Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP26_F_F05
         (897 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

L06498-1|AAA60286.1|  119|Homo sapiens ribosomal protein S20 pro...   200   7e-51
BC087850-1|AAH87850.1|  119|Homo sapiens ribosomal protein S20 p...   200   7e-51
BC007507-1|AAH07507.1|  119|Homo sapiens ribosomal protein S20 p...   200   7e-51
AB061842-1|BAB79480.1|  119|Homo sapiens ribosomal protein S20 p...   200   7e-51
AB007156-1|BAA25820.1|   60|Homo sapiens ribosomal protein S20 p...   126   1e-28
BC101386-1|AAI01387.1|  576|Homo sapiens PLEKHN1 protein protein.      31   4.3  
AL645608-8|CAI15570.1|  611|Homo sapiens pleckstrin homology dom...    31   4.3  
L31584-1|AAA74230.1|  378|Homo sapiens G protein-coupled recepto...    30   9.9  
L31581-1|AAA74231.1|  378|Homo sapiens G protein-coupled recepto...    30   9.9  
L08176-1|AAA58615.1|  378|Homo sapiens EBV induced G-protein cou...    30   9.9  
EF064758-1|ABK41941.1|  378|Homo sapiens chemokine (C-C motif) r...    30   9.9  
BC035343-1|AAH35343.1|  378|Homo sapiens chemokine (C-C motif) r...    30   9.9  
AY587876-1|AAT52232.1|  378|Homo sapiens CC chemokine receptor 7...    30   9.9  

>L06498-1|AAA60286.1|  119|Homo sapiens ribosomal protein S20
           protein.
          Length = 119

 Score =  200 bits (487), Expect = 7e-51
 Identities = 98/116 (84%), Positives = 104/116 (89%), Gaps = 1/116 (0%)
 Frame = +3

Query: 159 KDIEKPQAEVS-PIHRIRITLTSRNVRSLEKVCADLINGAKKQKLRVKGPVRMPTKILRI 335
           KD  K   E    IHRIRITLTSRNV+SLEKVCADLI GAK++ L+VKGPVRMPTK LRI
Sbjct: 4   KDTGKTPVEPEVAIHRIRITLTSRNVKSLEKVCADLIRGAKEKNLKVKGPVRMPTKTLRI 63

Query: 336 TTRKTPCGEGSKTWDRFQMRIHKRVIDLHSPSEIVKQITSINIEPGVEVEVTIADA 503
           TTRKTPCGEGSKTWDRFQMRIHKR+IDLHSPSEIVKQITSI+IEPGVEVEVTIADA
Sbjct: 64  TTRKTPCGEGSKTWDRFQMRIHKRLIDLHSPSEIVKQITSISIEPGVEVEVTIADA 119


>BC087850-1|AAH87850.1|  119|Homo sapiens ribosomal protein S20
           protein.
          Length = 119

 Score =  200 bits (487), Expect = 7e-51
 Identities = 98/116 (84%), Positives = 104/116 (89%), Gaps = 1/116 (0%)
 Frame = +3

Query: 159 KDIEKPQAEVS-PIHRIRITLTSRNVRSLEKVCADLINGAKKQKLRVKGPVRMPTKILRI 335
           KD  K   E    IHRIRITLTSRNV+SLEKVCADLI GAK++ L+VKGPVRMPTK LRI
Sbjct: 4   KDTGKTPVEPEVAIHRIRITLTSRNVKSLEKVCADLIRGAKEKNLKVKGPVRMPTKTLRI 63

Query: 336 TTRKTPCGEGSKTWDRFQMRIHKRVIDLHSPSEIVKQITSINIEPGVEVEVTIADA 503
           TTRKTPCGEGSKTWDRFQMRIHKR+IDLHSPSEIVKQITSI+IEPGVEVEVTIADA
Sbjct: 64  TTRKTPCGEGSKTWDRFQMRIHKRLIDLHSPSEIVKQITSISIEPGVEVEVTIADA 119


>BC007507-1|AAH07507.1|  119|Homo sapiens ribosomal protein S20
           protein.
          Length = 119

 Score =  200 bits (487), Expect = 7e-51
 Identities = 98/116 (84%), Positives = 104/116 (89%), Gaps = 1/116 (0%)
 Frame = +3

