Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP26_F_F10
(912 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z68301-5|CAA92620.1| 301|Caenorhabditis elegans Hypothetical pr... 40 0.003
V00148-1|CAA23464.1| 301|Caenorhabditis elegans protein ( Caeno... 40 0.003
J01048-1|AAA27990.1| 301|Caenorhabditis elegans protein ( C.ele... 40 0.003
AY347575-1|AAP97869.1| 301|Caenorhabditis elegans COLlagen stru... 40 0.003
AF022985-9|AAB69960.1| 314|Caenorhabditis elegans Collagen prot... 37 0.017
U80451-8|AAB37842.2| 288|Caenorhabditis elegans Collagen protei... 36 0.030
AF000298-11|AAM97960.1| 518|Caenorhabditis elegans Prion-like-(... 36 0.040
AF000298-10|AAM97961.1| 539|Caenorhabditis elegans Prion-like-(... 36 0.040
AF000298-8|AAC48255.2| 524|Caenorhabditis elegans Prion-like-(q... 36 0.040
Z67990-1|CAA91932.1| 316|Caenorhabditis elegans Hypothetical pr... 36 0.053
Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical pr... 36 0.053
U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA bi... 36 0.053
Z81479-3|CAB03942.1| 283|Caenorhabditis elegans Hypothetical pr... 34 0.12
Z81479-2|CAB03941.1| 283|Caenorhabditis elegans Hypothetical pr... 34 0.12
AC025721-11|AAK29900.1| 78|Caenorhabditis elegans Hypothetical... 34 0.16
AF022985-10|AAB69961.1| 325|Caenorhabditis elegans Collagen pro... 33 0.21
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 33 0.28
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 33 0.28
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 33 0.28
Z12018-1|CAD88219.2| 774|Caenorhabditis elegans Hypothetical pr... 33 0.37
Z11126-8|CAD88221.2| 774|Caenorhabditis elegans Hypothetical pr... 33 0.37
U88314-13|ABR92611.1| 1346|Caenorhabditis elegans Formin homolog... 33 0.37
AB084086-1|BAC67013.1| 1346|Caenorhabditis elegans Formactin pro... 33 0.37
Z81503-1|CAB04111.1| 305|Caenorhabditis elegans Hypothetical pr... 32 0.49
AF047656-13|AAC05105.1| 313|Caenorhabditis elegans Collagen pro... 32 0.49
Z70756-6|CAA94792.1| 290|Caenorhabditis elegans Hypothetical pr... 32 0.65
Z68219-2|CAA92476.1| 300|Caenorhabditis elegans Hypothetical pr... 31 0.86
U58751-5|AAN84882.1| 781|Caenorhabditis elegans Wasp (actin cyt... 31 1.1
U58751-4|AAN84881.1| 607|Caenorhabditis elegans Wasp (actin cyt... 31 1.1
U53155-5|AAC48270.1| 303|Caenorhabditis elegans Collagen protei... 31 1.1
AF101312-1|AAC69221.3| 813|Caenorhabditis elegans Hypothetical ... 31 1.1
AB072926-1|BAB69889.1| 303|Caenorhabditis elegans collagen prot... 31 1.1
Z27078-7|CAE52901.2| 1502|Caenorhabditis elegans Hypothetical pr... 31 1.5
Z27078-6|CAA81584.4| 1759|Caenorhabditis elegans Hypothetical pr... 31 1.5
X56979-1|CAA40299.1| 1758|Caenorhabditis elegans alpha1(IV) coll... 31 1.5
U41557-6|AAA83307.1| 589|Caenorhabditis elegans Collagen sequen... 31 1.5
AF022985-12|AAB69959.1| 319|Caenorhabditis elegans Collagen pro... 31 1.5
AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical ... 31 1.5
AF003139-6|AAB54156.1| 327|Caenorhabditis elegans Collagen prot... 31 1.5
Z81472-1|CAB03889.1| 173|Caenorhabditis elegans Hypothetical pr... 30 2.0
Z79596-1|CAB01857.1| 830|Caenorhabditis elegans Hypothetical pr... 30 2.0
Z74036-2|CAA98487.1| 266|Caenorhabditis elegans Hypothetical pr... 30 2.0
Z74036-1|CAA98486.1| 299|Caenorhabditis elegans Hypothetical pr... 30 2.0
Z70756-4|CAA94788.1| 290|Caenorhabditis elegans Hypothetical pr... 30 2.0
L29031-1|AAB72228.2| 830|Caenorhabditis elegans dynamin protein. 30 2.0
Z73425-2|CAA97788.1| 1126|Caenorhabditis elegans Hypothetical pr... 30 2.6
AF098501-3|AAM69106.1| 275|Caenorhabditis elegans Hypothetical ... 30 2.6
AF098501-2|AAM69105.1| 298|Caenorhabditis elegans Hypothetical ... 30 2.6
AF098501-1|AAC67404.2| 548|Caenorhabditis elegans Hypothetical ... 30 2.6
AF000198-8|AAP68908.1| 435|Caenorhabditis elegans Collagen prot... 30 2.6
AC024847-11|AAO21416.1| 453|Caenorhabditis elegans Ground-like ... 30 2.6
AC024847-10|AAF60859.1| 393|Caenorhabditis elegans Ground-like ... 30 2.6
AC024809-7|AAF59540.1| 315|Caenorhabditis elegans Hypothetical ... 30 2.6
Z81592-1|CAB04725.1| 695|Caenorhabditis elegans Hypothetical pr... 29 3.5
Z81124-1|CAB03369.1| 312|Caenorhabditis elegans Hypothetical pr... 29 3.5
Z74472-4|CAA98942.1| 301|Caenorhabditis elegans Hypothetical pr... 29 3.5
Z70208-2|CAA94136.1| 304|Caenorhabditis elegans Hypothetical pr... 29 3.5
Z68335-1|CAA92729.1| 299|Caenorhabditis elegans Hypothetical pr... 29 3.5
Z54238-1|CAA90992.2| 281|Caenorhabditis elegans Hypothetical pr... 29 3.5
V00147-1|CAA23463.1| 296|Caenorhabditis elegans protein ( Caeno... 29 3.5
U58736-1|AAB00598.1| 302|Caenorhabditis elegans Dumpy : shorter... 29 3.5
J01047-1|AAA27988.1| 296|Caenorhabditis elegans protein ( C.ele... 29 3.5
AL132860-21|CAB60518.2| 759|Caenorhabditis elegans Hypothetical... 29 3.5
AF057032-1|AAC13567.1| 759|Caenorhabditis elegans DNA topoisome... 29 3.5
Z78013-1|CAB01425.3| 1140|Caenorhabditis elegans Hypothetical pr... 24 3.8
Z49069-2|CAA88865.1| 333|Caenorhabditis elegans Hypothetical pr... 29 4.6
J05067-1|AAB59179.1| 313|Caenorhabditis elegans clb-2 protein. 29 4.6
AF098500-3|ABD94103.1| 774|Caenorhabditis elegans Temporarily a... 29 4.6
AF098500-2|AAC67399.2| 996|Caenorhabditis elegans Temporarily a... 29 4.6
Z98866-26|CAM33505.1| 559|Caenorhabditis elegans Hypothetical p... 29 6.1
U80451-9|AAB37843.1| 285|Caenorhabditis elegans Collagen protei... 29 6.1
U61948-2|AAB03143.2| 345|Caenorhabditis elegans Collagen protei... 29 6.1
U10438-9|AAU87834.1| 616|Caenorhabditis elegans Hypothetical pr... 29 6.1
M25480-1|AAA27986.1| 326|Caenorhabditis elegans collagen protein. 29 6.1
AL033514-8|CAA22097.2| 715|Caenorhabditis elegans Hypothetical ... 29 6.1
Z81053-1|CAB02877.1| 385|Caenorhabditis elegans Hypothetical pr... 28 8.1
Z77662-15|CAI79240.1| 255|Caenorhabditis elegans Hypothetical p... 28 8.1
Z70284-9|CAA94280.1| 290|Caenorhabditis elegans Hypothetical pr... 28 8.1
U55366-4|AAA97982.1| 310|Caenorhabditis elegans Collagen protei... 28 8.1
U41557-2|AAA83301.1| 309|Caenorhabditis elegans Hypothetical pr... 28 8.1
U39666-1|AAA80412.2| 644|Caenorhabditis elegans Nematode astaci... 28 8.1
U23172-13|ABH03527.1| 282|Caenorhabditis elegans Hypothetical p... 28 8.1
U23172-12|ABH03526.1| 562|Caenorhabditis elegans Hypothetical p... 28 8.1
AF039052-9|AAF98625.1| 302|Caenorhabditis elegans Hypothetical ... 28 8.1
AC024798-8|AAK29921.3| 1115|Caenorhabditis elegans Hypothetical ... 28 8.1
>Z68301-5|CAA92620.1| 301|Caenorhabditis elegans Hypothetical
protein W01B6.7 protein.
Length = 301
Score = 39.5 bits (88), Expect = 0.003
Identities = 29/106 (27%), Positives = 33/106 (31%), Gaps = 2/106 (1%)
Frame = +1
Query: 487 PPGXGGWXXGXPPVPPPXXPXPPAVRXGGXXXAPP--RXXIRXXPEPGDTPGXTXXPXGX 660
PPG G P P P PA G PP PG PG P
Sbjct: 154 PPGPAGPAGPPGPPGPDGNPGSPAGPSGPGPAGPPGPAGPAGNDGAPG-APGGPGEPGAS 212
Query: 661 QRAGTXKKGXVAGXXPXGPAPXXEXPKNXPPXXXGXRTPXGLXXIP 798
++ G + G P GPA P P G + P G P
Sbjct: 213 EQGGPGEPGPAGPPGPAGPAGNDGAPGTGGPGPAGPKGPPGAAGAP 258
Score = 28.7 bits (61), Expect = 6.1
Identities = 12/23 (52%), Positives = 12/23 (52%)
Frame = -2
Query: 554 GGXGXXGGGTGGXPXXQPPXPGG 486
GG G GGG G PP PGG
Sbjct: 89 GGGGGGGGGCDGCCNPGPPGPGG 111
Score = 28.7 bits (61), Expect = 6.1
Identities = 29/110 (26%), Positives = 30/110 (27%), Gaps = 7/110 (6%)
Frame = +1
Query: 475 GXXXPPGXGGWXXGXPPVPPPXXPXPPAVRXGGXXXAPPRXXIRXXPEPGDTPGXTXXPX 654
G PG G P PP P P PP P P PG P
Sbjct: 126 GAPGNPGKGASAPCEPVTQPPCQPCPGGPPGPAGPAGPP-----GPPGPDGNPGSPAGPS 180
Query: 655 GXQRAGTXKKGXVAG-----XXPXGPAPXXEXPKNXP--PXXXGXRTPXG 783
G AG AG P GP + P P G P G
Sbjct: 181 GPGPAGPPGPAGPAGNDGAPGAPGGPGEPGASEQGGPGEPGPAGPPGPAG 230
>V00148-1|CAA23464.1| 301|Caenorhabditis elegans protein (
Caenorhabditis elegansgene Col-2 coding for a collagen.
).
Length = 301
Score = 39.5 bits (88), Expect = 0.003
Identities = 29/106 (27%), Positives = 33/106 (31%), Gaps = 2/106 (1%)
Frame = +1
Query: 487 PPGXGGWXXGXPPVPPPXXPXPPAVRXGGXXXAPP--RXXIRXXPEPGDTPGXTXXPXGX 660
PPG G P P P PA G PP PG PG P
Sbjct: 154 PPGPAGPAGPPGPPGPDGNPGSPAGPSGPGPAGPPGPAGPAGNDGAPG-APGGPGEPGAS 212
Query: 661 QRAGTXKKGXVAGXXPXGPAPXXEXPKNXPPXXXGXRTPXGLXXIP 798
++ G + G P GPA P P G + P G P
Sbjct: 213 EQGGPGEPGPAGPPGPAGPAGNDGAPGTGGPGPAGPKGPPGAAGAP 258
Score = 28.7 bits (61), Expect = 6.1
Identities = 12/23 (52%), Positives = 12/23 (52%)
Frame = -2
Query: 554 GGXGXXGGGTGGXPXXQPPXPGG 486
GG G GGG G PP PGG
Sbjct: 89 GGGGGGGGGCDGCCNPGPPGPGG 111
Score = 28.7 bits (61), Expect = 6.1
Identities = 29/110 (26%), Positives = 30/110 (27%), Gaps = 7/110 (6%)
Frame = +1
Query: 475 GXXXPPGXGGWXXGXPPVPPPXXPXPPAVRXGGXXXAPPRXXIRXXPEPGDTPGXTXXPX 654
G PG G P PP P P PP P P PG P
Sbjct: 126 GAPGNPGKGASAPCEPVTQPPCQPCPGGPPGPAGPAGPP-----GPPGPDGNPGSPAGPS 180
Query: 655 GXQRAGTXKKGXVAG-----XXPXGPAPXXEXPKNXP--PXXXGXRTPXG 783
G AG AG P GP + P P G P G
Sbjct: 181 GPGPAGPPGPAGPAGNDGAPGAPGGPGEPGASEQGGPGEPGPAGPPGPAG 230
>J01048-1|AAA27990.1| 301|Caenorhabditis elegans protein (
C.elegans (nematode)collagen 2 (col-2) gene, complete
cds. ).
