Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP26_F_F04
         (875 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z30342-1|CAA82998.1|  356|Drosophila melanogaster torso like pro...    38   0.018
X75614-1|CAA53285.1|  353|Drosophila melanogaster torso-like pro...    38   0.018
AY071336-1|AAL48958.1|  353|Drosophila melanogaster RE37079p pro...    38   0.018
AE014297-3041|AAN13883.1|  353|Drosophila melanogaster CG6705-PB...    38   0.018
AE014297-3040|AAF55919.1|  353|Drosophila melanogaster CG6705-PA...    38   0.018

>Z30342-1|CAA82998.1|  356|Drosophila melanogaster torso like
           protein.
          Length = 356

 Score = 37.9 bits (84), Expect = 0.018
 Identities = 23/93 (24%), Positives = 36/93 (38%)
 Frame = -3

Query: 696 GTHYXXXFGTGHFIYQVXXXKRSGYNRXXLXXXIRNXXPXLPDNLRXXFSXXXXKHVGXI 517
           GTHY   + TG+ +YQV    R  Y+        +        +L   F+     H+G I
Sbjct: 202 GTHYVNSYTTGNSLYQVFVYSRKNYSMIKERIKSKGLNGLSKLDLYNYFAPWFAAHLGQI 261

Query: 516 KXXXGXXTVXFWGRGXXRDSXYLYXXPXLICLY 418
           +      TV  W R   +   Y+     L+ L+
Sbjct: 262 RSASANATVERWARRKLQYEYYVVKYVTLLKLH 294


>X75614-1|CAA53285.1|  353|Drosophila melanogaster torso-like
           protein.
          Length = 353

 Score = 37.9 bits (84), Expect = 0.018
 Identities = 23/93 (24%), Positives = 36/93 (38%)
 Frame = -3

Query: 696 GTHYXXXFGTGHFIYQVXXXKRSGYNRXXLXXXIRNXXPXLPDNLRXXFSXXXXKHVGXI 517
           GTHY   + TG+ +YQV    R  Y+        +        +L   F+     H+G I
Sbjct: 199 GTHYVNSYTTGNSLYQVFVYSRKNYSMIKERIKSKGLNGLSKLDLYNYFAPWFAAHLGQI 258

Query: 516 KXXXGXXTVXFWGRGXXRDSXYLYXXPXLICLY 418
           +      TV  W R   +   Y+     L+ L+
Sbjct: 259 RSASANATVERWARRKLQYEYYVVKYVTLLKLH 291


>AY071336-1|AAL48958.1|  353|Drosophila melanogaster RE37079p
           protein.
          Length = 353

 Score = 37.9 bits (84), Expect = 0.018
 Identities = 23/93 (24%), Positives = 36/93 (38%)
 Frame = -3

Query: 696 GTHYXXXFGTGHFIYQVXXXKRSGYNRXXLXXXIRNXXPXLPDNLRXXFSXXXXKHVGXI 517
           GTHY   + TG+ +YQV    R  Y+        +        +L   F+     H+G I
Sbjct: 199 GTHYVNSYTTGNSLYQVFVYSRKNYSMIKERIKSKGLNGLSKLDLYNYFAPWFAAHLGQI 258

Query: 516 KXXXGXXTVXFWGRGXXRDSXYLYXXPXLICLY 418
           +      TV  W R   +   Y+     L+ L+
Sbjct: 259 RSASANATVERWARRKLQYEYYVVKYVTLLKLH 291


>AE014297-3041|AAN13883.1|  353|Drosophila melanogaster CG6705-PB,
           isoform B protein.
          Length = 353

 Score = 37.9 bits (84), Expect = 0.018
 Identities = 23/93 (24%), Positives = 36/93 (38%)
 Frame = -3

Query: 696 GTHYXXXFGTGHFIYQVXXXKRSGYNRXXLXXXIRNXXPXLPDNLRXXFSXXXXKHVGXI 517
           GTHY   + TG+ +YQV    R  Y+        +        +L   F+     H+G I
Sbjct: 199 GTHYVNSYTTGNSLYQVFVYSRKNYSMIKERIKSKGLNGLSKLDLYNYFAPWFAAHLGQI 258

Query: 516 KXXXGXXTVXFWGRGXXRDSXYLYXXPXLICLY 418
           +      TV  W R   +   Y+     L+ L+
Sbjct: 259 RSASANATVERWARRKLQYEYYVVKYVTLLKLH 291


>AE014297-3040|AAF55919.1|  353|Drosophila melanogaster CG6705-PA,
           isoform A protein.
          Length = 353

 Score = 37.9 bits (84), Expect = 0.018
 Identities = 23/93 (24%), Positives = 36/93 (38%)
 Frame = -3

Query: 696 GTHYXXXFGTGHFIYQVXXXKRSGYNRXXLXXXIRNXXPXLPDNLRXXFSXXXXKHVGXI 517
           GTHY   + TG+ +YQV    R  Y+        +        +L   F+     H+G I
Sbjct: 199 GTHYVNSYTTGNSLYQVFVYSRKNYSMIKERIKSKGLNGLSKLDLYNYFAPWFAAHLGQI 258

Query: 516 KXXXGXXTVXFWGRGXXRDSXYLYXXPXLICLY 418
           +      TV  W R   +   Y+     L+ L+
Sbjct: 259 RSASANATVERWARRKLQYEYYVVKYVTLLKLH 291


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,110,292
Number of Sequences: 53049
Number of extensions: 127219
Number of successful extensions: 57
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 52
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 52
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 4250176164
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)