BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP26_F_F10
(912 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF313909-1|AAL99382.1| 1024|Anopheles gambiae collagen IV alpha ... 28 0.45
AJ130951-1|CAA10260.1| 189|Anopheles gambiae SG3 protein protein. 26 1.4
DQ655702-1|ABG45862.1| 889|Anopheles gambiae Jxc1 protein. 25 2.4
AY785361-1|AAV52865.1| 960|Anopheles gambiae male-specific tran... 25 3.2
AJ438610-1|CAD27473.1| 838|Anopheles gambiae putative microtubu... 25 3.2
AJ439060-3|CAD27754.1| 1645|Anopheles gambiae hypothetical prote... 24 5.6
EU068741-1|ABU40241.1| 993|Anopheles gambiae anion exchanger pr... 24 7.4
DQ303468-1|ABC18327.1| 1115|Anopheles gambiae putative methopren... 24 7.4
AJ438610-4|CAD27476.1| 593|Anopheles gambiae putative transcrip... 24 7.4
AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative different... 23 9.7
>AF313909-1|AAL99382.1| 1024|Anopheles gambiae collagen IV alpha 1
chain protein.
Length = 1024
Score = 27.9 bits (59), Expect = 0.45
Identities = 19/57 (33%), Positives = 23/57 (40%), Gaps = 1/57 (1%)
Frame = +3
Query: 597 GNPVXPXTGGYPGKXXXTXXP-PKGRDPEKGPXGXRFXXRPRPPXRASQKXAPPXXG 764
G+P P + GYPG+ P P G + GP G P P A AP G
Sbjct: 128 GDPGLPGSLGYPGEKGDLGTPGPPGYPGDVGPKG-----EPGPKGPAGHPGAPGRPG 179
>AJ130951-1|CAA10260.1| 189|Anopheles gambiae SG3 protein protein.
Length = 189
Score = 26.2 bits (55), Expect = 1.4
Identities = 12/28 (42%), Positives = 12/28 (42%), Gaps = 1/28 (3%)
Frame = +1
Query: 475 GXXXPPGXGGWXX-GXPPVPPPXXPXPP 555
G PG W G PP PP P PP
Sbjct: 74 GIFGRPGRPWWSVPGIPPFRPPWHPRPP 101
>DQ655702-1|ABG45862.1| 889|Anopheles gambiae Jxc1 protein.
Length = 889
Score = 25.4 bits (53), Expect = 2.4
Identities = 18/65 (27%), Positives = 20/65 (30%)
Frame = +2
Query: 545 PXPRPSGGGXXXXPPQGXXSGXPXNRGIPREXPXDXXAXKGPGPXKRAXWXAXXPXAPPP 724
P P P GG PPQ P N P + + P P PPP
Sbjct: 531 PPPPPPGGAVLNIPPQ--FLPPPLNLLRAPFFPLNPAQLRFPAGFPNLPNAQPPPAPPPP 588
Query: 725 XPSXP 739
P P
Sbjct: 589 PPMGP 593
Score = 25.4 bits (53), Expect = 2.4
Identities = 11/23 (47%), Positives = 12/23 (52%)
Frame = +1
Query: 520 PPVPPPXXPXPPAVRXGGXXXAP 588
PP PPP P PP+ GG P
Sbjct: 585 PPPPPPMGP-PPSPLAGGPLGGP 606
>AY785361-1|AAV52865.1| 960|Anopheles gambiae male-specific
transcription factor FRU-MA protein.
Length = 960
Score = 25.0 bits (52), Expect = 3.2
Identities = 13/36 (36%), Positives = 13/36 (36%)
Frame = -2
Query: 593 LGGAXXXPPXRTAGGXGXXGGGTGGXPXXQPPXPGG 486
LGG GG G GG GG P GG
Sbjct: 671 LGGGAVGGGSGAGGGAGSSGGSGGGLASGSPYGGGG 706
Score = 24.2 bits (50), Expect = 5.6
Identities = 13/35 (37%), Positives = 16/35 (45%)
Frame = -2
Query: 590 GGAXXXPPXRTAGGXGXXGGGTGGXPXXQPPXPGG 486
GG+ RT G G GGG+ G P + GG
Sbjct: 521 GGSGCVNGSRTVGAGGMAGGGSDG-PEYEGAGRGG 554
>AJ438610-1|CAD27473.1| 838|Anopheles gambiae putative microtubule
binding protein protein.
