Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP26_F_F08
         (875 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB244761-1|BAE66603.1|  504|Apis mellifera cystathionine beta-sy...    27   0.23 
AJ968562-1|CAI91546.1|  998|Apis mellifera protein ( Apis mellif...    25   0.92 
DQ026038-1|AAY87897.1|  520|Apis mellifera nicotinic acetylcholi...    23   2.8  
AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.             23   4.9  
AM050259-1|CAJ18340.1|  683|Apis mellifera putative H3K9 methylt...    22   6.5  

>AB244761-1|BAE66603.1|  504|Apis mellifera cystathionine
           beta-synthase protein.
          Length = 504

 Score = 27.1 bits (57), Expect = 0.23
 Identities = 11/29 (37%), Positives = 16/29 (55%)
 Frame = +3

Query: 573 RAPANTSWESGASALEHALKLESDVTNSI 659
           R P   SW S  + +  A KL+ ++ NSI
Sbjct: 149 RTPTEASWHSPEAHISVAQKLQKEIPNSI 177


>AJ968562-1|CAI91546.1|  998|Apis mellifera protein ( Apis mellifera
           ORF for hypotheticalprotein. ).
          Length = 998

 Score = 25.0 bits (52), Expect = 0.92
 Identities = 14/39 (35%), Positives = 18/39 (46%)
 Frame = +2

Query: 743 QYKGQRDLAGKASTLKKMMDKHAALGRVHLSTXNSSGLN 859
           Q + Q D+  K   L   M+     GRVH+S    S LN
Sbjct: 381 QRQWQFDVYSKDVELANKMESSGMAGRVHISNATLSFLN 419


>DQ026038-1|AAY87897.1|  520|Apis mellifera nicotinic acetylcholine
           receptor beta1subunit protein.
          Length = 520

 Score = 23.4 bits (48), Expect = 2.8
 Identities = 11/36 (30%), Positives = 21/36 (58%)
 Frame = -2

Query: 661 RMLLVTSLSSLRACSRADAPLSHDVFAGALYVMRSV 554
           R+LL++++  +  CS  +  L  D+F G   ++R V
Sbjct: 10  RILLISAVFCVGLCSEDEERLVRDLFRGYNKLIRPV 45


>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
          Length = 1598

 Score = 22.6 bits (46), Expect = 4.9
 Identities = 14/53 (26%), Positives = 25/53 (47%)
 Frame = +2

Query: 551 RNRPHHVQGPRKHVVGERRISPRARPQAGE*RHQQHPGGHQDLREQLQRLPPG 709
           +++P H Q    H     +   +A+PQ  + + QQ P   Q  ++Q Q+   G
Sbjct: 806 QSQPPHQQ-LHHHQSTHPQAQAQAQPQQQQQQQQQQPQQQQQQQQQQQQQQRG 857


>AM050259-1|CAJ18340.1|  683|Apis mellifera putative H3K9
           methyltransferase protein.
          Length = 683

 Score = 22.2 bits (45), Expect = 6.5
 Identities = 10/24 (41%), Positives = 11/24 (45%)
 Frame = +2

Query: 77  ANRTYLFEFPANYKSPSAPVCVKA 148
           A RTYLF+   N      P  V A
Sbjct: 545 AGRTYLFDLDYNESEEQCPYTVDA 568


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 212,277
Number of Sequences: 438
Number of extensions: 4365
Number of successful extensions: 13
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 28402218
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)