Length = 301
Score = 39.5 bits (88), Expect = 0.003
Identities = 29/106 (27%), Positives = 33/106 (31%), Gaps = 2/106 (1%)
Frame = +1
Query: 487 PPGXGGWXXGXPPVPPPXXPXPPAVRXGGXXXAPP--RXXIRXXPEPGDTPGXTXXPXGX 660
PPG G P P P PA G PP PG PG P
Sbjct: 154 PPGPAGPAGPPGPPGPDGNPGSPAGPSGPGPAGPPGPAGPAGNDGAPG-APGGPGEPGAS 212
Query: 661 QRAGTXKKGXVAGXXPXGPAPXXEXPKNXPPXXXGXRTPXGLXXIP 798
++ G + G P GPA P P G + P G P
Sbjct: 213 EQGGPGEPGPAGPPGPAGPAGNDGAPGTGGPGPAGPKGPPGAAGAP 258
Score = 28.7 bits (61), Expect = 6.1
Identities = 12/23 (52%), Positives = 12/23 (52%)
Frame = -2
Query: 554 GGXGXXGGGTGGXPXXQPPXPGG 486
GG G GGG G PP PGG
Sbjct: 89 GGGGGGGGGCDGCCNPGPPGPGG 111
Score = 28.7 bits (61), Expect = 6.1
Identities = 29/110 (26%), Positives = 30/110 (27%), Gaps = 7/110 (6%)
Frame = +1
Query: 475 GXXXPPGXGGWXXGXPPVPPPXXPXPPAVRXGGXXXAPPRXXIRXXPEPGDTPGXTXXPX 654
G PG G P PP P P PP P P PG P
Sbjct: 126 GAPGNPGKGASAPCEPVTQPPCQPCPGGPPGPAGPAGPP-----GPPGPDGNPGSPAGPS 180
Query: 655 GXQRAGTXKKGXVAG-----XXPXGPAPXXEXPKNXP--PXXXGXRTPXG 783
G AG AG P GP + P P G P G
Sbjct: 181 GPGPAGPPGPAGPAGNDGAPGAPGGPGEPGASEQGGPGEPGPAGPPGPAG 230
>AY347575-1|AAP97869.1| 301|Caenorhabditis elegans COLlagen
structural gene, probabledorsal and ventral cuticle
component, from embryo to adult,but maximal in dauer
(28.0 kD) (col-2) protein.
Length = 301
Score = 39.5 bits (88), Expect = 0.003
Identities = 29/106 (27%), Positives = 33/106 (31%), Gaps = 2/106 (1%)
Frame = +1
Query: 487 PPGXGGWXXGXPPVPPPXXPXPPAVRXGGXXXAPP--RXXIRXXPEPGDTPGXTXXPXGX 660
PPG G P P P PA G PP PG PG P
Sbjct: 154 PPGPAGPAGPPGPPGPDGNPGSPAGPSGPGPAGPPGPAGPAGNDGAPG-APGGPGEPGAS 212
Query: 661 QRAGTXKKGXVAGXXPXGPAPXXEXPKNXPPXXXGXRTPXGLXXIP 798
++ G + G P GPA P P G + P G P
Sbjct: 213 EQGGPGEPGPAGPPGPAGPAGNDGAPGTGGPGPAGPKGPPGAAGAP 258
Score = 28.7 bits (61), Expect = 6.1
Identities = 12/23 (52%), Positives = 12/23 (52%)
Frame = -2
Query: 554 GGXGXXGGGTGGXPXXQPPXPGG 486
GG G GGG G PP PGG
Sbjct: 89 GGGGGGGGGCDGCCNPGPPGPGG 111
Score = 28.7 bits (61), Expect = 6.1
Identities = 29/110 (26%), Positives = 30/110 (27%), Gaps = 7/110 (6%)
Frame = +1
Query: 475 GXXXPPGXGGWXXGXPPVPPPXXPXPPAVRXGGXXXAPPRXXIRXXPEPGDTPGXTXXPX 654
G PG G P PP P P PP P P PG P
Sbjct: 126 GAPGNPGKGASAPCEPVTQPPCQPCPGGPPGPAGPAGPP-----GPPGPDGNPGSPAGPS 180
Query: 655 GXQRAGTXKKGXVAG-----XXPXGPAPXXEXPKNXP--PXXXGXRTPXG 783
G AG AG P GP + P P G P G
Sbjct: 181 GPGPAGPPGPAGPAGNDGAPGAPGGPGEPGASEQGGPGEPGPAGPPGPAG 230
>AF022985-9|AAB69960.1| 314|Caenorhabditis elegans Collagen protein
141 protein.
Length = 314
Score = 37.1 bits (82), Expect = 0.017
Identities = 31/89 (34%), Positives = 32/89 (35%), Gaps = 1/89 (1%)
Frame = -2
Query: 737 GXSXXGAGPXGKXPATXPFFXVPALWXPXGXXVFPGVSPGSGXNRIXXLGGAXXXP-PXR 561
G G GP P T P A P G PG +PG G R L G P P
Sbjct: 165 GQDSFGGGPGPAGP-TGPTGDAGAPGQP-GHPGSPG-NPGRGGQRSRGLPGPSGRPGPQG 221
Query: 560 TAGGXGXXGGGTGGXPXXQPPXPGGXXXP 474
AGG G G G QP PG P
Sbjct: 222 PAGGPGQPGQSGGSGTPGQPGAPGAPGHP 250
>U80451-8|AAB37842.2| 288|Caenorhabditis elegans Collagen protein
20 protein.
Length = 288
Score = 36.3 bits (80), Expect = 0.030
Identities = 30/99 (30%), Positives = 32/99 (32%), Gaps = 6/99 (6%)
Frame = +1
Query: 472 KGXXXPPGXGGWXX----GXPPVPP-PXXPXPPAVRXGGXXXAPPRXXIRXXPEPGDTPG 636
KG PPG G G P PP P P A GG +R P P PG
Sbjct: 158 KGPPGPPGGHGEPGPAGRGGPRGPPGPGGPQGEAGEDGGAGNPGTPGQVRSLPSPPGEPG 217
Query: 637 XTXXPXGXQRAGT-XKKGXVAGXXPXGPAPXXEXPKNXP 750
P G G + G P GP P P P
Sbjct: 218 QPGEPGGPGEPGADGRPGHPGRAGPPGP-PGDNGPNGEP 255
>AF000298-11|AAM97960.1| 518|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform b protein.
Length = 518
Score = 35.9 bits (79), Expect = 0.040
Identities = 27/97 (27%), Positives = 28/97 (28%), Gaps = 2/97 (2%)
Frame = +1
Query: 514 GXPPVPPPXXPXPPAVRXGGXXXAPPRXXIRXXPEPGDTPGXTXXPXGXQRAGTXKKGXV 693
G PP PPP P + G PP P G P AG
Sbjct: 235 GSPP-PPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPR 293
Query: 694 AGXXPXGPAPXXEXPKN--XPPXXXGXRTPXGLXXIP 798
AG P P P P PP G P G P
Sbjct: 294 AGSPPPPPPPRGSPPTGSLPPPQAGGSPPPAGTGSPP 330
Score = 31.1 bits (67), Expect = 1.1
Identities = 24/91 (26%), Positives = 28/91 (30%), Gaps = 2/91 (2%)
Frame = +1
Query: 487 PPGXGGWXXGXPPVPPPXXPXPPAVRXGGXXXAPPRXXIRXXPEP--GDTPGXTXXPXGX 660
PP G PPP P G PPR P P G P + P
Sbjct: 258 PPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPPPPPPRGSPPTGSLPP--- 314
Query: 661 QRAGTXKKGXVAGXXPXGPAPXXEXPKNXPP 753
+AG G P P + P+ PP
Sbjct: 315 PQAGGSPPPAGTGSPPPPPRQKRQAPERSPP 345
>AF000298-10|AAM97961.1| 539|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform c protein.
Length = 539
Score = 35.9 bits (79), Expect = 0.040
Identities = 27/97 (27%), Positives = 28/97 (28%), Gaps = 2/97 (2%)
Frame = +1
Query: 514 GXPPVPPPXXPXPPAVRXGGXXXAPPRXXIRXXPEPGDTPGXTXXPXGXQRAGTXKKGXV 693
G PP PPP P + G PP P G P AG
Sbjct: 256 GSPP-PPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPR 314
Query: 694 AGXXPXGPAPXXEXPKN--XPPXXXGXRTPXGLXXIP 798
AG P P P P PP G P G P
Sbjct: 315 AGSPPPPPPPRGSPPTGSLPPPQAGGSPPPAGTGSPP 351
Score = 31.1 bits (67), Expect = 1.1
Identities = 24/91 (26%), Positives = 28/91 (30%), Gaps = 2/91 (2%)
Frame = +1
Query: 487 PPGXGGWXXGXPPVPPPXXPXPPAVRXGGXXXAPPRXXIRXXPEP--GDTPGXTXXPXGX 660
PP G PPP P G PPR P P G P + P
Sbjct: 279 PPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPPPPPPRGSPPTGSLPP--- 335
Query: 661 QRAGTXKKGXVAGXXPXGPAPXXEXPKNXPP 753
+AG G P P + P+ PP
Sbjct: 336 PQAGGSPPPAGTGSPPPPPRQKRQAPERSPP 366
>AF000298-8|AAC48255.2| 524|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform a protein.
Length = 524
Score = 35.9 bits (79), Expect = 0.040
Identities = 27/97 (27%), Positives = 28/97 (28%), Gaps = 2/97 (2%)
Frame = +1
Query: 514 GXPPVPPPXXPXPPAVRXGGXXXAPPRXXIRXXPEPGDTPGXTXXPXGXQRAGTXKKGXV 693
G PP PPP P + G PP P G P AG
Sbjct: 241 GSPP-PPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPR 299
Query: 694 AGXXPXGPAPXXEXPKN--XPPXXXGXRTPXGLXXIP 798
AG P P P P PP G P G P
Sbjct: 300 AGSPPPPPPPRGSPPTGSLPPPQAGGSPPPAGTGSPP 336
Score = 31.1 bits (67), Expect = 1.1
Identities = 24/91 (26%), Positives = 28/91 (30%), Gaps = 2/91 (2%)
Frame = +1
Query: 487 PPGXGGWXXGXPPVPPPXXPXPPAVRXGGXXXAPPRXXIRXXPEP--GDTPGXTXXPXGX 660
PP G PPP P G PPR P P G P + P
Sbjct: 264 PPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPPPPPPRGSPPTGSLPP--- 320
Query: 661 QRAGTXKKGXVAGXXPXGPAPXXEXPKNXPP 753
+AG G P P + P+ PP
Sbjct: 321 PQAGGSPPPAGTGSPPPPPRQKRQAPERSPP 351
>Z67990-1|CAA91932.1| 316|Caenorhabditis elegans Hypothetical
protein F02D10.1 protein.
