18572206-18574314,18574591-18575185,18575304-185753... 31 0.88
09_06_0186 + 21427739-21428813,21428894-21428977,21429136-21429254 31 1.5
03_03_0132 + 14711645-14711839,14712641-14712970,14713689-147137... 31 1.5
09_04_0727 + 19765175-19765384,19765523-19765595,19766476-197665... 30 2.0
08_02_0783 - 21166491-21166892,21167139-21167251,21168127-211682... 30 2.0
01_05_0560 - 23288078-23288370,23288448-23288733 30 2.7
12_02_1193 + 26891619-26892456,26892545-26893884 29 4.7
01_01_0206 - 1770622-1771347 29 4.7
04_04_0766 - 27923120-27923554,27923843-27924580,27924815-279248... 29 6.2
05_03_0192 - 9525945-9526210,9526305-9526539 28 8.2
03_05_0826 - 27994004-27994966,27995053-27996030,27996101-27996478 28 8.2
>07_01_0799 - 6273520-6274008,6274137-6274151
Length = 167
Score = 31.9 bits (69), Expect = 0.67
Identities = 13/32 (40%), Positives = 20/32 (62%)
Frame = -1
Query: 216 PACRAVRVIGRCVGGGTEGRLDEPLARSLSKE 121
P CR + V G+C+GGG G +DE + R ++
Sbjct: 67 PRCRTM-VKGQCIGGGAAGNVDEQVWRDCCRQ 97
>07_03_0481 - 18572206-18574314,18574591-18575185,18575304-18575371,
18577344-18577458,18578179-18578333,18578673-18580621,
18580691-18581372,18581550-18581621,18582558-18583199,
18583301-18583402,18585011-18585100
Length = 2192
Score = 31.5 bits (68), Expect = 0.88
Identities = 15/47 (31%), Positives = 23/47 (48%)
Frame = +2
Query: 254 PRAPSTADHPILPSKIDDVQLDPNRRYVRSVTNPENNEASIEHSHHT 394
P P T H I S +DD+ R VR +P+N ++ + S +T
Sbjct: 2064 PEPPETGTHRIEFSAVDDMDTGSCRSPVRDTPDPDNQKSELSGSGNT 2110
>09_06_0186 + 21427739-21428813,21428894-21428977,21429136-21429254
Length = 425
Score = 30.7 bits (66), Expect = 1.5
Identities = 17/43 (39%), Positives = 23/43 (53%)
Frame = +1
Query: 151 IQPTFSATANTAPDNTYSATSWPGTAMAVSR*QCSSCAKYCRP 279
+QP+ TAN P N S TS P ++A ++ CSS A P
Sbjct: 153 VQPSIIVTANPPPRNVVSTTSVPQNSIA-AKLACSSVAAASPP 194
>03_03_0132 +
14711645-14711839,14712641-14712970,14713689-14713751,
14713833-14713906,14714004-14714099,14714705-14714759,
14714867-14714971,14715054-14715135,14715450-14715562,
14715717-14716118
Length = 504
Score = 30.7 bits (66), Expect = 1.5
Identities = 11/28 (39%), Positives = 17/28 (60%)
Frame = -1
Query: 729 HCIFMQNY*KYHLNLSNYDSMNIGVHSE 646
HCI+ Y K HL+ S + +N+ HS+
Sbjct: 348 HCIYDGGYCKLHLSYSRHTDLNVKAHSD 375
>09_04_0727 + 19765175-19765384,19765523-19765595,19766476-19766570,
19766666-19768450,19768533-19768721,19768816-19768958,
19769075-19769320,19769975-19770059,19770117-19770191,
19770304-19770369,19770466-19770712,19770824-19771242
Length = 1210
Score = 30.3 bits (65), Expect = 2.0
Identities = 15/40 (37%), Positives = 20/40 (50%), Gaps = 1/40 (2%)
Frame = +2
Query: 479 VPTLPPFNPKPIYIDMGNRYRRHASDD-QEELRQYNEHFL 595
+P LP NP+P+ D G ASDD E+L F+
Sbjct: 1119 LPELPELNPEPMVTDNGENAAMPASDDIPEQLEVVKRRFM 1158
>08_02_0783 -
21166491-21166892,21167139-21167251,21168127-21168208,
21168298-21168416,21168471-21168528,21168954-21169016,
21169641-21169850,21171549-21171731
