Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP26_F_F08
(875 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF106592-2|AAK21364.1| 170|Caenorhabditis elegans Ferritin prot... 67 1e-11
AF016447-16|AAG24016.1| 170|Caenorhabditis elegans Ferritin pro... 55 6e-08
U39997-6|AAN60517.1| 942|Caenorhabditis elegans Clear protein 1... 31 1.4
U39997-5|AAN60515.1| 1409|Caenorhabditis elegans Clear protein 1... 31 1.4
U39997-4|AAN60516.1| 1444|Caenorhabditis elegans Clear protein 1... 31 1.4
AF047881-1|AAC27552.1| 942|Caenorhabditis elegans truncated CLR... 31 1.4
AF047880-1|AAC27551.1| 1409|Caenorhabditis elegans CLR-1 protein. 31 1.4
Z81094-7|CAB03153.2| 960|Caenorhabditis elegans Hypothetical pr... 29 4.4
>AF106592-2|AAK21364.1| 170|Caenorhabditis elegans Ferritin protein
2 protein.
Length = 170
Score = 67.3 bits (157), Expect = 1e-11
Identities = 45/115 (39%), Positives = 59/115 (51%)
Frame = +3
Query: 363 MRKQIQEEVAASIQYLAMGAYFSIDTVNRPGFAKLFFDAATEEREHATKLIDYLLMRGKL 542
+ KQI E+ AS YL+M YF D V P AK F + + EEREHAT+L+ +RG
Sbjct: 16 VNKQINIELYASYVYLSMSFYFDRDDVALPNIAKFFKEQSDEEREHATELMRVQNLRG-- 73
Query: 543 TGSVTDLITYRAPANTSWESGASALEHALKLESDVTNSIREVIKTCESSFNDYHL 707
G V L + P N W + A E AL LE S+ ++ T + ND HL
Sbjct: 74 -GRVV-LQDIQKPENDEWGTALKAFEAALALEKFNNESLLKLHSTA-GNHNDAHL 125
>AF016447-16|AAG24016.1| 170|Caenorhabditis elegans Ferritin
protein 1 protein.
Length = 170
Score = 55.2 bits (127), Expect = 6e-08
Identities = 40/115 (34%), Positives = 56/115 (48%)
Frame = +3
Query: 363 MRKQIQEEVAASIQYLAMGAYFSIDTVNRPGFAKLFFDAATEEREHATKLIDYLLMRGKL 542
+ KQI E+ AS YL+M A+F D + AK F + + EER HAT+L+ +RG
Sbjct: 16 VNKQINVELYASYVYLSMSAHFDRDDIALRNIAKFFKEQSDEERGHATELMRIQAVRG-- 73
Query: 543 TGSVTDLITYRAPANTSWESGASALEHALKLESDVTNSIREVIKTCESSFNDYHL 707
G V + + P W + A E AL LE S+ ++ E ND HL
Sbjct: 74 -GRVA-MQNIQKPEKDEWGTVLEAFEAALALERANNASLLKLHGIAEQR-NDAHL 125
>U39997-6|AAN60517.1| 942|Caenorhabditis elegans Clear protein 1,
isoform c protein.
Length = 942
Score = 30.7 bits (66), Expect = 1.4
Identities = 19/56 (33%), Positives = 28/56 (50%), Gaps = 3/56 (5%)
Frame = +2
Query: 716 ICPGEFLDEQYKG-QRDLAGKASTLKKMMDKH--AALGRVHLSTXNSSGLNV*IFC 874
+CP +F D Q+ L ++ L DK A + R H ST S G++V +FC
Sbjct: 134 VCPPQFDDVHVTANQKPLRLNSTLLPTKCDKRDLAVVARAHPSTSVSKGIDVTLFC 189
>U39997-5|AAN60515.1| 1409|Caenorhabditis elegans Clear protein 1,
isoform a protein.
Length = 1409
Score = 30.7 bits (66), Expect = 1.4
Identities = 19/56 (33%), Positives = 28/56 (50%), Gaps = 3/56 (5%)
Frame = +2
Query: 716 ICPGEFLDEQYKG-QRDLAGKASTLKKMMDKH--AALGRVHLSTXNSSGLNV*IFC 874
+CP +F D Q+ L ++ L DK A + R H ST S G++V +FC
Sbjct: 134 VCPPQFDDVHVTANQKPLRLNSTLLPTKCDKRDLAVVARAHPSTSVSKGIDVTLFC 189
>U39997-4|AAN60516.1| 1444|Caenorhabditis elegans Clear protein 1,
isoform b protein.
Length = 1444
Score = 30.7 bits (66), Expect = 1.4
Identities = 19/56 (33%), Positives = 28/56 (50%), Gaps = 3/56 (5%)
Frame = +2
Query: 716 ICPGEFLDEQYKG-QRDLAGKASTLKKMMDKH--AALGRVHLSTXNSSGLNV*IFC 874
+CP +F D Q+ L ++ L DK A + R H ST S G++V +FC
Sbjct: 134 VCPPQFDDVHVTANQKPLRLNSTLLPTKCDKRDLAVVARAHPSTSVSKGIDVTLFC 189
>AF047881-1|AAC27552.1| 942|Caenorhabditis elegans truncated CLR-1
protein.
Length = 942
Score = 30.7 bits (66), Expect = 1.4
Identities = 19/56 (33%), Positives = 28/56 (50%), Gaps = 3/56 (5%)
Frame = +2
Query: 716 ICPGEFLDEQYKG-QRDLAGKASTLKKMMDKH--AALGRVHLSTXNSSGLNV*IFC 874
+CP +F D Q+ L ++ L DK A + R H ST S G++V +FC
Sbjct: 134 VCPPQFDDVHVTANQKPLRLNSTLLPTKCDKRDLAVVARAHPSTSVSKGIDVTLFC 189
>AF047880-1|AAC27551.1| 1409|Caenorhabditis elegans CLR-1 protein.
Length = 1409
Score = 30.7 bits (66), Expect = 1.4
Identities = 19/56 (33%), Positives = 28/56 (50%), Gaps = 3/56 (5%)
Frame = +2
Query: 716 ICPGEFLDEQYKG-QRDLAGKASTLKKMMDKH--AALGRVHLSTXNSSGLNV*IFC 874
+CP +F D Q+ L ++ L DK A + R H ST S G++V +FC
Sbjct: 134 VCPPQFDDVHVTANQKPLRLNSTLLPTKCDKRDLAVVARAHPSTSVSKGIDVTLFC 189
>Z81094-7|CAB03153.2| 960|Caenorhabditis elegans Hypothetical
protein F58G11.2 protein.
Length = 960
Score = 29.1 bits (62), Expect = 4.4
Identities = 23/73 (31%), Positives = 33/73 (45%), Gaps = 4/73 (5%)
Frame = +2
Query: 557 RPHH----VQGPRKHVVGERRISPRARPQAGE*RHQQHPGGHQDLREQLQRLPPGSTICP 724
R HH PR H G+ R S A + + R+ H GGH R Q G+
Sbjct: 198 RDHHNYNSQSSPRSHQGGQDRYS--APKEDNQRRYDNHQGGHDSYRGQNSGGYSGNN--S 253
Query: 725 GEFLDEQYKGQRD 763
GE+ ++ Y+ Q+D
Sbjct: 254 GEYRND-YRSQQD 265
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,309,913
Number of Sequences: 27780
Number of extensions: 346723
Number of successful extensions: 913
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 873
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 913
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2202903780
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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