Length = 316
Score = 35.5 bits (78), Expect = 0.053
Identities = 34/100 (34%), Positives = 38/100 (38%), Gaps = 7/100 (7%)
Frame = -2
Query: 764 PXXXGGXFLGXSXXGAGPXGKXPATXPFFXVPALWXPXGXXVFPGVSPGSGXNRIXXLGG 585
P GG G + AGP G PA P PA P G PG G G + GG
Sbjct: 179 PGEPGGP--GPAGSPAGPSGPGPAGPPG---PA--GPPGNDGQPGQPGGPGQDGASSAGG 231
Query: 584 ------AXXXPPXRTAGGXGXXGGGTGGXPXXQ-PPXPGG 486
A P AG G G G+ G P + PP P G
Sbjct: 232 EAGPGPAGPPGPAGPAGPDGQSGSGSAGGPGPKGPPGPAG 271
Score = 28.3 bits (60), Expect = 8.1
Identities = 25/81 (30%), Positives = 26/81 (32%)
Frame = +1
Query: 475 GXXXPPGXGGWXXGXPPVPPPXXPXPPAVRXGGXXXAPPRXXIRXXPEPGDTPGXTXXPX 654
G PPG G G P P P PA G PP P G P
Sbjct: 168 GPPGPPGPDG-TPGEPGGPGPAGS--PAGPSGPGPAGPP-----GPAGPPGNDGQPGQPG 219
Query: 655 GXQRAGTXKKGXVAGXXPXGP 717
G + G G AG P GP
Sbjct: 220 GPGQDGASSAGGEAGPGPAGP 240
>Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical
protein C08B11.5 protein.
Length = 388
Score = 35.5 bits (78), Expect = 0.053
Identities = 24/79 (30%), Positives = 27/79 (34%), Gaps = 1/79 (1%)
Frame = +2
Query: 506 GXWGXLPFPXPXXPXPRPSGGGXXXXPPQGXXSGXPXNRGIPREXPXDXXAXKGPGPXKR 685
G W P P P P P G PP G P G+P P G P
Sbjct: 294 GMWPPPP-PPPPGRTPGPPGMPGMPPPPPPSRFGPPGMGGMPPPPPPGMRYPGGMPPPPP 352
Query: 686 AXWXAXXPXA-PPPXPSXP 739
+ + P PPP PS P
Sbjct: 353 PRYPSAGPGMYPPPPPSRP 371
Score = 31.5 bits (68), Expect = 0.86
Identities = 26/89 (29%), Positives = 28/89 (31%)
Frame = +1
Query: 487 PPGXGGWXXGXPPVPPPXXPXPPAVRXGGXXXAPPRXXIRXXPEPGDTPGXTXXPXGXQR 666
PP G W PP PP P PP G PP R P PG P G +
Sbjct: 290 PPSSGMWPPPPPP-PPGRTPGPP----GMPGMPPPPPPSRFGP-PGMGGMPPPPPPGMRY 343
Query: 667 AGTXKKGXVAGXXPXGPAPXXEXPKNXPP 753
G GP P + PP
Sbjct: 344 PGGMPPPPPPRYPSAGPGMYPPPPPSRPP 372
Score = 29.1 bits (62), Expect = 4.6
Identities = 33/119 (27%), Positives = 36/119 (30%), Gaps = 11/119 (9%)
Frame = +1
Query: 475 GXXXPPGXG----GWXXGXPPVPPPXX-------PXPPAVRXGGXXXAPPRXXIRXXPEP 621
G PP G G+ PPVPPP P PP PP + P P
Sbjct: 242 GYQPPPLMGMAQSGYQGQYPPVPPPPPSVTPMPPPMPPTPGMTPRPPPPPSSGM-WPPPP 300
Query: 622 GDTPGXTXXPXGXQRAGTXKKGXVAGXXPXGPAPXXEXPKNXPPXXXGXRTPXGLXXIP 798
PG T P G G G P PP G R P G+ P
Sbjct: 301 PPPPGRTPGPPGMPGMPPPPPPSRFGPPGMGGMP--------PPPPPGMRYPGGMPPPP 351
>U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA
binding protein protein.
Length = 398
Score = 35.5 bits (78), Expect = 0.053
Identities = 24/79 (30%), Positives = 27/79 (34%), Gaps = 1/79 (1%)
Frame = +2
Query: 506 GXWGXLPFPXPXXPXPRPSGGGXXXXPPQGXXSGXPXNRGIPREXPXDXXAXKGPGPXKR 685
G W P P P P P G PP G P G+P P G P
Sbjct: 304 GMWPPPP-PPPPGRTPGPPGMPGMPPPPPPSRFGPPGMGGMPPPPPPGMRYPGGMPPPPP 362
Query: 686 AXWXAXXPXA-PPPXPSXP 739
+ + P PPP PS P
Sbjct: 363 PRYPSAGPGMYPPPPPSRP 381
Score = 31.5 bits (68), Expect = 0.86
Identities = 26/89 (29%), Positives = 28/89 (31%)
Frame = +1
Query: 487 PPGXGGWXXGXPPVPPPXXPXPPAVRXGGXXXAPPRXXIRXXPEPGDTPGXTXXPXGXQR 666
PP G W PP PP P PP G PP R P PG P G +
Sbjct: 300 PPSSGMWPPPPPP-PPGRTPGPP----GMPGMPPPPPPSRFGP-PGMGGMPPPPPPGMRY 353
Query: 667 AGTXKKGXVAGXXPXGPAPXXEXPKNXPP 753
G GP P + PP
Sbjct: 354 PGGMPPPPPPRYPSAGPGMYPPPPPSRPP 382
Score = 29.1 bits (62), Expect = 4.6
Identities = 33/119 (27%), Positives = 36/119 (30%), Gaps = 11/119 (9%)
Frame = +1
Query: 475 GXXXPPGXG----GWXXGXPPVPPPXX-------PXPPAVRXGGXXXAPPRXXIRXXPEP 621
G PP G G+ PPVPPP P PP PP + P P
Sbjct: 252 GYQPPPLMGMAQSGYQGQYPPVPPPPPSVTPMPPPMPPTPGMTPRPPPPPSSGM-WPPPP 310
Query: 622 GDTPGXTXXPXGXQRAGTXKKGXVAGXXPXGPAPXXEXPKNXPPXXXGXRTPXGLXXIP 798
PG T P G G G P PP G R P G+ P
Sbjct: 311 PPPPGRTPGPPGMPGMPPPPPPSRFGPPGMGGMP--------PPPPPGMRYPGGMPPPP 361
>Z81479-3|CAB03942.1| 283|Caenorhabditis elegans Hypothetical
protein C34F6.3 protein.
Length = 283
Score = 34.3 bits (75), Expect = 0.12
Identities = 24/78 (30%), Positives = 28/78 (35%)
Frame = +2
Query: 506 GXWGXLPFPXPXXPXPRPSGGGXXXXPPQGXXSGXPXNRGIPREXPXDXXAXKGPGPXKR 685
G G + P P P P G G P +G G P RG P E D + PG +
Sbjct: 142 GPPGAVGGPGPKGPPGPPGGPGELGGPGRGGNRGPPGPRGPPGEAGPDGEGGR-PGQAGQ 200
Query: 686 AXWXAXXPXAPPPXPSXP 739
A P P P P
Sbjct: 201 TR-SAPSPPGQPGQPGEP 217
>Z81479-2|CAB03941.1| 283|Caenorhabditis elegans Hypothetical
protein C34F6.2 protein.
Length = 283
Score = 34.3 bits (75), Expect = 0.12
Identities = 24/78 (30%), Positives = 28/78 (35%)
Frame = +2
Query: 506 GXWGXLPFPXPXXPXPRPSGGGXXXXPPQGXXSGXPXNRGIPREXPXDXXAXKGPGPXKR 685
G G + P P P P G G P +G G P RG P E D + PG +
Sbjct: 142 GPPGAVGGPGPKGPPGPPGGPGELGGPGRGGNRGPPGPRGPPGEAGPDGEGGR-PGQAGQ 200
Query: 686 AXWXAXXPXAPPPXPSXP 739
A P P P P
Sbjct: 201 TR-SAPSPPGQPGQPGEP 217
>AC025721-11|AAK29900.1| 78|Caenorhabditis elegans Hypothetical
protein Y48G8AL.12 protein.
Length = 78
Score = 33.9 bits (74), Expect = 0.16
Identities = 16/33 (48%), Positives = 16/33 (48%)
Frame = +1
Query: 493 GXGGWXXGXPPVPPPXXPXPPAVRXGGXXXAPP 591
G GG G PP PPP PPA GG PP
Sbjct: 25 GGGGCGCGAPP-PPPACAPPPAPACGGGAPPPP 56
>AF022985-10|AAB69961.1| 325|Caenorhabditis elegans Collagen
protein 142 protein.
Length = 325
Score = 33.5 bits (73), Expect = 0.21
Identities = 22/53 (41%), Positives = 23/53 (43%), Gaps = 3/53 (5%)
Frame = -2
Query: 635 PGVSPGSGXNRIXXLGGAXXXP-PXRTAGGXGXXG--GGTGGXPXXQPPXPGG 486
PG +PG G R L G P P AGG G G GG G PP P G
Sbjct: 190 PG-NPGRGGQRSRGLPGPSGRPGPPGPAGGPGQPGHSGGAGSPGPQGPPGPSG 241
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 33.1 bits (72), Expect = 0.28
Identities = 21/56 (37%), Positives = 21/56 (37%), Gaps = 2/56 (3%)
Frame = +1
Query: 475 GXXXPPGXGGWXX--GXPPVPPPXXPXPPAVRXGGXXXAPPRXXIRXXPEPGDTPG 636
G PP GG G PP PPP PP GG PP P P PG
Sbjct: 725 GPPPPPPPGGLPPITGGPPPPPPPGGLPPI--SGGPPPPPPPPGGCPPPPPPPPPG 778
Score = 32.3 bits (70), Expect = 0.49
Identities = 30/98 (30%), Positives = 31/98 (31%), Gaps = 5/98 (5%)
Frame = +1
Query: 475 GXXXPPGXGGWXXGXPPVPPPXXPXPPAVRXGGXXXAPPRXXI----RXXPEPGDTPGXT 642
G PPG G PP PPP PP GG PP + P P PG
Sbjct: 712 GPPPPPGLPP-ITGGPPPPPPPGGLPPIT--GGPPPPPPPGGLPPISGGPPPPPPPPGGC 768
Query: 643 XXPXGXQRAGTXKKGXVAGXXPXGPAPXXE-XPKNXPP 753
P G K G P AP P PP
Sbjct: 769 PPPPPPPPPGGFKGGPPPPPPPGMFAPMAPVIPDYLPP 806
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 33.1 bits (72), Expect = 0.28
Identities = 21/56 (37%), Positives = 21/56 (37%), Gaps = 2/56 (3%)
Frame = +1
Query: 475 GXXXPPGXGGWXX--GXPPVPPPXXPXPPAVRXGGXXXAPPRXXIRXXPEPGDTPG 636
G PP GG G PP PPP PP GG PP P P PG
Sbjct: 725 GPPPPPPPGGLPPITGGPPPPPPPGGLPPI--SGGPPPPPPPPGGCPPPPPPPPPG 778
Score = 32.3 bits (70), Expect = 0.49
Identities = 30/98 (30%), Positives = 31/98 (31%), Gaps = 5/98 (5%)
Frame = +1
Query: 475 GXXXPPGXGGWXXGXPPVPPPXXPXPPAVRXGGXXXAPPRXXI----RXXPEPGDTPGXT 642
G PPG G PP PPP PP GG PP + P P PG
Sbjct: 712 GPPPPPGLPP-ITGGPPPPPPPGGLPPIT--GGPPPPPPPGGLPPISGGPPPPPPPPGGC 768
Query: 643 XXPXGXQRAGTXKKGXVAGXXPXGPAPXXE-XPKNXPP 753
P G K G P AP P PP
Sbjct: 769 PPPPPPPPPGGFKGGPPPPPPPGMFAPMAPVIPDYLPP 806
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 33.1 bits (72), Expect = 0.28
Identities = 21/56 (37%), Positives = 21/56 (37%), Gaps = 2/56 (3%)
Frame = +1
Query: 475 GXXXPPGXGGWXX--GXPPVPPPXXPXPPAVRXGGXXXAPPRXXIRXXPEPGDTPG 636
G PP GG G PP PPP PP GG PP P P PG
Sbjct: 308 GPPPPPPPGGLPPITGGPPPPPPPGGLPPI--SGGPPPPPPPPGGCPPPPPPPPPG 361
Score = 32.3 bits (70), Expect = 0.49
Identities = 30/98 (30%), Positives = 31/98 (31%), Gaps = 5/98 (5%)
Frame = +1
Query: 475 GXXXPPGXGGWXXGXPPVPPPXXPXPPAVRXGGXXXAPPRXXI----RXXPEPGDTPGXT 642
G PPG G PP PPP PP GG PP + P P PG
Sbjct: 295 GPPPPPGLPP-ITGGPPPPPPPGGLPPIT--GGPPPPPPPGGLPPISGGPPPPPPPPGGC 351
Query: 643 XXPXGXQRAGTXKKGXVAGXXPXGPAPXXE-XPKNXPP 753
P G K G P AP P PP
Sbjct: 352 PPPPPPPPPGGFKGGPPPPPPPGMFAPMAPVIPDYLPP 389
>Z12018-1|CAD88219.2| 774|Caenorhabditis elegans Hypothetical
protein ZK643.8 protein.
