Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP26_F_F12
         (1140 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

03_05_0001 - 19386264-19386284,19386446-19386517,19386614-193873...    30   3.0  
05_03_0002 - 7278527-7279675,7279768-7280325,7280433-7280594           29   9.0  

>03_05_0001 - 19386264-19386284,19386446-19386517,19386614-19387357,
            19387454-19388884,19388953-19389118,19392035-19392114,
            19392393-19392462,19392550-19392761,19392837-19392890,
            19393471-19393623,19393715-19393930,19394029-19394248,
            19394332-19394399,19394510-19394643,19394755-19394854,
            19394943-19395421,19395506-19395699,19396270-19396355,
            19396364-19396444,19396842-19397023,19397305-19397346,
            19398247-19398558,19399374-19399434,19399435-19399617,
            19399744-19399863,19400380-19401051,19402597-19402668,
            19402742-19402865,19403563-19403651,19405023-19405097
          Length = 2170

 Score = 30.3 bits (65), Expect = 3.0
 Identities = 13/38 (34%), Positives = 19/38 (50%)
 Frame = -1

Query: 516  PLAXXVGVARGPMIFDLRXSLSTXEPRRPGSPRPDPHP 403
            PL   +       + + + SLS+ +PR P  P P PHP
Sbjct: 2024 PLQIQLSSGLAQSVSNPQPSLSSMQPRAPPPPPPQPHP 2061


>05_03_0002 - 7278527-7279675,7279768-7280325,7280433-7280594
          Length = 622

 Score = 28.7 bits (61), Expect = 9.0
 Identities = 12/27 (44%), Positives = 15/27 (55%)
 Frame = -1

Query: 456 LSTXEPRRPGSPRPDPHPXTXS*TRCP 376
           ++   PR   SPRP PHP T +  R P
Sbjct: 30  VTAPSPRSQPSPRPLPHPNTPTRPRAP 56


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,642,833
Number of Sequences: 37544
Number of extensions: 224006
Number of successful extensions: 361
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 347
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 360
length of database: 14,793,348
effective HSP length: 83
effective length of database: 11,677,196
effective search space used: 3456450016
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)