Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP26_F_F05
         (897 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

10_02_0040 + 4482853-4482988,4483111-4483224,4485372-4485514          172   3e-43
03_02_0370 + 7853646-7853772,7854508-7854621,7855152-7855294          171   5e-43
06_01_0239 - 1819316-1819458,1820578-1820691,1820794-1820923          169   2e-42
03_02_0020 - 5045900-5046211,5046233-5046290,5046604-5047242,504...    53   4e-07
11_06_0743 + 26847652-26849424                                         30   2.2  
07_01_0344 - 2490700-2493249                                           30   2.2  
06_02_0345 + 14833838-14833997,14834095-14834552,14834633-148348...    29   3.8  
05_05_0253 - 23632907-23633646,23633758-23635050,23636471-23636663     29   3.8  
12_02_0964 - 24860373-24860381,24860427-24860768,24861436-248615...    29   5.0  
11_03_0196 - 11490624-11490923,11493561-11493599,11494091-11494897     28   8.8  

>10_02_0040 + 4482853-4482988,4483111-4483224,4485372-4485514
          Length = 130

 Score =  172 bits (419), Expect = 3e-43
 Identities = 80/121 (66%), Positives = 99/121 (81%)
 Frame = +3

Query: 138 AAAVVSGKDIEKPQAEVSPIHRIRITLTSRNVRSLEKVCADLINGAKKQKLRVKGPVRMP 317
           A   + G  +   +A    ++RIRITL+S+NV++LEKVCADL+ GAK ++LRVKGPVR+P
Sbjct: 9   AGGAMKGGKLGMEEARELQLNRIRITLSSKNVKNLEKVCADLVKGAKDKQLRVKGPVRIP 68

Query: 318 TKILRITTRKTPCGEGSKTWDRFQMRIHKRVIDLHSPSEIVKQITSINIEPGVEVEVTIA 497
           TK+L ITTRK+PCGEG+ TWDRF+ RIHKRVIDL S  ++VKQITSI IEPGVEVEVTIA
Sbjct: 69  TKVLHITTRKSPCGEGTNTWDRFEFRIHKRVIDLISSPDVVKQITSITIEPGVEVEVTIA 128

Query: 498 D 500
           D
Sbjct: 129 D 129


>03_02_0370 + 7853646-7853772,7854508-7854621,7855152-7855294
          Length = 127

 Score =  171 bits (417), Expect = 5e-43
 Identities = 84/126 (66%), Positives = 102/126 (80%), Gaps = 4/126 (3%)
 Frame = +3

Query: 135 MAAAVV----SGKDIEKPQAEVSPIHRIRITLTSRNVRSLEKVCADLINGAKKQKLRVKG 302
           MAAA V     G  +   +A    ++RIRITL+S+NV++LEKVCADL+ GAK ++LRVKG
Sbjct: 1   MAAAAVYGGMKGGKLGVEEAHELQLNRIRITLSSKNVKNLEKVCADLVKGAKDKQLRVKG 60

Query: 303 PVRMPTKILRITTRKTPCGEGSKTWDRFQMRIHKRVIDLHSPSEIVKQITSINIEPGVEV 482
           PVR+PTK+L ITTRK+PCGEG+ TWDRF+ RIHKRVIDL S  ++VKQITSI IEPGVEV
Sbjct: 61  PVRIPTKVLHITTRKSPCGEGTNTWDRFEFRIHKRVIDLISSPDVVKQITSITIEPGVEV 120

Query: 483 EVTIAD 500
           EVTIAD
Sbjct: 121 EVTIAD 126


>06_01_0239 - 1819316-1819458,1820578-1820691,1820794-1820923
          Length = 128

 Score =  169 bits (412), Expect = 2e-42
 Identities = 81/121 (66%), Positives = 100/121 (82%)
 Frame = +3

Query: 138 AAAVVSGKDIEKPQAEVSPIHRIRITLTSRNVRSLEKVCADLINGAKKQKLRVKGPVRMP 317
           A  + SGK   +   EV   HRIRITL+S++V++LEKVC DL+ GAK + L+VKGPVRMP
Sbjct: 9   APPMKSGKIGFESSQEVQ--HRIRITLSSKSVKNLEKVCGDLVKGAKDKSLKVKGPVRMP 66

Query: 318 TKILRITTRKTPCGEGSKTWDRFQMRIHKRVIDLHSPSEIVKQITSINIEPGVEVEVTIA 497
           TK+L ITTRK+PCGEG+ TWDRF+MR+HKRVIDL S +++VKQITSI IEPGVEVEVTI+
Sbjct: 67  TKVLHITTRKSPCGEGTNTWDRFEMRVHKRVIDLVSSADVVKQITSITIEPGVEVEVTIS 126

Query: 498 D 500
           D
Sbjct: 127 D 127


>03_02_0020 -
           5045900-5046211,5046233-5046290,5046604-5047242,
           5048475-5048515,5048672-5048728,5048952-5049140
          Length = 431