Length = 774
Score = 32.7 bits (71), Expect = 0.37
Identities = 14/31 (45%), Positives = 14/31 (45%)
Frame = -2
Query: 590 GGAXXXPPXRTAGGXGXXGGGTGGXPXXQPP 498
GG PP GG G GGG GG PP
Sbjct: 45 GGGCAPPPAPCGGGCGGGGGGCGGGGGCAPP 75
Score = 29.5 bits (63), Expect = 3.5
Identities = 12/24 (50%), Positives = 12/24 (50%)
Frame = -2
Query: 590 GGAXXXPPXRTAGGXGXXGGGTGG 519
GG PP GG G GGG GG
Sbjct: 69 GGGCAPPPAPCGGGCGGGGGGCGG 92
>Z11126-8|CAD88221.2| 774|Caenorhabditis elegans Hypothetical
protein ZK643.8 protein.
Length = 774
Score = 32.7 bits (71), Expect = 0.37
Identities = 14/31 (45%), Positives = 14/31 (45%)
Frame = -2
Query: 590 GGAXXXPPXRTAGGXGXXGGGTGGXPXXQPP 498
GG PP GG G GGG GG PP
Sbjct: 45 GGGCAPPPAPCGGGCGGGGGGCGGGGGCAPP 75
Score = 29.5 bits (63), Expect = 3.5
Identities = 12/24 (50%), Positives = 12/24 (50%)
Frame = -2
Query: 590 GGAXXXPPXRTAGGXGXXGGGTGG 519
GG PP GG G GGG GG
Sbjct: 69 GGGCAPPPAPCGGGCGGGGGGCGG 92
>U88314-13|ABR92611.1| 1346|Caenorhabditis elegans Formin homology
domain protein 1 protein.
Length = 1346
Score = 32.7 bits (71), Expect = 0.37
Identities = 17/40 (42%), Positives = 20/40 (50%), Gaps = 2/40 (5%)
Frame = +1
Query: 514 GXPPVPPP--XXPXPPAVRXGGXXXAPPRXXIRXXPEPGD 627
G PP PPP P PP ++ GG PP I P PG+
Sbjct: 768 GVPPPPPPPSAIPLPPRLQ-GGIPPPPPLGIIPPPPPPGN 806
>AB084086-1|BAC67013.1| 1346|Caenorhabditis elegans Formactin
protein.
Length = 1346
Score = 32.7 bits (71), Expect = 0.37
Identities = 17/40 (42%), Positives = 20/40 (50%), Gaps = 2/40 (5%)
Frame = +1
Query: 514 GXPPVPPP--XXPXPPAVRXGGXXXAPPRXXIRXXPEPGD 627
G PP PPP P PP ++ GG PP I P PG+
Sbjct: 768 GVPPPPPPPSAIPLPPRLQ-GGIPPPPPLGIIPPPPPPGN 806
>Z81503-1|CAB04111.1| 305|Caenorhabditis elegans Hypothetical
protein F14F7.1 protein.
Length = 305
Score = 32.3 bits (70), Expect = 0.49
Identities = 18/60 (30%), Positives = 20/60 (33%)
Frame = +3
Query: 603 PVXPXTGGYPGKXXXTXXPPKGRDPEKGPXGXRFXXRPRPPXRASQKXAPPXXGXANPXG 782
P P GG PG P P + G RP PP + AP G A G
Sbjct: 148 PCKPCPGGRPGPPGPPGRPGSDGQPGRPATGGGAAPRPGPPGPKGPRGAPGNSGRAGAPG 207
Score = 28.3 bits (60), Expect = 8.1
Identities = 25/91 (27%), Positives = 28/91 (30%), Gaps = 3/91 (3%)
Frame = +1
Query: 487 PPGXGGWXXGXP--PVPPPXXPXPPAVRXGGXXXAPPRXXIRXXPEPGDTPGXTXXPXGX 660
PPG GG G P P P P GG P P PG PG P
Sbjct: 108 PPGAGG-TPGKPGRPGAPGAWGMPGNPGKGGSGPCHPVVPTPCKPCPGGRPGPPGPPGRP 166
Query: 661 QRAGTXKKGXVAGXXPXGPA-PXXEXPKNXP 750
G + G P P + P+ P
Sbjct: 167 GSDGQPGRPATGGGAAPRPGPPGPKGPRGAP 197
>AF047656-13|AAC05105.1| 313|Caenorhabditis elegans Collagen
protein 116 protein.
Length = 313
Score = 32.3 bits (70), Expect = 0.49
Identities = 41/155 (26%), Positives = 47/155 (30%), Gaps = 2/155 (1%)
Frame = +3
Query: 327 GKXGXXGXIGEXXAXXXPXXPGXXXVTTTNGFXXRFQVRGEXXEVXPA*RXRPPPGXXXL 506
G G G GE P G T T + E + PA PPG
Sbjct: 110 GPPGIFGPPGEDGTPGEPGLDGDPGTTATRQMAMDYTGGSECVKC-PA----GPPG---- 160
Query: 507 AXGAPSRSPXXXXXXXXXXXXXXXXXPPKGGNPVXPXTGGYPGKXXXTXXPPKGRDPEKG 686
A G P+ P P G P P GYPG+ +G+D G
Sbjct: 161 APG-PNGPPGYEGQMGVPGLPGDGPTPGSPGPPGPPGPPGYPGRQGC-----QGKDGPSG 214
Query: 687 PXGXRFXXRPRPPXRASQ--KXAPPXXGXANPXGA 785
G RF P P A PP N GA
Sbjct: 215 DPGLRFIKTPGPVGAAGPPGPPGPPGSPGENTEGA 249
>Z70756-6|CAA94792.1| 290|Caenorhabditis elegans Hypothetical
protein T06E4.6 protein.
Length = 290
Score = 31.9 bits (69), Expect = 0.65
Identities = 23/58 (39%), Positives = 24/58 (41%), Gaps = 4/58 (6%)
Frame = -2
Query: 635 PGVSPGSGXNRIXXLGGAXXXP-PXRTAGGXGXXG--GGTGGX-PXXQPPXPGGXXXP 474
PG +PG G R G P P AGG G G GG G P P PGG P
Sbjct: 187 PG-APGQGGQRSRGTPGPAGAPGPQGPAGGPGQPGQSGGAGAPGPAGAPGAPGGPGQP 243
>Z68219-2|CAA92476.1| 300|Caenorhabditis elegans Hypothetical
protein T05A1.2 protein.
Length = 300
Score = 31.5 bits (68), Expect = 0.86
Identities = 32/112 (28%), Positives = 35/112 (31%), Gaps = 9/112 (8%)
Frame = +1
Query: 475 GXXXPPGXGGWXXGXPPVPP--PXXPXP-PAVRXG--GXXXAPPRXXIRXXPEPGDTPGX 639
G PG G G PP P P P P PA G G AP + P P G
Sbjct: 119 GRPGAPGAPG-HPGKPPQSPCEPLTPPPCPACPPGPPGAPGAPGKPGSEGPPGPPGHDGP 177
Query: 640 TXXPXGXQRAG----TXKKGXVAGXXPXGPAPXXEXPKNXPPXXXGXRTPXG 783
P + G G P GP + PK P G P G
Sbjct: 178 NGGPGQPGQPGPHGPNGHPGKPGSQGPPGPPGHSDEPKPGQPGQPGRAGPRG 229
>U58751-5|AAN84882.1| 781|Caenorhabditis elegans Wasp (actin
cytoskeleton modulator)homolog protein 1, isoform b
protein.
Length = 781
Score = 31.1 bits (67), Expect = 1.1
Identities = 19/68 (27%), Positives = 20/68 (29%)
Frame = +2
Query: 536 PXXPXPRPSGGGXXXXPPQGXXSGXPXNRGIPREXPXDXXAXKGPGPXKRAXWXAXXPXA 715
P P P P G P P N G P P P P + A
Sbjct: 571 PARPPPPPPSSGTRGIAPSRPLPQAP-NYGTPENRPHAVPPPPPPPPPQSFGMAPISSAA 629
Query: 716 PPPXPSXP 739
PPP P P
Sbjct: 630 PPPPPPPP 637
>U58751-4|AAN84881.1| 607|Caenorhabditis elegans Wasp (actin
cytoskeleton modulator)homolog protein 1, isoform a
protein.
Length = 607
Score = 31.1 bits (67), Expect = 1.1
Identities = 19/68 (27%), Positives = 20/68 (29%)
Frame = +2
Query: 536 PXXPXPRPSGGGXXXXPPQGXXSGXPXNRGIPREXPXDXXAXKGPGPXKRAXWXAXXPXA 715
P P P P G P P N G P P P P + A
Sbjct: 397 PARPPPPPPSSGTRGIAPSRPLPQAP-NYGTPENRPHAVPPPPPPPPPQSFGMAPISSAA 455
Query: 716 PPPXPSXP 739
PPP P P
Sbjct: 456 PPPPPPPP 463
>U53155-5|AAC48270.1| 303|Caenorhabditis elegans Collagen protein
43 protein.
Length = 303
Score = 31.1 bits (67), Expect = 1.1
Identities = 18/65 (27%), Positives = 21/65 (32%)
Frame = +2
Query: 545 PXPRPSGGGXXXXPPQGXXSGXPXNRGIPREXPXDXXAXKGPGPXKRAXWXAXXPXAPPP 724
P P P G P + G P G+P + P P P K P PP
Sbjct: 106 PGP-PGPAGVPGKPGKPGRPGAPGQPGVPGKPPTAPCEPTTPPPCKPCPQGPPGPPGPPG 164
Query: 725 XPSXP 739
P P
Sbjct: 165 APGDP 169
>AF101312-1|AAC69221.3| 813|Caenorhabditis elegans Hypothetical
protein F56E10.2 protein.
Length = 813
Score = 31.1 bits (67), Expect = 1.1
Identities = 14/34 (41%), Positives = 18/34 (52%)
Frame = +1
Query: 520 PPVPPPXXPXPPAVRXGGXXXAPPRXXIRXXPEP 621
PPV PP P PP G +PP+ ++ PEP
Sbjct: 324 PPVCPPAPPPPPP--PIGGLTSPPKDALKNVPEP 355
>AB072926-1|BAB69889.1| 303|Caenorhabditis elegans collagen
protein.
Length = 303
Score = 31.1 bits (67), Expect = 1.1
Identities = 18/65 (27%), Positives = 21/65 (32%)
Frame = +2
Query: 545 PXPRPSGGGXXXXPPQGXXSGXPXNRGIPREXPXDXXAXKGPGPXKRAXWXAXXPXAPPP 724
P P P G P + G P G+P + P P P K P PP
Sbjct: 106 PGP-PGPAGVPGKPGKPGRPGAPGQPGVPGKPPTAPCEPTTPPPCKPCPQGPPGPPGPPG 164
Query: 725 XPSXP 739
P P
Sbjct: 165 APGDP 169
>Z27078-7|CAE52901.2| 1502|Caenorhabditis elegans Hypothetical protein
K04H4.1b protein.
