BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP26_F_F11
(920 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF313909-1|AAL99382.1| 1024|Anopheles gambiae collagen IV alpha ... 30 0.11
DQ370037-1|ABD18598.1| 121|Anopheles gambiae putative TIL domai... 27 0.80
AY578805-1|AAT07310.1| 753|Anopheles gambiae medea protein. 24 5.6
AF008575-1|AAB87764.1| 525|Anopheles gambiae chitinase protein. 24 5.6
X95912-1|CAA65156.1| 696|Anopheles gambiae immune factor protein. 23 9.8
DQ370045-1|ABD18606.1| 285|Anopheles gambiae putative TIL domai... 23 9.8
DQ370040-1|ABD18601.1| 121|Anopheles gambiae putative TIL domai... 23 9.8
>AF313909-1|AAL99382.1| 1024|Anopheles gambiae collagen IV alpha 1
chain protein.
Length = 1024
Score = 29.9 bits (64), Expect = 0.11
Identities = 14/29 (48%), Positives = 15/29 (51%)
Frame = +1
Query: 289 GARQCDGVRADVGCAHEPGRDAGCRAAGP 375
GAR G+R DVG PGRD GP
Sbjct: 758 GARGLQGLRGDVGPEGRPGRDGAPGLPGP 786
>DQ370037-1|ABD18598.1| 121|Anopheles gambiae putative TIL domain
polypeptide protein.
Length = 121
Score = 27.1 bits (57), Expect = 0.80
Identities = 16/55 (29%), Positives = 24/55 (43%), Gaps = 3/55 (5%)
Frame = -2
Query: 226 HGADAEPHEERRGQQLGDQRSPPS--HCTQPDKPARRIF-VCGRACGARACVSVR 71
HG E + ++ SPP CT P R ++ CG +C R C ++R
Sbjct: 31 HGETVPATPEPSTTEATEEESPPPKIECTDP----REVYNECGSSCDDRTCENIR 81
>AY578805-1|AAT07310.1| 753|Anopheles gambiae medea protein.
Length = 753
Score = 24.2 bits (50), Expect = 5.6
Identities = 10/23 (43%), Positives = 14/23 (60%)
Frame = +2
Query: 320 TSGAHMNPAVTLAAALQGRMSPA 388
T+GAH + VT+ L GR+ A
Sbjct: 62 TNGAHPSKCVTIQRTLDGRLQVA 84
>AF008575-1|AAB87764.1| 525|Anopheles gambiae chitinase protein.
Length = 525
Score = 24.2 bits (50), Expect = 5.6
Identities = 18/55 (32%), Positives = 23/55 (41%), Gaps = 1/55 (1%)
Frame = -3
Query: 297 PSTTN-PKAKAGCDSTTASFPLYGTTELTPSHTRNAVASSSETSARHHRTAPSRT 136
PSTT P + A ST A GTT TP+ + A +H T + T
Sbjct: 404 PSTTTMPPSVAPTTSTVAP----GTTTTTPTGANPGTTQPPTSDAPNHTTTSTTT 454
>X95912-1|CAA65156.1| 696|Anopheles gambiae immune factor protein.
Length = 696
Score = 23.4 bits (48), Expect = 9.8
Identities = 11/33 (33%), Positives = 14/33 (42%)
Frame = -3
Query: 294 STTNPKAKAGCDSTTASFPLYGTTELTPSHTRN 196
+ T P A T P G + PSHT+N
Sbjct: 501 AATQPNASVPMFETNLPGPSNGWVQPVPSHTQN 533
>DQ370045-1|ABD18606.1| 285|Anopheles gambiae putative TIL domain
protein protein.
Length = 285
Score = 23.4 bits (48), Expect = 9.8
Identities = 8/27 (29%), Positives = 12/27 (44%)
Frame = -2
Query: 157 SHCTQPDKPARRIFVCGRACGARACVS 77
S C P ++ C C +AC+S
Sbjct: 19 SRCVHRRCPKNEVYSCCAPCPQKACIS 45
>DQ370040-1|ABD18601.1| 121|Anopheles gambiae putative TIL domain
polypeptide protein.
Length = 121
Score = 23.4 bits (48), Expect = 9.8
Identities = 8/14 (57%), Positives = 9/14 (64%)
Frame = -2
Query: 112 CGRACGARACVSVR 71
CG ACG R C + R
Sbjct: 70 CGPACGDRTCTNQR 83
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 716,036
Number of Sequences: 2352
Number of extensions: 12995
Number of successful extensions: 39
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 35
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 38
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 100055142
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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