Length = 838
Score = 25.0 bits (52), Expect = 3.2
Identities = 19/63 (30%), Positives = 20/63 (31%)
Frame = +1
Query: 475 GXXXPPGXGGWXXGXPPVPPPXXPXPPAVRXGGXXXAPPRXXIRXXPEPGDTPGXTXXPX 654
G PP G PP P P PP V P R + PG PG P
Sbjct: 196 GNVGPPRTGTPTQPQPPRPGGMYPQPPGV------PMPMRPQMPPGAVPGMQPGMQPRPP 249
Query: 655 GXQ 663
Q
Sbjct: 250 SAQ 252
Score = 24.6 bits (51), Expect = 4.2
Identities = 21/81 (25%), Positives = 24/81 (29%), Gaps = 3/81 (3%)
Frame = +1
Query: 520 PPVPPPXXPXPPAVRXGGXXXAPPRXXIRXXPEPGDTPGXTXXPXGXQRAGTXK--KGXV 693
P P P P P + PPR P+P G P G + G V
Sbjct: 178 PARPNPGMPPGPQMMRPPGNVGPPRTGTPTQPQPPRPGGMYPQPPGVPMPMRPQMPPGAV 237
Query: 694 AGXXP-XGPAPXXEXPKNXPP 753
G P P P PP
Sbjct: 238 PGMQPGMQPRPPSAQGMQRPP 258
>AJ439060-3|CAD27754.1| 1645|Anopheles gambiae hypothetical protein
protein.
Length = 1645
Score = 24.2 bits (50), Expect = 5.6
Identities = 10/22 (45%), Positives = 11/22 (50%)
Frame = -2
Query: 587 GAXXXPPXRTAGGXGXXGGGTG 522
G P + AGG G GGG G
Sbjct: 1484 GGYGGSPTKGAGGGGGGGGGKG 1505
>EU068741-1|ABU40241.1| 993|Anopheles gambiae anion exchanger
protein.
Length = 993
Score = 23.8 bits (49), Expect = 7.4
Identities = 11/21 (52%), Positives = 12/21 (57%)
Frame = -2
Query: 560 TAGGXGXXGGGTGGXPXXQPP 498
T GG G GGG GG +PP
Sbjct: 392 TVGGGG--GGGDGGSDGKKPP 410
>DQ303468-1|ABC18327.1| 1115|Anopheles gambiae putative
methoprene-tolerant protein protein.
Length = 1115
Score = 23.8 bits (49), Expect = 7.4
Identities = 10/20 (50%), Positives = 12/20 (60%)
Frame = +1
Query: 514 GXPPVPPPXXPXPPAVRXGG 573
G PP PPP P P ++ GG
Sbjct: 781 GSPPPPPP--PPPSSLSPGG 798
>AJ438610-4|CAD27476.1| 593|Anopheles gambiae putative
transcription factor protein.
Length = 593
Score = 23.8 bits (49), Expect = 7.4
Identities = 11/19 (57%), Positives = 11/19 (57%)
Frame = -2
Query: 569 PXRTAGGXGXXGGGTGGXP 513
P R GG G GGG GG P
Sbjct: 10 PLRAGGGGG--GGGGGGGP 26
>AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative
differentiation regulator protein.
Length = 1283
Score = 23.4 bits (48), Expect = 9.7
Identities = 13/35 (37%), Positives = 16/35 (45%)
Frame = -2
Query: 623 PGSGXNRIXXLGGAXXXPPXRTAGGXGXXGGGTGG 519
PG+G GG ++GG G GGG GG
Sbjct: 200 PGAGGG---GSGGGAPGGGGGSSGGPGPGGGGGGG 231
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 581,255
Number of Sequences: 2352
Number of extensions: 10625
Number of successful extensions: 79
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 25
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 69
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 98814789
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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