Length = 1502
Score = 30.7 bits (66), Expect = 1.5
Identities = 34/139 (24%), Positives = 42/139 (30%), Gaps = 5/139 (3%)
Frame = +3
Query: 273 PNXXGSXXXXGXPPXKRR-GKXGXXGXIGEXXAXXXPXXPGXXXVTTTNGFXXRFQVRGE 449
P G+ G P + G G G G+ P PG +GF R + G
Sbjct: 1109 PGAPGAPGSNGYPGERGLPGVPGQQGRSGDNGYPGAPGQPGIKGPRGDDGFPGRDGLDGL 1168
Query: 450 XXEVXPA*RXRPPPGXXXLAX--GAPSRS--PXXXXXXXXXXXXXXXXXPPKGGNPVXPX 617
P P P + G P + P P K G P P
Sbjct: 1169 PGR--PGREGLPGPMAMAVRNPPGQPGENGYPGEKGYPGLPGDNGLSGPPGKAGYPGAPG 1226
Query: 618 TGGYPGKXXXTXXPPKGRD 674
T GYPG + P G D
Sbjct: 1227 TDGYPGPPGLSGMPGHGGD 1245
>Z27078-6|CAA81584.4| 1759|Caenorhabditis elegans Hypothetical protein
K04H4.1a protein.
Length = 1759
Score = 30.7 bits (66), Expect = 1.5
Identities = 34/139 (24%), Positives = 42/139 (30%), Gaps = 5/139 (3%)
Frame = +3
Query: 273 PNXXGSXXXXGXPPXKRR-GKXGXXGXIGEXXAXXXPXXPGXXXVTTTNGFXXRFQVRGE 449
P G+ G P + G G G G+ P PG +GF R + G
Sbjct: 1366 PGAPGAPGSNGYPGERGLPGVPGQQGRSGDNGYPGAPGQPGIKGPRGDDGFPGRDGLDGL 1425
Query: 450 XXEVXPA*RXRPPPGXXXLAX--GAPSRS--PXXXXXXXXXXXXXXXXXPPKGGNPVXPX 617
P P P + G P + P P K G P P
Sbjct: 1426 PGR--PGREGLPGPMAMAVRNPPGQPGENGYPGEKGYPGLPGDNGLSGPPGKAGYPGAPG 1483
Query: 618 TGGYPGKXXXTXXPPKGRD 674
T GYPG + P G D
Sbjct: 1484 TDGYPGPPGLSGMPGHGGD 1502
>X56979-1|CAA40299.1| 1758|Caenorhabditis elegans alpha1(IV) collagen
protein.
Length = 1758
Score = 30.7 bits (66), Expect = 1.5
Identities = 34/139 (24%), Positives = 42/139 (30%), Gaps = 5/139 (3%)
Frame = +3
Query: 273 PNXXGSXXXXGXPPXKRR-GKXGXXGXIGEXXAXXXPXXPGXXXVTTTNGFXXRFQVRGE 449
P G+ G P + G G G G+ P PG +GF R + G
Sbjct: 1365 PGAPGAPGSNGYPGERGLPGVPGQQGRSGDNGYPGAPGQPGIKGPRGDDGFPGRDGLDGL 1424
Query: 450 XXEVXPA*RXRPPPGXXXLAX--GAPSRS--PXXXXXXXXXXXXXXXXXPPKGGNPVXPX 617
P P P + G P + P P K G P P
Sbjct: 1425 PGR--PGREGLPGPMAMAVRNPPGQPGENGYPGEKGYPGLPGDNGLSGPPGKAGYPGAPG 1482
Query: 618 TGGYPGKXXXTXXPPKGRD 674
T GYPG + P G D
Sbjct: 1483 TDGYPGPPGLSGMPGHGGD 1501
>U41557-6|AAA83307.1| 589|Caenorhabditis elegans Collagen sequence
x-hybridizingprotein 1 protein.
Length = 589
Score = 30.7 bits (66), Expect = 1.5
Identities = 22/66 (33%), Positives = 25/66 (37%), Gaps = 2/66 (3%)
Frame = +3
Query: 585 PPKGGNPVX-PXTGGYPGKXXXTXXPPKGRDPEKGPXGXR-FXXRPRPPXRASQKXAPPX 758
PP NP P +GG PG + PP G P GP PP + APP
Sbjct: 406 PPGPFNPSGAPPSGGPPGPFNPSGAPPSGGPP--GPFNPSGAPPSGGPPGPFNPSGAPPS 463
Query: 759 XGXANP 776
G P
Sbjct: 464 GGPPGP 469
Score = 30.3 bits (65), Expect = 2.0
Identities = 22/66 (33%), Positives = 24/66 (36%), Gaps = 2/66 (3%)
Frame = +3
Query: 585 PPKGGNPVX-PXTGGYPGKXXXTXXPPKGRDPEKGPXGXR-FXXRPRPPXRASQKXAPPX 758
PP NP P +GG PG + PP G P GP PP APP
Sbjct: 316 PPGPFNPSGAPPSGGPPGPFDPSGAPPSGGPP--GPFNPSGAPPSGGPPGPFDPSGAPPS 373
Query: 759 XGXANP 776
G P
Sbjct: 374 GGPPGP 379
Score = 30.3 bits (65), Expect = 2.0
Identities = 23/71 (32%), Positives = 26/71 (36%), Gaps = 7/71 (9%)
Frame = +3
Query: 585 PPKGGNPVX------PXTGGYPGKXXXTXXPPKGRDPEKGPXGXR-FXXRPRPPXRASQK 743
PP GG P P +GG PG + PP G P GP PP +
Sbjct: 356 PPSGGPPGPFDPSGAPPSGGPPGPFDPSGAPPSGGPP--GPFDPSGAPPSGGPPGPFNPS 413
Query: 744 XAPPXXGXANP 776
APP G P
Sbjct: 414 GAPPSGGPPGP 424
Score = 30.3 bits (65), Expect = 2.0
Identities = 22/66 (33%), Positives = 25/66 (37%), Gaps = 2/66 (3%)
Frame = +3
Query: 585 PPKGGNPVX-PXTGGYPGKXXXTXXPPKGRDPEKGPXGXR-FXXRPRPPXRASQKXAPPX 758
PP NP P +GG PG + PP G P GP PP + APP
Sbjct: 451 PPGPFNPSGAPPSGGPPGPFNPSGAPPSGGPP--GPFDPSGAPPSGGPPGPFNPSGAPPS 508
Query: 759 XGXANP 776
G P
Sbjct: 509 GGPPGP 514
Score = 29.5 bits (63), Expect = 3.5
Identities = 24/72 (33%), Positives = 26/72 (36%), Gaps = 5/72 (6%)
Frame = +3
Query: 585 PPKGGNPVX-PXTGGYPGKXXXTXXPPKGRDP----EKGPXGXRFXXRPRPPXRASQKXA 749
PP NP P +GG PG + PP G P G P P A
Sbjct: 256 PPGPFNPSGAPPSGGPPGPFDPSGAPPSGGPPGPFDPSGAPPSGGPPGPFDPSGAQPSGG 315
Query: 750 PPXXGXANPXGA 785
PP G NP GA
Sbjct: 316 PP--GPFNPSGA 325
Score = 29.5 bits (63), Expect = 3.5
Identities = 28/90 (31%), Positives = 31/90 (34%), Gaps = 1/90 (1%)
Frame = +1
Query: 487 PPGXGGWXXGXPPVPPPXXPXPPAVRXGGXXXAPPRXXIRXXPEPGDTPGXTXXPXGXQR 666
PPG G PP P P P+ APP + P P D P + P Q
Sbjct: 496 PPGPFN-PSGAPPSGGPPGPFDPS-------GAPPSG-MPPVPLPTDLPIPSESPSFFQW 546
Query: 667 A-GTXKKGXVAGXXPXGPAPXXEXPKNXPP 753
G K AG P G P P PP
Sbjct: 547 IFGRPKPSGPAGPAPSGEPPGPFDPSGPPP 576
Score = 28.7 bits (61), Expect = 6.1
Identities = 27/100 (27%), Positives = 31/100 (31%), Gaps = 3/100 (3%)
Frame = +3
Query: 486 PPGXXXLAXGAPSRSPXXXXXXXXXXXXXXXXXP--PKGGNPVXPXTGGYPGKXXXTXXP 659
PPG + PS P P P G P +GG PG + P
Sbjct: 181 PPGPFGPSGAPPSGGPPGPFNPSEAPPSGGPTGPFDPSGA----PPSGGPPGPFNPSGAP 236
Query: 660 PKGRDPEKGPXGXR-FXXRPRPPXRASQKXAPPXXGXANP 776
P G P GP PP + APP G P
Sbjct: 237 PSGGPP--GPFDPSGAPPSGGPPGPFNPSGAPPSGGPPGP 274
>AF022985-12|AAB69959.1| 319|Caenorhabditis elegans Collagen
protein 143 protein.
Length = 319
Score = 30.7 bits (66), Expect = 1.5
Identities = 22/53 (41%), Positives = 23/53 (43%), Gaps = 3/53 (5%)
Frame = -2
Query: 635 PGVSPGSGXNRIXXLGGAXXXP-PXRTAGGXGXXG-GGTGGXPXXQ-PPXPGG 486
PG +PG G R GA P P AG G G G G P Q PP P G
Sbjct: 190 PG-NPGRGGQRSRGTPGASGRPGPQGPAGAPGQPGRSGGAGTPGPQGPPGPSG 241
>AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical
protein F59E12.9 protein.
Length = 1621
Score = 30.7 bits (66), Expect = 1.5
Identities = 25/104 (24%), Positives = 32/104 (30%)
Frame = +1
Query: 472 KGXXXPPGXGGWXXGXPPVPPPXXPXPPAVRXGGXXXAPPRXXIRXXPEPGDTPGXTXXP 651
+G PP G +PPP P +R G P P PG
Sbjct: 1463 RGRGGPPPPRGMNSPMRGMPPPMRGGGPPMRGGPPMRGGPPMFRGGPPGPGRGMPSPMMR 1522
Query: 652 XGXQRAGTXKKGXVAGXXPXGPAPXXEXPKNXPPXXXGXRTPXG 783
R G ++G G P + P+N P G P G
Sbjct: 1523 GSSMRGGFPQRGGGPGMGP--SQYYHDSPQNRGPPMGGLPPPHG 1564
>AF003139-6|AAB54156.1| 327|Caenorhabditis elegans Collagen protein
45 protein.
Length = 327
Score = 30.7 bits (66), Expect = 1.5
Identities = 24/69 (34%), Positives = 25/69 (36%), Gaps = 3/69 (4%)
Frame = +3
Query: 585 PPKGGNPVXPXTGGYPGKXXXTXXPP--KGRDPEKGPXGXRFXXRPRPPXRA-SQKXAPP 755
P G P P G GK PP GR E GP G PR A +K AP
Sbjct: 227 PGPPGYPGRPGETGDHGKTIAGEAPPGPPGRQGEMGPQGPPGPPGPRGKDGAGGEKGAPG 286
Query: 756 XXGXANPXG 782
G P G
Sbjct: 287 DQGNPGPYG 295
>Z81472-1|CAB03889.1| 173|Caenorhabditis elegans Hypothetical
protein C16D6.1 protein.
Length = 173
Score = 30.3 bits (65), Expect = 2.0
Identities = 18/51 (35%), Positives = 19/51 (37%)
Frame = +1
Query: 505 WXXGXPPVPPPXXPXPPAVRXGGXXXAPPRXXIRXXPEPGDTPGXTXXPXG 657
W G PP PPP P PP + A P P PG T P G
Sbjct: 64 WFNGGPPGPPPHGPPPPHLLHALPHPAYP------PGHPLHMPGMTMMPMG 108
>Z79596-1|CAB01857.1| 830|Caenorhabditis elegans Hypothetical
protein C02C6.1a protein.