Query: 159 KDIEKPQAEVS-PIHRIRITLTSRNVRSLEKVCADLINGAKKQKLRVKGPVRMPTKILRI 335
           KD  K   E    IHRIRITLTSRNV+SLEKVCADLI GAK++ L+VKGPVRMPTK LRI
Sbjct: 4   KDTGKTPVEPEVAIHRIRITLTSRNVKSLEKVCADLIRGAKEKNLKVKGPVRMPTKTLRI 63

Query: 336 TTRKTPCGEGSKTWDRFQMRIHKRVIDLHSPSEIVKQITSINIEPGVEVEVTIADA 503
           TTRKTPCGEGSKTWDRFQMRIHKR+IDLHSPSEIVKQITSI+IEPGVEVEVTIADA
Sbjct: 64  TTRKTPCGEGSKTWDRFQMRIHKRLIDLHSPSEIVKQITSISIEPGVEVEVTIADA 119


>AB061842-1|BAB79480.1|  119|Homo sapiens ribosomal protein S20
           protein.
          Length = 119

 Score =  200 bits (487), Expect = 7e-51
 Identities = 98/116 (84%), Positives = 104/116 (89%), Gaps = 1/116 (0%)
 Frame = +3

Query: 159 KDIEKPQAEVS-PIHRIRITLTSRNVRSLEKVCADLINGAKKQKLRVKGPVRMPTKILRI 335
           KD  K   E    IHRIRITLTSRNV+SLEKVCADLI GAK++ L+VKGPVRMPTK LRI
Sbjct: 4   KDTGKTPVEPEVAIHRIRITLTSRNVKSLEKVCADLIRGAKEKNLKVKGPVRMPTKTLRI 63

Query: 336 TTRKTPCGEGSKTWDRFQMRIHKRVIDLHSPSEIVKQITSINIEPGVEVEVTIADA 503
           TTRKTPCGEGSKTWDRFQMRIHKR+IDLHSPSEIVKQITSI+IEPGVEVEVTIADA
Sbjct: 64  TTRKTPCGEGSKTWDRFQMRIHKRLIDLHSPSEIVKQITSISIEPGVEVEVTIADA 119


>AB007156-1|BAA25820.1|   60|Homo sapiens ribosomal protein S20
           protein.
          Length = 60

 Score =  126 bits (303), Expect = 1e-28
 Identities = 57/60 (95%), Positives = 59/60 (98%)
 Frame = +3

Query: 297 KGPVRMPTKILRITTRKTPCGEGSKTWDRFQMRIHKRVIDLHSPSEIVKQITSINIEPGV 476
           KGPVRMPTK LRITTRKTPCGEGSKTWDRFQMRIHKR+IDLHSPSEIVKQITSI+IEPGV
Sbjct: 1   KGPVRMPTKTLRITTRKTPCGEGSKTWDRFQMRIHKRLIDLHSPSEIVKQITSISIEPGV 60


>BC101386-1|AAI01387.1|  576|Homo sapiens PLEKHN1 protein protein.
          Length = 576

 Score = 31.5 bits (68), Expect = 4.3
 Identities = 27/85 (31%), Positives = 35/85 (41%), Gaps = 4/85 (4%)
 Frame = +2

Query: 98  KSCLSRPE----FNKQHGSRCSVRQRHRETPGRGLPYPPHQDHSYFSQCALTREGLC*PH 265
           +SC S P      +K+   +    QRHR +   G P PP       S     REG   P 
Sbjct: 473 RSCSSGPAGPYLLSKKGALQSRAAQRHRGSAKDGGPQPPDAPQLVSS----AREGS--PE 526

Query: 266 QWSQETEAACKGPSPHANQDPAYHH 340
            W   T+    G SP  ++DP Y H
Sbjct: 527 PWLPLTD----GRSPRRSRDPGYDH 547


>AL645608-8|CAI15570.1|  611|Homo sapiens pleckstrin homology domain
           containing, family N member 1 protein.
          Length = 611

 Score = 31.5 bits (68), Expect = 4.3
 Identities = 27/85 (31%), Positives = 35/85 (41%), Gaps = 4/85 (4%)
 Frame = +2

Query: 98  KSCLSRPE----FNKQHGSRCSVRQRHRETPGRGLPYPPHQDHSYFSQCALTREGLC*PH 265
           +SC S P      +K+   +    QRHR +   G P PP       S     REG   P 
Sbjct: 508 RSCSSGPAGPYLLSKKGALQSRAAQRHRGSAKDGGPQPPDAPQLVSS----AREGS--PE 561