Length = 409
Score = 30.3 bits (65), Expect = 2.0
Identities = 11/28 (39%), Positives = 16/28 (57%)
Frame = -1
Query: 729 HCIFMQNY*KYHLNLSNYDSMNIGVHSE 646
HCI+ Y K HL+ S + +N+ H E
Sbjct: 253 HCIYDGGYCKLHLSYSRHTDLNVKAHDE 280
>01_05_0560 - 23288078-23288370,23288448-23288733
Length = 192
Score = 29.9 bits (64), Expect = 2.7
Identities = 16/31 (51%), Positives = 19/31 (61%)
Frame = +2
Query: 251 VPRAPSTADHPILPSKIDDVQLDPNRRYVRS 343
+PR P A H +L S DDV DP+ RYV S
Sbjct: 120 LPR-PLRAGHYVLSSPPDDVDHDPDHRYVFS 149
>12_02_1193 + 26891619-26892456,26892545-26893884
Length = 725
Score = 29.1 bits (62), Expect = 4.7
Identities = 22/65 (33%), Positives = 33/65 (50%), Gaps = 6/65 (9%)
Frame = +2
Query: 206 RQAGQEPLWLYQGDNVPRA-PSTADHPILPSK---IDDVQLDPNRRYV--RSVTNPENNE 367
RQA W+Y G+ PRA P AD PS+ V+L P +R V S ++ ++ +
Sbjct: 308 RQAAGRANWVYNGELPPRANPQKADDEAGPSQKRMRGQVKLAPKKRRVPPSSDSDADDED 367
Query: 368 ASIEH 382
+ EH
Sbjct: 368 DAEEH 372
>01_01_0206 - 1770622-1771347
Length = 241
Score = 29.1 bits (62), Expect = 4.7
Identities = 13/20 (65%), Positives = 15/20 (75%), Gaps = 1/20 (5%)
Frame = +2
Query: 455 LYPRGKL-PVPTLPPFNPKP 511
L+ GKL PVP LPP +PKP
Sbjct: 68 LFAGGKLLPVPPLPPVHPKP 87
>04_04_0766 -
27923120-27923554,27923843-27924580,27924815-27924874,
27925281-27925328
Length = 426
Score = 28.7 bits (61), Expect = 6.2
Identities = 18/50 (36%), Positives = 25/50 (50%)
Frame = +1
Query: 172 TANTAPDNTYSATSWPGTAMAVSR*QCSSCAKYCRPSDSSFENRRRAARS 321
T++ APD +A + + V+ SS CRPS SSF +R A S
Sbjct: 157 TSSPAPDQAPAAEATDVDDVVVAALDSSSIDGSCRPSPSSFVAWKRTADS 206
>05_03_0192 - 9525945-9526210,9526305-9526539
Length = 166
Score = 28.3 bits (60), Expect = 8.2
Identities = 36/116 (31%), Positives = 48/116 (41%), Gaps = 5/116 (4%)
Frame = -1
Query: 471 FPRGYKNRRSLVLRWLS-IGWSSPVSTV*CECSMDASLFSGLVTLRTYLRFG-SSCTSSI 298
+PR RR+L L S G+ S S C CS S L T G S TSS
Sbjct: 41 YPRCPDLRRALGLSAHSDSGFCSRASCQGCSCSGGDQTASTTAPLSTATAIGYRSDTSSA 100
Query: 297 FEGRIGWSAVLGARGTLSP*YS---HSGSWPACRAVRVIGRCVGGGTEGRLDEPLA 139
++ + V G R + P +S + +WP +AVR GG T + P A
Sbjct: 101 YQPNV---KVAGGR--VPPGWSAAYRAVTWPEYKAVRKKAFTTGGSTLEMVSTPTA 151
>03_05_0826 - 27994004-27994966,27995053-27996030,27996101-27996478
Length = 772
Score = 28.3 bits (60), Expect = 8.2
Identities = 14/43 (32%), Positives = 19/43 (44%)
Frame = +1
Query: 124 FAQASCQRFIQPTFSATANTAPDNTYSATSWPGTAMAVSR*QC 252
F +C ++ PT SA T N + +S PGT R C
Sbjct: 101 FLGTACADWVMPTSSAPRQTLSSNIHRNSSRPGTPAPSGRLLC 143
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,125,822
Number of Sequences: 37544
Number of extensions: 503242
Number of successful extensions: 1499
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 1432
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1499
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2373961368
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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