Length = 830
Score = 30.3 bits (65), Expect = 2.0
Identities = 21/73 (28%), Positives = 24/73 (32%)
Frame = +2
Query: 524 PFPXPXXPXPRPSGGGXXXXPPQGXXSGXPXNRGIPREXPXDXXAXKGPGPXKRAXWXAX 703
P P P P P P GG PP+G P P P G G
Sbjct: 763 PSPVPR-PAPAPPGGRQAPMPPRGGPGAPPP----PGMRPPPGAPGGGGGMYPPLIPTRP 817
Query: 704 XPXAPPPXPSXPK 742
P PPP + P+
Sbjct: 818 GPGGPPPNMAPPR 830
Score = 28.7 bits (61), Expect = 6.1
Identities = 26/80 (32%), Positives = 26/80 (32%)
Frame = +1
Query: 514 GXPPVPPPXXPXPPAVRXGGXXXAPPRXXIRXXPEPGDTPGXTXXPXGXQRAGTXKKGXV 693
G PVP P P PP G PPR P PG P P G G G
Sbjct: 762 GPSPVPRPA-PAPPG---GRQAPMPPRGGPGAPPPPGMRP-----PPGAPGGG---GGMY 809
Query: 694 AGXXPXGPAPXXEXPKNXPP 753
P P P P PP
Sbjct: 810 PPLIPTRPGPGGPPPNMAPP 829
Score = 28.3 bits (60), Expect = 8.1
Identities = 20/54 (37%), Positives = 20/54 (37%)
Frame = +1
Query: 490 PGXGGWXXGXPPVPPPXXPXPPAVRXGGXXXAPPRXXIRXXPEPGDTPGXTXXP 651
P GG G PP PP PP GG PP R P PG P P
Sbjct: 782 PPRGG--PGAPP--PPGMRPPPGAPGGGGGMYPPLIPTR--PGPGGPPPNMAPP 829
>Z74036-2|CAA98487.1| 266|Caenorhabditis elegans Hypothetical
protein F55C10.3 protein.
Length = 266
Score = 30.3 bits (65), Expect = 2.0
Identities = 21/66 (31%), Positives = 24/66 (36%), Gaps = 1/66 (1%)
Frame = +2
Query: 530 PXPXXPXPRPSGGGXXXXPPQGXXSGXPXNRGIPREXPXDXXAXKGPG-PXKRAXWXAXX 706
P P P G G P Q G P N+G P + A PG P + A
Sbjct: 123 PGPPGPSGDAGGNGNPGSPGQDGQPGAPGNKG-PSGPNGNPGAPGAPGQPGQDAPSEPIT 181
Query: 707 PXAPPP 724
P AP P
Sbjct: 182 PGAPGP 187
>Z74036-1|CAA98486.1| 299|Caenorhabditis elegans Hypothetical
protein F55C10.2 protein.
Length = 299
Score = 30.3 bits (65), Expect = 2.0
Identities = 21/66 (31%), Positives = 24/66 (36%), Gaps = 1/66 (1%)
Frame = +2
Query: 530 PXPXXPXPRPSGGGXXXXPPQGXXSGXPXNRGIPREXPXDXXAXKGPG-PXKRAXWXAXX 706
P P P G G P Q G P N+G P + A PG P + A
Sbjct: 156 PGPPGPSGDAGGNGNPGSPGQDGQPGAPGNKG-PSGPNGNPGAPGAPGQPGQDAPSEPIT 214
Query: 707 PXAPPP 724
P AP P
Sbjct: 215 PGAPGP 220
>Z70756-4|CAA94788.1| 290|Caenorhabditis elegans Hypothetical
protein T06E4.4 protein.
Length = 290
Score = 30.3 bits (65), Expect = 2.0
Identities = 22/54 (40%), Positives = 23/54 (42%), Gaps = 4/54 (7%)
Frame = -2
Query: 635 PGVSPGSGXNRIXXLGGAXXXP-PXRTAGGXGXXG--GGTGG-XPXXQPPXPGG 486
PG +PG G R G P P AGG G G GG G P P PGG
Sbjct: 187 PG-APGQGGQRSRGTPGPSGAPGPQGPAGGPGQPGQSGGAGAPGPAGAPGAPGG 239
>L29031-1|AAB72228.2| 830|Caenorhabditis elegans dynamin protein.
Length = 830
Score = 30.3 bits (65), Expect = 2.0
Identities = 21/73 (28%), Positives = 24/73 (32%)
Frame = +2
Query: 524 PFPXPXXPXPRPSGGGXXXXPPQGXXSGXPXNRGIPREXPXDXXAXKGPGPXKRAXWXAX 703
P P P P P P GG PP+G P P P G G
Sbjct: 763 PSPVPR-PAPAPPGGRQAPMPPRGGPGAPPP----PGMRPPPGAPGGGGGMYPPLIPTRP 817
Query: 704 XPXAPPPXPSXPK 742
P PPP + P+
Sbjct: 818 GPGGPPPNMAPPR 830
Score = 28.7 bits (61), Expect = 6.1
Identities = 26/80 (32%), Positives = 26/80 (32%)
Frame = +1
Query: 514 GXPPVPPPXXPXPPAVRXGGXXXAPPRXXIRXXPEPGDTPGXTXXPXGXQRAGTXKKGXV 693
G PVP P P PP G PPR P PG P P G G G
Sbjct: 762 GPSPVPRPA-PAPPG---GRQAPMPPRGGPGAPPPPGMRP-----PPGAPGGG---GGMY 809
Query: 694 AGXXPXGPAPXXEXPKNXPP 753
P P P P PP
Sbjct: 810 PPLIPTRPGPGGPPPNMAPP 829
Score = 28.3 bits (60), Expect = 8.1
Identities = 20/54 (37%), Positives = 20/54 (37%)
Frame = +1
Query: 490 PGXGGWXXGXPPVPPPXXPXPPAVRXGGXXXAPPRXXIRXXPEPGDTPGXTXXP 651
P GG G PP PP PP GG PP R P PG P P
Sbjct: 782 PPRGG--PGAPP--PPGMRPPPGAPGGGGGMYPPLIPTR--PGPGGPPPNMAPP 829
>Z73425-2|CAA97788.1| 1126|Caenorhabditis elegans Hypothetical
protein F12F6.6 protein.
Length = 1126
Score = 29.9 bits (64), Expect = 2.6
Identities = 25/101 (24%), Positives = 29/101 (28%), Gaps = 2/101 (1%)
Frame = +1
Query: 487 PPGXGGWXXGXPPVPP-PXXPXPPAVRXGGXXXAPPRXXIRXXPEPGDTPGXTXXPXGXQ 663
PPG GG+ G P P P P G P + PG + G
Sbjct: 226 PPGTGGFPPGQPTAGSFPPGPQVPGSYPSGPADIPQGPGMPRAFPPGASAPVAPGMPGAF 285
Query: 664 RAGTXKKGXVAGXXPXGPAPXXE-XPKNXPPXXXGXRTPXG 783
G G P P P P + P G P G
Sbjct: 286 PPGQGGPGMPGSFPPGAPGPGGPGMPGSFAPGAPGPGGPGG 326
>AF098501-3|AAM69106.1| 275|Caenorhabditis elegans Hypothetical
protein H28G03.2c protein.
Length = 275
Score = 29.9 bits (64), Expect = 2.6
Identities = 18/58 (31%), Positives = 20/58 (34%), Gaps = 3/58 (5%)
Frame = +1
Query: 487 PPGXGGWXXGXPPV---PPPXXPXPPAVRXGGXXXAPPRXXIRXXPEPGDTPGXTXXP 651
PPG G PP+ PPP PP + G A P P P P P
Sbjct: 84 PPGMGPPPFMPPPIGMPPPPLGMPPPHIGLGAAPYAVPPPMSLLGPPPFSVPPSVPPP 141
>AF098501-2|AAM69105.1| 298|Caenorhabditis elegans Hypothetical
protein H28G03.2b protein.
Length = 298
Score = 29.9 bits (64), Expect = 2.6
Identities = 18/58 (31%), Positives = 20/58 (34%), Gaps = 3/58 (5%)
Frame = +1
Query: 487 PPGXGGWXXGXPPV---PPPXXPXPPAVRXGGXXXAPPRXXIRXXPEPGDTPGXTXXP 651
PPG G PP+ PPP PP + G A P P P P P
Sbjct: 107 PPGMGPPPFMPPPIGMPPPPLGMPPPHIGLGAAPYAVPPPMSLLGPPPFSVPPSVPPP 164
>AF098501-1|AAC67404.2| 548|Caenorhabditis elegans Hypothetical
protein H28G03.2a protein.
Length = 548
Score = 29.9 bits (64), Expect = 2.6
Identities = 18/58 (31%), Positives = 20/58 (34%), Gaps = 3/58 (5%)
Frame = +1
Query: 487 PPGXGGWXXGXPPV---PPPXXPXPPAVRXGGXXXAPPRXXIRXXPEPGDTPGXTXXP 651
PPG G PP+ PPP PP + G A P P P P P
Sbjct: 357 PPGMGPPPFMPPPIGMPPPPLGMPPPHIGLGAAPYAVPPPMSLLGPPPFSVPPSVPPP 414
>AF000198-8|AAP68908.1| 435|Caenorhabditis elegans Collagen protein
51 protein.
Length = 435
Score = 29.9 bits (64), Expect = 2.6
Identities = 25/85 (29%), Positives = 26/85 (30%), Gaps = 4/85 (4%)
Frame = +1
Query: 475 GXXXPPGXGGWXXGXPPVPPPXXPXPPA--VRXG--GXXXAPPRXXIRXXPEPGDTPGXT 642
G PG G PP PP P PP + G G P PG PG
Sbjct: 196 GAPGVPGPDGDAGSPPPPGPPGPPGPPGNDGQPGAPGQDGQPGAPGTNTVNSPGG-PGPA 254
Query: 643 XXPXGXQRAGTXKKGXVAGXXPXGP 717
P G G A P GP
Sbjct: 255 GPPGPPGPPGQDGSGGAAQPGPPGP 279
>AC024847-11|AAO21416.1| 453|Caenorhabditis elegans Ground-like
(grd related) protein16, isoform b protein.
Length = 453
Score = 29.9 bits (64), Expect = 2.6
Identities = 15/33 (45%), Positives = 16/33 (48%)
Frame = +1
Query: 493 GXGGWXXGXPPVPPPXXPXPPAVRXGGXXXAPP 591
G GG P +PPP P PPA GG A P
Sbjct: 51 GGGGSYAAAPALPPP-PPPPPAPIGGGAGYAAP 82
>AC024847-10|AAF60859.1| 393|Caenorhabditis elegans Ground-like
(grd related) protein16, isoform a protein.
Length = 393
Score = 29.9 bits (64), Expect = 2.6
Identities = 15/33 (45%), Positives = 16/33 (48%)
Frame = +1
Query: 493 GXGGWXXGXPPVPPPXXPXPPAVRXGGXXXAPP 591
G GG P +PPP P PPA GG A P
Sbjct: 51 GGGGSYAAAPALPPP-PPPPPAPIGGGAGYAAP 82
>AC024809-7|AAF59540.1| 315|Caenorhabditis elegans Hypothetical
protein Y53G8AR.9 protein.
Length = 315
Score = 29.9 bits (64), Expect = 2.6
Identities = 12/23 (52%), Positives = 13/23 (56%)
Frame = -2
Query: 554 GGXGXXGGGTGGXPXXQPPXPGG 486
GG G GGG+G P PP GG
Sbjct: 199 GGSGGSGGGSGRFPPPPPPYGGG 221
>Z81592-1|CAB04725.1| 695|Caenorhabditis elegans Hypothetical
protein T16G1.1 protein.
Length = 695
Score = 29.5 bits (63), Expect = 3.5
Identities = 17/43 (39%), Positives = 20/43 (46%)
Frame = -2
Query: 650 GXXVFPGVSPGSGXNRIXXLGGAXXXPPXRTAGGXGXXGGGTG 522
G + P S GSG NR G PP R++G G GG G
Sbjct: 515 GRPMKPPSSSGSGSNR--RSGPPPPPPPPRSSGANGNRNGGGG 555
>Z81124-1|CAB03369.1| 312|Caenorhabditis elegans Hypothetical
protein T21B4.2 protein.