 Score = 52.8 bits (121), Expect = 4e-07
 Identities = 31/104 (29%), Positives = 53/104 (50%), Gaps = 1/104 (0%)
 Frame = +3

Query: 186 VSPIHRIRITLTSRNVRSLEKVCADLINGAKKQKLRVKGPVRMPTKILRITTRKTPCGEG 365
           ++P  +IRI L S  V  +E  C  +I  AK    +  GPV +PTK        +P    
Sbjct: 329 LAPKQKIRIKLRSYWVPLIEDSCKKIIEAAKTTNAKTMGPVPLPTKRRVYCVLNSPHVHK 388

Query: 366 SKTWDRFQMRIHKRVIDLHSP-SEIVKQITSINIEPGVEVEVTI 494
              +  F++R H+R+ID+  P ++ +  +  + +  GV+VEV +
Sbjct: 389 DSRF-HFEIRTHQRLIDIMYPTAQTIDSLMQLQLPAGVDVEVKL 431


>11_06_0743 + 26847652-26849424
          Length = 590

 Score = 30.3 bits (65), Expect = 2.2
 Identities = 17/58 (29%), Positives = 21/58 (36%), Gaps = 1/58 (1%)
 Frame = +2

Query: 116 PEFNKQHGSRCSVRQRHR-ETPGRGLPYPPHQDHSYFSQCALTREGLC*PHQWSQETE 286
           PE  +    RCS R R R   P      PP  + +  +       G   PH WS   E
Sbjct: 296 PELRRARSGRCSPRCRRRARAPPSSSTSPPWPEPALPAAARTAAAGRSLPHSWSSRLE 353


>07_01_0344 - 2490700-2493249
          Length = 849

 Score = 30.3 bits (65), Expect = 2.2
 Identities = 12/22 (54%), Positives = 16/22 (72%)
 Frame = -3

Query: 202 RWIGETSAWGFSMSLPDTTAAA 137
           RWIG++S   F++SLP T A A
Sbjct: 46  RWIGDSSPKNFTLSLPGTVATA 67


>06_02_0345 +
           14833838-14833997,14834095-14834552,14834633-14834870,
           14834974-14835431,14836554-14836955
          Length = 571

 Score = 29.5 bits (63), Expect = 3.8
 Identities = 18/48 (37%), Positives = 23/48 (47%), Gaps = 5/48 (10%)
 Frame = +2

Query: 203 HQDHSYFSQCALTREGLC*PHQWSQETEAACKG--PSPH---ANQDPA 331
           H   S   +CAL R+G     +W  ET   C G  P+P     +QDPA
Sbjct: 11  HHLQSTLFECALLRDGRAESFEWLFETFKNCMGNCPTPRCILTDQDPA 58


>05_05_0253 - 23632907-23633646,23633758-23635050,23636471-23636663
          Length = 741

 Score = 29.5 bits (63), Expect = 3.8
 Identities = 15/38 (39%), Positives = 19/38 (50%)
 Frame = +2

Query: 131 QHGSRCSVRQRHRETPGRGLPYPPHQDHSYFSQCALTR 244
           +H SRCS R R R T       P  QD +  + CA T+
Sbjct: 676 RHSSRCSCRYRSRRTRSPSSLTPRDQDGTGDAGCATTK 713


>12_02_0964 -
           24860373-24860381,24860427-24860768,24861436-24861583,
           24862070-24862089
          Length = 172

 Score = 29.1 bits (62), Expect = 5.0
 Identities = 14/35 (40%), Positives = 17/35 (48%)
 Frame = +2

Query: 110 SRPEFNKQHGSRCSVRQRHRETPGRGLPYPPHQDH 214
           +RPE     GSR + R+  R   G   P PPH  H
Sbjct: 90  ARPEAAAGGGSRGTARRILRSASGSATPLPPHHLH 124


>11_03_0196 - 11490624-11490923,11493561-11493599,11494091-11494897
          Length = 381

 Score = 28.3 bits (60), Expect = 8.8
 Identities = 25/109 (22%), Positives = 50/109 (45%), Gaps = 7/109 (6%)
 Frame = -3

Query: 505 YASAMVTSTSTPG-SMLIEVICFTISEGECRSITLL-W-----IRI*KRSQVFEPSPQGV 347
           Y +  +  T  P  +++++  C+T+S  E  S+ L  W     ++I  + +   PS +  
Sbjct: 251 YVAGDLFHTVPPAQAVMLKRFCYTLSSREMISLVLHHWSDDDCVKILTQCRKAIPSREEG 310

Query: 346 FRVVIRRILVGMRTGPFTRSFCFLAPLMRSAQTFSSERTLREVRVILMR 200
            +V+I  ILVG   GP       +  ++    T   +R  R+ R + ++
Sbjct: 311 GKVIIIEILVGPSLGPVMFEAQLMMDMLMLVNTRGRQRDERDWRDLFLK 359


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,179,968
Number of Sequences: 37544
Number of extensions: 438649
Number of successful extensions: 1120
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 1076
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1119
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2530383840
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)