Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP26_F_F08
         (875 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

12_01_0039 - 319871-319914,320021-320084,320198-320263,320397-32...    59   4e-09
11_01_0040 - 304439-304482,304589-304652,304766-304831,305509-30...    52   5e-07
06_03_0906 - 25846424-25846462,25846640-25847014,25847105-258471...    29   4.9  
02_05_0624 - 30451032-30451140,30451294-30451409,30451506-304515...    29   4.9  
02_05_1214 + 34976814-34979813                                         29   6.5  
05_03_0520 + 14956476-14958179                                         28   8.5  
03_02_0471 + 8734292-8734788,8735168-8735654,8735766-8736551           28   8.5  
02_01_0485 + 3487578-3487635,3488281-3488399,3488600-3488698,348...    28   8.5  

>12_01_0039 -
           319871-319914,320021-320084,320198-320263,320397-320458,
           321211-321298,321401-321461,321542-321625,322332-322630
          Length = 255

 Score = 59.3 bits (137), Expect = 4e-09
 Identities = 44/122 (36%), Positives = 59/122 (48%), Gaps = 3/122 (2%)
 Frame = +3

Query: 351 CYNMMRKQIQEEVAASIQYLAMGAYFSIDTVNRPGFAKLFFDAATEEREHATKLIDYLLM 530
           C   + +QI  E  AS  Y ++ AYF  D V   GFAK F +++ EER+HA KL+ Y  M
Sbjct: 91  CEAAISEQINVEFNASYAYHSLFAYFDRDNVALKGFAKFFKESSDEERDHAEKLMKYQNM 150

Query: 531 RG---KLTGSVTDLITYRAPANTSWESGASALEHALKLESDVTNSIREVIKTCESSFNDY 701
           RG   +L   VT L  +  P          A+E AL LE  V   +   + +  S  ND 
Sbjct: 151 RGGRVRLQSIVTPLTEFDHPEK---GDALYAMELALALEKLVNEKLHN-LHSVASRCNDP 206

Query: 702 HL 707
            L
Sbjct: 207 QL 208


>11_01_0040 -
           304439-304482,304589-304652,304766-304831,305509-305640,
           305744-305804,305885-306018,306310-306654
          Length = 281

 Score = 52.4 bits (120), Expect = 5e-07
 Identities = 31/69 (44%), Positives = 39/69 (56%), Gaps = 3/69 (4%)
 Frame = +3

Query: 384 EVAASIQYLAMGAYFSIDTVNRPGFAKLFFDAATEEREHATKLIDYLLMRG---KLTGSV 554
           E  AS  Y ++ AYF  D V   GFAK F +++ EER+HA KLI Y  MRG   +L   V
Sbjct: 134 EYNASYAYHSLFAYFDRDNVALKGFAKFFKESSDEERDHAEKLIKYQNMRGGRVRLQSIV 193

Query: 555 TDLITYRAP 581
           T L  +  P
Sbjct: 194 TPLTEFDHP 202


>06_03_0906 -
           25846424-25846462,25846640-25847014,25847105-25847139,
           25847283-25847382,25847476-25847553,25847628-25847678,
           25847804-25847929,25848021-25848138,25848476-25848483
          Length = 309

 Score = 29.1 bits (62), Expect = 4.9
 Identities = 13/36 (36%), Positives = 19/36 (52%)
 Frame = +1

Query: 724 GGIPRRTVQGPTRPRRQGLDPQEDDGQTRRPRKSSS 831
           G + R+T +      + G D  EDDG+T  P K S+
Sbjct: 240 GALSRKTRKNGGGKEKPGSDYSEDDGETAEPNKVST 275


>02_05_0624 -
           30451032-30451140,30451294-30451409,30451506-30451580,
           30452033-30452093,30452198-30452424
          Length = 195

 Score = 29.1 bits (62), Expect = 4.9
 Identities = 16/39 (41%), Positives = 21/39 (53%)
 Frame = +3

Query: 411 AMGAYFSIDTVNRPGFAKLFFDAATEEREHATKLIDYLL 527
           A+  YF + TV  P  A  FF +   +RE  T L+D LL
Sbjct: 115 ALPKYFQVGTVIEP--ASEFFSSRLTKRERKTTLVDELL 151


>02_05_1214 + 34976814-34979813
          Length = 999

 Score = 28.7 bits (61), Expect = 6.5
 Identities = 14/32 (43%), Positives = 18/32 (56%)
 Frame = +2

Query: 674 DLREQLQRLPPGSTICPGEFLDEQYKGQRDLA 769
           DL E  +R PP ST+ P   + E  KG+R  A
Sbjct: 335 DLSEVPRRAPPDSTLAPQWHIMEDRKGERGAA 366


>05_03_0520 + 14956476-14958179
          Length = 567

 Score = 28.3 bits (60), Expect = 8.5
 Identities = 16/54 (29%), Positives = 25/54 (46%)
 Frame = +2

Query: 644 RHQQHPGGHQDLREQLQRLPPGSTICPGEFLDEQYKGQRDLAGKASTLKKMMDK 805
           R  Q PG H D   +LQ  PP  ++     L+E+      + G AS + +  D+
Sbjct: 173 REPQCPGAHGDDDGELQCAPPPRSMAETALLEERGPLPHPVLGPASVVDQCTDQ 226


>03_02_0471 + 8734292-8734788,8735168-8735654,8735766-8736551
          Length = 589

 Score = 28.3 bits (60), Expect = 8.5
 Identities = 15/38 (39%), Positives = 20/38 (52%)
 Frame = +3

Query: 603 GASALEHALKLESDVTNSIREVIKTCESSFNDYHLXRL 716
           G   LE+     +D+TN+  E I T  SS ND+ L  L
Sbjct: 381 GCPHLEYWAVHVTDITNAALEAIGTYSSSLNDFRLVLL 418


>02_01_0485 +
           3487578-3487635,3488281-3488399,3488600-3488698,
           3488795-3488851,3488954-3489109,3489227-3489311,
           3489489-3489579,3489693-3489857,3489923-3490045,
           3490244-3490319,3490486-3490633,3490769-3491934,
           3492041-3492231,3492321-3492513
          Length = 908

 Score = 28.3 bits (60), Expect = 8.5
 Identities = 15/53 (28%), Positives = 28/53 (52%), Gaps = 1/53 (1%)
 Frame = +2

Query: 533 GKADRLRNRPHHVQGPRKHVVGERRISPRARPQAGE*R-HQQHPGGHQDLREQ 688
           G + +  ++P ++Q P +H        P+ +PQ  +   HQQ P  HQ +++Q
Sbjct: 502 GNSIQGHSQPEYLQQPLQHCQSFNEQKPQLQPQQQQQESHQQQP-QHQQMQQQ 553


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,444,643
Number of Sequences: 37544
Number of extensions: 444228
Number of successful extensions: 1218
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 1184
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1218
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2467979640
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)