Length = 312
Score = 29.5 bits (63), Expect = 3.5
Identities = 18/56 (32%), Positives = 19/56 (33%)
Frame = -1
Query: 672 PGPLXAXXSXGXSRGIPRFXGXPDXXPWGGXXXXPPPDGRGXGXXGXGNGRXPXXP 505
PGP + G G P G P P GG P P G G G P P
Sbjct: 171 PGPAGPAGNAGPP-GAPGGPGAPGNTPSGGAAGPPGPPGPPGGPGNDGQPGGPGNP 225
Score = 28.3 bits (60), Expect = 8.1
Identities = 24/83 (28%), Positives = 24/83 (28%), Gaps = 5/83 (6%)
Frame = +1
Query: 487 PPGXGGWXXGXPPVPPPXXPXPPAVRXGGXXXAPPRXXIRXXPEPGDTPGXTXXPXGXQR 666
PPG G P P P P G PP P P PG P G
Sbjct: 170 PPGPAGPAGNAGPPGAPGGPGAPGNTPSGGAAGPP-----GPPGPPGGPGNDGQPGGPGN 224
Query: 667 AG-----TXKKGXVAGXXPXGPA 720
G T G P GPA
Sbjct: 225 PGAPGAVTEVPGQQGPPGPPGPA 247
>Z74472-4|CAA98942.1| 301|Caenorhabditis elegans Hypothetical
protein F23H12.4 protein.
Length = 301
Score = 29.5 bits (63), Expect = 3.5
Identities = 18/65 (27%), Positives = 20/65 (30%)
Frame = +2
Query: 545 PXPRPSGGGXXXXPPQGXXSGXPXNRGIPREXPXDXXAXKGPGPXKRAXWXAXXPXAPPP 724
P P P G P + G P G P + P P P K P PP
Sbjct: 104 PGP-PGPAGAPGKPGKPGRPGAPGTPGTPGKPPVAPCEPTTPPPCKPCPQGPPGPPGPPG 162
Query: 725 XPSXP 739
P P
Sbjct: 163 APGDP 167
>Z70208-2|CAA94136.1| 304|Caenorhabditis elegans Hypothetical
protein F54B11.2 protein.
Length = 304
Score = 29.5 bits (63), Expect = 3.5
Identities = 29/106 (27%), Positives = 30/106 (28%), Gaps = 3/106 (2%)
Frame = +1
Query: 475 GXXXPPGXGGWXXGXPPVPPPXXPXP--PAVRXGGXXXAPPRXXIRXXPEPGDTPGXTXX 648
G PG G PPP P P P G A P P P
Sbjct: 130 GNPGAPGKGAAVPCEAKTPPPCKPCPAGPPGPPGPDGPAGPAGPDGEAGSPA-APSPPGP 188
Query: 649 PXGXQRAGTXKKGXVAG-XXPXGPAPXXEXPKNXPPXXXGXRTPXG 783
P AG AG P GPA P+ P G P G
Sbjct: 189 PGPSGPAGPAGNDGAAGTPGPDGPAGESTYPEPAAPGPAGPPGPAG 234
>Z68335-1|CAA92729.1| 299|Caenorhabditis elegans Hypothetical
protein C29F4.1 protein.
Length = 299
Score = 29.5 bits (63), Expect = 3.5
Identities = 22/73 (30%), Positives = 27/73 (36%), Gaps = 2/73 (2%)
Frame = +2
Query: 530 PXPXXPXPRPSGGGXXXXPPQGXXSGXPXNRGIPREXPXDXXAXKGPG-PXKRAXWXAXX 706
P P P G P Q G P N+G P + A PG P + A
Sbjct: 156 PGPAGPAGDAGANGNPGAPGQDGQPGAPGNKG-PSGPNGNPGAPGAPGQPGQDAPSEPIT 214
Query: 707 PXAP-PPXPSXPK 742
P AP P P+ P+
Sbjct: 215 PGAPGPAGPAGPQ 227
Score = 28.3 bits (60), Expect = 8.1
Identities = 17/62 (27%), Positives = 22/62 (35%)
Frame = +3
Query: 597 GNPVXPXTGGYPGKXXXTXXPPKGRDPEKGPXGXRFXXRPRPPXRASQKXAPPXXGXANP 776
GNP P G PG+ + G GP G + +P P + P G P
Sbjct: 193 GNPGAPGAPGQPGQDAPSEPITPGAPGPAGPAGPQ--GQPGAPGQPGHDGQPGAPGPKGP 250
Query: 777 XG 782
G
Sbjct: 251 NG 252
>Z54238-1|CAA90992.2| 281|Caenorhabditis elegans Hypothetical
protein T28C6.1 protein.
Length = 281
Score = 29.5 bits (63), Expect = 3.5
Identities = 17/55 (30%), Positives = 20/55 (36%)
Frame = -2
Query: 650 GXXVFPGVSPGSGXNRIXXLGGAXXXPPXRTAGGXGXXGGGTGGXPXXQPPXPGG 486
G +F G GSG GG+ G G GGG GG + GG
Sbjct: 19 GDGLFGGSDAGSGIGSSGGWGGSDASAGASAGGTGGGRGGGRGGSGGGRGGGSGG 73
>V00147-1|CAA23463.1| 296|Caenorhabditis elegans protein (
Caenorhabditis elegansgene Col-1 coding for a collagen.
).
Length = 296
Score = 29.5 bits (63), Expect = 3.5
Identities = 18/65 (27%), Positives = 20/65 (30%)
Frame = +2
Query: 545 PXPRPSGGGXXXXPPQGXXSGXPXNRGIPREXPXDXXAXKGPGPXKRAXWXAXXPXAPPP 724
P P P G P + G P G P + P P P K P PP
Sbjct: 99 PGP-PGPAGAPGKPGKPGRPGAPGTPGTPGKPPVAPCEPTTPPPCKPCPQGPPGPPGPPG 157
Query: 725 XPSXP 739
P P
Sbjct: 158 APGDP 162
Score = 29.1 bits (62), Expect = 4.6
Identities = 21/66 (31%), Positives = 23/66 (34%)
Frame = +3
Query: 585 PPKGGNPVXPXTGGYPGKXXXTXXPPKGRDPEKGPXGXRFXXRPRPPXRASQKXAPPXXG 764
P G P P G PG P G D GP G + P P A + PP G
Sbjct: 209 PLTPGAPGEPGDSGPPGPPGPPGAP--GNDGPPGPPGPKGAPGPDGPPGADGQSGPP--G 264
Query: 765 XANPXG 782
P G
Sbjct: 265 PPGPAG 270
>U58736-1|AAB00598.1| 302|Caenorhabditis elegans Dumpy : shorter
than wild-typeprotein 3 protein.
Length = 302
Score = 29.5 bits (63), Expect = 3.5
Identities = 20/58 (34%), Positives = 22/58 (37%), Gaps = 1/58 (1%)
Frame = +3
Query: 612 PXTGGYPGKXXXTXXPPKGRDPEKGPXGXRFXXRPRPPXR-ASQKXAPPXXGXANPXG 782
P G PG+ P GR GP G P PP + QK P G A P G
Sbjct: 113 PGPPGPPGRDGRPGAP--GRPGNPGPPGRDGALLPGPPPKPPCQKCPPGPPGPAGPPG 168
>J01047-1|AAA27988.1| 296|Caenorhabditis elegans protein (
C.elegans (nematode)collagen 1 (col-1) gene, complete
cds. ).
Length = 296
Score = 29.5 bits (63), Expect = 3.5
Identities = 18/65 (27%), Positives = 20/65 (30%)
Frame = +2
Query: 545 PXPRPSGGGXXXXPPQGXXSGXPXNRGIPREXPXDXXAXKGPGPXKRAXWXAXXPXAPPP 724
P P P G P + G P G P + P P P K P PP
Sbjct: 99 PGP-PGPAGAPGKPGKPGRPGAPGTPGTPGKPPVAPCEPTTPPPCKPCPQGPPGPPGPPG 157
Query: 725 XPSXP 739
P P
Sbjct: 158 APGDP 162
Score = 29.1 bits (62), Expect = 4.6
Identities = 21/66 (31%), Positives = 23/66 (34%)
Frame = +3
Query: 585 PPKGGNPVXPXTGGYPGKXXXTXXPPKGRDPEKGPXGXRFXXRPRPPXRASQKXAPPXXG 764
P G P P G PG P G D GP G + P P A + PP G
Sbjct: 209 PLTPGAPGEPGDSGPPGPPGPPGAP--GNDGPPGPPGPKGAPGPDGPPGADGQSGPP--G 264
Query: 765 XANPXG 782
P G
Sbjct: 265 PPGPAG 270
>AL132860-21|CAB60518.2| 759|Caenorhabditis elegans Hypothetical
protein Y56A3A.27 protein.
Length = 759
Score = 29.5 bits (63), Expect = 3.5
Identities = 20/54 (37%), Positives = 21/54 (38%), Gaps = 1/54 (1%)
Frame = +1
Query: 475 GXXXPPGXGGWXXGXPPVPPPXXPXPPAVRXGGXXXAPPRXXIRXXPEPG-DTP 633
G PP G G P PP P PPA G PPR I + G D P
Sbjct: 623 GGGGPPRGPGGGGGGGPTGPPAPPKPPAKPRG----RPPRKSISPAVKNGHDDP 672
>AF057032-1|AAC13567.1| 759|Caenorhabditis elegans DNA
topoisomerase III protein.
Length = 759
Score = 29.5 bits (63), Expect = 3.5
Identities = 20/54 (37%), Positives = 21/54 (38%), Gaps = 1/54 (1%)
Frame = +1
Query: 475 GXXXPPGXGGWXXGXPPVPPPXXPXPPAVRXGGXXXAPPRXXIRXXPEPG-DTP 633
G PP G G P PP P PPA G PPR I + G D P
Sbjct: 623 GGGGPPRGPGGGGGGGPTGPPAPPKPPAKPRG----RPPRKSISPAVKNGHDDP 672
>Z78013-1|CAB01425.3| 1140|Caenorhabditis elegans Hypothetical
protein F15B9.4 protein.
Length = 1140
Score = 23.8 bits (49), Expect(2) = 3.8
Identities = 9/17 (52%), Positives = 9/17 (52%)
Frame = +1
Query: 487 PPGXGGWXXGXPPVPPP 537
PP G G PP PPP
Sbjct: 540 PPPPVGMANGGPPPPPP 556
Score = 23.8 bits (49), Expect(2) = 3.8
Identities = 10/20 (50%), Positives = 11/20 (55%)
Frame = +1
Query: 514 GXPPVPPPXXPXPPAVRXGG 573
G PP PPP P PP+ G
Sbjct: 574 GGPPPPPP--PPPPSFMFNG 591
>Z49069-2|CAA88865.1| 333|Caenorhabditis elegans Hypothetical
protein K12D12.3 protein.
Length = 333
Score = 29.1 bits (62), Expect = 4.6
Identities = 17/42 (40%), Positives = 18/42 (42%)
Frame = +3
Query: 597 GNPVXPXTGGYPGKXXXTXXPPKGRDPEKGPXGXRFXXRPRP 722
GNP P G PG P GR EKG G + RP P
Sbjct: 205 GNPGHPGEMGAPGPQGKQG--PDGRQGEKGADGRKPIGRPGP 244
>J05067-1|AAB59179.1| 313|Caenorhabditis elegans clb-2 protein.
Length = 313
Score = 29.1 bits (62), Expect = 4.6
Identities = 13/30 (43%), Positives = 14/30 (46%)
Frame = +3
Query: 585 PPKGGNPVXPXTGGYPGKXXXTXXPPKGRD 674
P K G P P T GYPG + P G D
Sbjct: 27 PGKAGYPGAPGTDGYPGPPGLSGMPGHGGD 56
>AF098500-3|ABD94103.1| 774|Caenorhabditis elegans Temporarily
assigned gene nameprotein 343, isoform b protein.
Length = 774
Score = 29.1 bits (62), Expect = 4.6
Identities = 13/38 (34%), Positives = 15/38 (39%)
Frame = +1
Query: 520 PPVPPPXXPXPPAVRXGGXXXAPPRXXIRXXPEPGDTP 633
PP+PPP P PP+ IR P P P
Sbjct: 73 PPLPPPPLPLSNPPAKPTPPPPPPKPTIRPPPIPASPP 110
>AF098500-2|AAC67399.2| 996|Caenorhabditis elegans Temporarily
assigned gene nameprotein 343, isoform a protein.
Length = 996
Score = 29.1 bits (62), Expect = 4.6
Identities = 13/38 (34%), Positives = 15/38 (39%)
Frame = +1
Query: 520 PPVPPPXXPXPPAVRXGGXXXAPPRXXIRXXPEPGDTP 633
PP+PPP P PP+ IR P P P
Sbjct: 295 PPLPPPPLPLSNPPAKPTPPPPPPKPTIRPPPIPASPP 332
>Z98866-26|CAM33505.1| 559|Caenorhabditis elegans Hypothetical
protein Y49E10.29 protein.
