SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP26_F_F11
         (920 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF313909-1|AAL99382.1| 1024|Anopheles gambiae collagen IV alpha ...    30   0.11 
DQ370037-1|ABD18598.1|  121|Anopheles gambiae putative TIL domai...    27   0.80 
AY578805-1|AAT07310.1|  753|Anopheles gambiae medea protein.           24   5.6  
AF008575-1|AAB87764.1|  525|Anopheles gambiae chitinase protein.       24   5.6  
X95912-1|CAA65156.1|  696|Anopheles gambiae immune factor protein.     23   9.8  
DQ370045-1|ABD18606.1|  285|Anopheles gambiae putative TIL domai...    23   9.8  
DQ370040-1|ABD18601.1|  121|Anopheles gambiae putative TIL domai...    23   9.8  

>AF313909-1|AAL99382.1| 1024|Anopheles gambiae collagen IV alpha 1
           chain protein.
          Length = 1024

 Score = 29.9 bits (64), Expect = 0.11
 Identities = 14/29 (48%), Positives = 15/29 (51%)
 Frame = +1

Query: 289 GARQCDGVRADVGCAHEPGRDAGCRAAGP 375
           GAR   G+R DVG    PGRD      GP
Sbjct: 758 GARGLQGLRGDVGPEGRPGRDGAPGLPGP 786


>DQ370037-1|ABD18598.1|  121|Anopheles gambiae putative TIL domain
           polypeptide protein.
          Length = 121

 Score = 27.1 bits (57), Expect = 0.80
 Identities = 16/55 (29%), Positives = 24/55 (43%), Gaps = 3/55 (5%)
 Frame = -2

Query: 226 HGADAEPHEERRGQQLGDQRSPPS--HCTQPDKPARRIF-VCGRACGARACVSVR 71
           HG       E    +  ++ SPP    CT P    R ++  CG +C  R C ++R
Sbjct: 31  HGETVPATPEPSTTEATEEESPPPKIECTDP----REVYNECGSSCDDRTCENIR 81


>AY578805-1|AAT07310.1|  753|Anopheles gambiae medea protein.
          Length = 753

 Score = 24.2 bits (50), Expect = 5.6
 Identities = 10/23 (43%), Positives = 14/23 (60%)
 Frame = +2

Query: 320 TSGAHMNPAVTLAAALQGRMSPA 388
           T+GAH +  VT+   L GR+  A
Sbjct: 62  TNGAHPSKCVTIQRTLDGRLQVA 84


>AF008575-1|AAB87764.1|  525|Anopheles gambiae chitinase protein.
          Length = 525

 Score = 24.2 bits (50), Expect = 5.6
 Identities = 18/55 (32%), Positives = 23/55 (41%), Gaps = 1/55 (1%)
 Frame = -3

Query: 297 PSTTN-PKAKAGCDSTTASFPLYGTTELTPSHTRNAVASSSETSARHHRTAPSRT 136
           PSTT  P + A   ST A     GTT  TP+           + A +H T  + T
Sbjct: 404 PSTTTMPPSVAPTTSTVAP----GTTTTTPTGANPGTTQPPTSDAPNHTTTSTTT 454


>X95912-1|CAA65156.1|  696|Anopheles gambiae immune factor protein.
          Length = 696

 Score = 23.4 bits (48), Expect = 9.8
 Identities = 11/33 (33%), Positives = 14/33 (42%)
 Frame = -3

Query: 294 STTNPKAKAGCDSTTASFPLYGTTELTPSHTRN 196
           + T P A      T    P  G  +  PSHT+N
Sbjct: 501 AATQPNASVPMFETNLPGPSNGWVQPVPSHTQN 533


>DQ370045-1|ABD18606.1|  285|Anopheles gambiae putative TIL domain
           protein protein.
          Length = 285

 Score = 23.4 bits (48), Expect = 9.8
 Identities = 8/27 (29%), Positives = 12/27 (44%)
 Frame = -2

Query: 157 SHCTQPDKPARRIFVCGRACGARACVS 77
           S C     P   ++ C   C  +AC+S
Sbjct: 19  SRCVHRRCPKNEVYSCCAPCPQKACIS 45


>DQ370040-1|ABD18601.1|  121|Anopheles gambiae putative TIL domain
           polypeptide protein.
          Length = 121

 Score = 23.4 bits (48), Expect = 9.8
 Identities = 8/14 (57%), Positives = 9/14 (64%)
 Frame = -2

Query: 112 CGRACGARACVSVR 71
           CG ACG R C + R
Sbjct: 70  CGPACGDRTCTNQR 83


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 716,036
Number of Sequences: 2352
Number of extensions: 12995
Number of successful extensions: 39
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 35
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 38
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 100055142
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

- SilkBase 1999-2023 -