Query: 266 QWSQETEAACKGPSPHANQDPAYHH 340
            W   T+    G SP  ++DP Y H
Sbjct: 562 PWLPLTD----GRSPRRSRDPGYDH 582


>L31584-1|AAA74230.1|  378|Homo sapiens G protein-coupled receptor
           protein.
          Length = 378

 Score = 30.3 bits (65), Expect = 9.9
 Identities = 17/51 (33%), Positives = 27/51 (52%)
 Frame = -2

Query: 758 IVVVNLFXAAYNGYX*SNSITNFTNKAFFSLHSSCGLSKLINVSYHVWIQL 606
           +VV  +F   YNG   + ++ NF   +     S+C LSK +N++Y V   L
Sbjct: 269 VVVFIVFQLPYNGVVLAQTVANFNITS-----STCELSKQLNIAYDVTYSL 314


>L31581-1|AAA74231.1|  378|Homo sapiens G protein-coupled receptor
           protein.
          Length = 378

 Score = 30.3 bits (65), Expect = 9.9
 Identities = 17/51 (33%), Positives = 27/51 (52%)
 Frame = -2

Query: 758 IVVVNLFXAAYNGYX*SNSITNFTNKAFFSLHSSCGLSKLINVSYHVWIQL 606
           +VV  +F   YNG   + ++ NF   +     S+C LSK +N++Y V   L
Sbjct: 269 VVVFIVFQLPYNGVVLAQTVANFNITS-----STCELSKQLNIAYDVTYSL 314


>L08176-1|AAA58615.1|  378|Homo sapiens EBV induced G-protein
           coupled receptor protein.
          Length = 378

 Score = 30.3 bits (65), Expect = 9.9
 Identities = 17/51 (33%), Positives = 27/51 (52%)
 Frame = -2

Query: 758 IVVVNLFXAAYNGYX*SNSITNFTNKAFFSLHSSCGLSKLINVSYHVWIQL 606
           +VV  +F   YNG   + ++ NF   +     S+C LSK +N++Y V   L
Sbjct: 269 VVVFIVFQLPYNGVVLAQTVANFNITS-----STCELSKQLNIAYDVTYSL 314


>EF064758-1|ABK41941.1|  378|Homo sapiens chemokine (C-C motif)
           receptor 7 protein.
          Length = 378

 Score = 30.3 bits (65), Expect = 9.9
 Identities = 17/51 (33%), Positives = 27/51 (52%)
 Frame = -2

Query: 758 IVVVNLFXAAYNGYX*SNSITNFTNKAFFSLHSSCGLSKLINVSYHVWIQL 606
           +VV  +F   YNG   + ++ NF   +     S+C LSK +N++Y V   L
Sbjct: 269 VVVFIVFQLPYNGVVLAQTVANFNITS-----STCELSKQLNIAYDVTYSL 314


>BC035343-1|AAH35343.1|  378|Homo sapiens chemokine (C-C motif)
           receptor 7 protein.
          Length = 378

 Score = 30.3 bits (65), Expect = 9.9
 Identities = 17/51 (33%), Positives = 27/51 (52%)
 Frame = -2

Query: 758 IVVVNLFXAAYNGYX*SNSITNFTNKAFFSLHSSCGLSKLINVSYHVWIQL 606
           +VV  +F   YNG   + ++ NF   +     S+C LSK +N++Y V   L
Sbjct: 269 VVVFIVFQLPYNGVVLAQTVANFNITS-----STCELSKQLNIAYDVTYSL 314


>AY587876-1|AAT52232.1|  378|Homo sapiens CC chemokine receptor 7
           protein.
          Length = 378

 Score = 30.3 bits (65), Expect = 9.9
 Identities = 17/51 (33%), Positives = 27/51 (52%)
 Frame = -2

Query: 758 IVVVNLFXAAYNGYX*SNSITNFTNKAFFSLHSSCGLSKLINVSYHVWIQL 606
           +VV  +F   YNG   + ++ NF   +     S+C LSK +N++Y V   L
Sbjct: 269 VVVFIVFQLPYNGVVLAQTVANFNITS-----STCELSKQLNIAYDVTYSL 314


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 114,470,027
Number of Sequences: 237096
Number of extensions: 2501183
Number of successful extensions: 5131
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 4847
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5119
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 11548247776
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)