Length = 559
Score = 28.7 bits (61), Expect = 6.1
Identities = 18/57 (31%), Positives = 23/57 (40%), Gaps = 1/57 (1%)
Frame = +3
Query: 585 PPKGGNPVXPXTGGYPGKXXXTXXPPKGRDPEKGPXGXRFXXRPRP-PXRASQKXAP 752
PP NP P P T PPK P++ P + +P P P +QK P
Sbjct: 375 PPVRQNPPMPAVQQAPSSQQATQAPPKPA-PQQAPPVQQNPPKPTPSPAPPAQKAQP 430
>U80451-9|AAB37843.1| 285|Caenorhabditis elegans Collagen protein
73 protein.
Length = 285
Score = 28.7 bits (61), Expect = 6.1
Identities = 26/100 (26%), Positives = 30/100 (30%), Gaps = 3/100 (3%)
Frame = +1
Query: 475 GXXXPPGXGG--WXXGXPPVPPPXXPXPPAVRXGGXXXAPPRXXIRXXPEPGDTPGXTXX 648
G PG G G P P P P A G +R P P PG
Sbjct: 159 GQPGAPGEQGPNGRPGAPGAPGPQGPPGTAGNDGTPGQPGAPGQVRTVPAPPGNPGQPGE 218
Query: 649 PXGXQRAGTXKKGXVAGXXPXG-PAPXXEXPKNXPPXXXG 765
P G + G P G P P E ++ P G
Sbjct: 219 PGAQGPPG--EDGRPGNSGPQGPPGPQGEPGQDGAPGNPG 256
>U61948-2|AAB03143.2| 345|Caenorhabditis elegans Collagen protein
14 protein.
Length = 345
Score = 28.7 bits (61), Expect = 6.1
Identities = 30/107 (28%), Positives = 33/107 (30%), Gaps = 3/107 (2%)
Frame = +1
Query: 487 PPGXGGWXXGXPPVPPPXXPXPPAVRXGGXXXAPPRXXIRXXPEPGDTPGXTXXPXGXQR 666
PPG GG PP P P A G P R P PG P
Sbjct: 205 PPGDGG-----PPGQPGPDGPPGAPGNAGEDGKPGDQGPRGPPGIPGAPGQPGRPGPPGE 259
Query: 667 AGTXK-KGXVAG--XXPXGPAPXXEXPKNXPPXXXGXRTPXGLXXIP 798
GT K + AG P P P + PP G G +P
Sbjct: 260 PGTYKTEVGPAGRAGAPGRPGPPGQPGPAGPPGENGKGGGQGPSGLP 306
>U10438-9|AAU87834.1| 616|Caenorhabditis elegans Hypothetical
protein B0280.13 protein.
Length = 616
Score = 28.7 bits (61), Expect = 6.1
Identities = 13/33 (39%), Positives = 15/33 (45%)
Frame = +1
Query: 520 PPVPPPXXPXPPAVRXGGXXXAPPRXXIRXXPE 618
PP PPP P PPA+ PP + PE
Sbjct: 512 PPPPPPPPPPPPALEQ--EISGPPTVRLTAVPE 542
>M25480-1|AAA27986.1| 326|Caenorhabditis elegans collagen protein.
Length = 326
Score = 28.7 bits (61), Expect = 6.1
Identities = 30/107 (28%), Positives = 33/107 (30%), Gaps = 3/107 (2%)
Frame = +1
Query: 487 PPGXGGWXXGXPPVPPPXXPXPPAVRXGGXXXAPPRXXIRXXPEPGDTPGXTXXPXGXQR 666
PPG GG PP P P A G P R P PG P
Sbjct: 186 PPGDGG-----PPGQPGPDGPPGAPGNAGEDGKPGDQGPRGPPGIPGAPGQPGRPGPPGE 240
Query: 667 AGTXK-KGXVAG--XXPXGPAPXXEXPKNXPPXXXGXRTPXGLXXIP 798
GT K + AG P P P + PP G G +P
Sbjct: 241 PGTYKTEVGPAGRAGAPGRPGPPGQPGPAGPPGENGKGGGQGPSGLP 287
>AL033514-8|CAA22097.2| 715|Caenorhabditis elegans Hypothetical
protein Y75B8A.8 protein.
Length = 715
Score = 28.7 bits (61), Expect = 6.1
Identities = 12/23 (52%), Positives = 12/23 (52%)
Frame = -2
Query: 554 GGXGXXGGGTGGXPXXQPPXPGG 486
GG G GGG P QPP P G
Sbjct: 13 GGAGGGGGGPPRGPPQQPPQPQG 35
>Z81053-1|CAB02877.1| 385|Caenorhabditis elegans Hypothetical
protein E02A10.2 protein.
Length = 385
Score = 28.3 bits (60), Expect = 8.1
Identities = 16/40 (40%), Positives = 16/40 (40%), Gaps = 2/40 (5%)
Frame = -2
Query: 632 GVSPGSGXNRIXXLGG--AXXXPPXRTAGGXGXXGGGTGG 519
G G G GG A PP GG G GGG GG
Sbjct: 35 GCGGGGGCGGGGGCGGGCAPPPPPPACGGGCGGGGGGCGG 74
>Z77662-15|CAI79240.1| 255|Caenorhabditis elegans Hypothetical
protein F47B8.14 protein.
Length = 255
Score = 28.3 bits (60), Expect = 8.1
Identities = 12/27 (44%), Positives = 12/27 (44%)
Frame = -2
Query: 554 GGXGXXGGGTGGXPXXQPPXPGGXXXP 474
GG G GGG GG PP P P
Sbjct: 25 GGGGYSGGGGGGGDAAPPPPPPADAAP 51
>Z70284-9|CAA94280.1| 290|Caenorhabditis elegans Hypothetical
protein K07F5.11 protein.
Length = 290
Score = 28.3 bits (60), Expect = 8.1
Identities = 15/39 (38%), Positives = 17/39 (43%), Gaps = 1/39 (2%)
Frame = -2
Query: 632 GVSPGSGXNRIXXLGGAXXXPPXRTA-GGXGXXGGGTGG 519
G P G +GGA PP + G G GGG GG
Sbjct: 24 GGGPAGGGGGASKVGGAGAPPPGTSVYMGAGAGGGGGGG 62
>U55366-4|AAA97982.1| 310|Caenorhabditis elegans Collagen protein
139 protein.
Length = 310
Score = 28.3 bits (60), Expect = 8.1
Identities = 24/93 (25%), Positives = 28/93 (30%)
Frame = +1
Query: 487 PPGXGGWXXGXPPVPPPXXPXPPAVRXGGXXXAPPRXXIRXXPEPGDTPGXTXXPXGXQR 666
PPG G P P P V GG AP P P PG P +
Sbjct: 159 PPGPAGEPGHDGAPGAPGKPGAPGV--GGGSGAP------GAPGPKGAPGGPGQPGRDGQ 210
Query: 667 AGTXKKGXVAGXXPXGPAPXXEXPKNXPPXXXG 765
G + + P P P + PP G
Sbjct: 211 PGQAGQPGSSSSEPGQPGPNGQPGPRGPPGQAG 243
>U41557-2|AAA83301.1| 309|Caenorhabditis elegans Hypothetical
protein C50F7.5 protein.
Length = 309
Score = 28.3 bits (60), Expect = 8.1
Identities = 15/36 (41%), Positives = 15/36 (41%)
Frame = +1
Query: 487 PPGXGGWXXGXPPVPPPXXPXPPAVRXGGXXXAPPR 594
PPG G G P PP P PP R G P R
Sbjct: 243 PPGPPG-PPGPPTRRPPGPPGPPTRRPPGPPGPPTR 277
>U39666-1|AAA80412.2| 644|Caenorhabditis elegans Nematode astacin
protease protein33 protein.
Length = 644
Score = 28.3 bits (60), Expect = 8.1
Identities = 16/52 (30%), Positives = 19/52 (36%)
Frame = +2
Query: 587 PQGXXSGXPXNRGIPREXPXDXXAXKGPGPXKRAXWXAXXPXAPPPXPSXPK 742
P G NRG P P + P P +R W P PP P P+
Sbjct: 37 PWGPPPPWHRNRGPPPFGPPPPW-DRPPPPWRRPPWHRRPPWGLPPPPPPPE 87
>U23172-13|ABH03527.1| 282|Caenorhabditis elegans Hypothetical
protein F25B5.7c protein.
Length = 282
Score = 28.3 bits (60), Expect = 8.1
Identities = 34/101 (33%), Positives = 35/101 (34%), Gaps = 13/101 (12%)
Frame = -2
Query: 737 GXSXXGAGPXGKXPATXPFFXVPALWXPXGXXVFPGVSP---GSGXNRIXXLGGAXXXP- 570
G S G GP G P P F P P G P P G G + GG P
Sbjct: 120 GGSMFG-GPGG--PGGPPPFGQPFQQAPQGMFNVPTGPPPLMGGGGDPRGPPGGMGGPPG 176
Query: 569 ------PXRTAGGXGXXG-GGTGGXPXXQ--PPXPGGXXXP 474
P G G G GG GG P Q P PGG P
Sbjct: 177 HGGMGGPPGHGGQGGPPGHGGMGGPPPGQGGPGGPGGPGGP 217
>U23172-12|ABH03526.1| 562|Caenorhabditis elegans Hypothetical
protein F25B5.7a protein.
Length = 562
Score = 28.3 bits (60), Expect = 8.1
Identities = 34/101 (33%), Positives = 35/101 (34%), Gaps = 13/101 (12%)
Frame = -2
Query: 737 GXSXXGAGPXGKXPATXPFFXVPALWXPXGXXVFPGVSP---GSGXNRIXXLGGAXXXP- 570
G S G GP G P P F P P G P P G G + GG P
Sbjct: 400 GGSMFG-GPGG--PGGPPPFGQPFQQAPQGMFNVPTGPPPLMGGGGDPRGPPGGMGGPPG 456
Query: 569 ------PXRTAGGXGXXG-GGTGGXPXXQ--PPXPGGXXXP 474
P G G G GG GG P Q P PGG P
Sbjct: 457 HGGMGGPPGHGGQGGPPGHGGMGGPPPGQGGPGGPGGPGGP 497
>AF039052-9|AAF98625.1| 302|Caenorhabditis elegans Hypothetical
protein T22D1.2 protein.
Length = 302
Score = 28.3 bits (60), Expect = 8.1
Identities = 28/111 (25%), Positives = 34/111 (30%), Gaps = 16/111 (14%)
Frame = +3
Query: 480 RPPPGXXXLAXGAPSRSPXXXXXXXXXXXXXXXXXPPKG-GNPVXPXTG--------GY- 629
RPPP P + PPKG G P P TG GY
Sbjct: 157 RPPPPPKGTGSPPPPPTGEPQDLSTEGNASRRPPPPPKGTGTPPPPPTGEPQDLSAEGYA 216
Query: 630 ------PGKXXXTXXPPKGRDPEKGPXGXRFXXRPRPPXRASQKXAPPXXG 764
P K + PP +P+ RP PP + + PP G
Sbjct: 217 SRRPPPPPKGTGSPTPPPTGEPQDLSGEGNASRRPPPPPKGTGSPPPPPTG 267
>AC024798-8|AAK29921.3| 1115|Caenorhabditis elegans Hypothetical
protein Y48G9A.4 protein.
Length = 1115
Score = 28.3 bits (60), Expect = 8.1
Identities = 16/54 (29%), Positives = 18/54 (33%)
Frame = +1
Query: 523 PVPPPXXPXPPAVRXGGXXXAPPRXXIRXXPEPGDTPGXTXXPXGXQRAGTXKK 684
P+PPP P P G PP + P P P A T KK
Sbjct: 559 PIPPPPPPPLPQNLSGAPPPPPPPPPMLGGPPPPPPPPGGLMGPASNDAKTIKK 612
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,043,366
Number of Sequences: 27780
Number of extensions: 294935
Number of successful extensions: 2367
Number of sequences better than 10.0: 85
Number of HSP's better than 10.0 without gapping: 798
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1872
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2328783996
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -