Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP26_F_F01
         (1080 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

10_01_0100 + 1209424-1209538,1210373-1211073,1211158-1211379,121...    30   3.7  
07_03_1136 + 24218601-24218734,24218769-24219906                       30   3.7  
02_05_0146 - 26267245-26267339,26267427-26267469,26267589-262677...    30   3.7  
04_03_0018 - 9434088-9434141,9434211-9434282,9434968-9435062,943...    29   4.8  
01_07_0082 - 40965947-40967023                                         29   4.8  
03_05_0136 + 21158917-21159939,21160183-21160241,21160259-211602...    29   6.4  

>10_01_0100 + 1209424-1209538,1210373-1211073,1211158-1211379,
            1211452-1211878,1212091-1213219,1213623-1213746,
            1214207-1214278,1215480-1215578,1215617-1215640,
            1215704-1215745,1215815-1215895,1215983-1216114,
            1216115-1216196,1216271-1216365,1218499-1218570,
            1218676-1218792,1219379-1219447,1219521-1219587,
            1219886-1220025
          Length = 1269

 Score = 29.9 bits (64), Expect = 3.7
 Identities = 13/27 (48%), Positives = 15/27 (55%)
 Frame = -1

Query: 1080 PXPXAAAPPGXPXLPXSXXGSRPVPSP 1000
            P P AAAPP  P  P    G++P  SP
Sbjct: 537  PSPTAAAPPPPPPPPPPPSGNKPAFSP 563


>07_03_1136 + 24218601-24218734,24218769-24219906
          Length = 423

 Score = 29.9 bits (64), Expect = 3.7
 Identities = 21/65 (32%), Positives = 22/65 (33%), Gaps = 5/65 (7%)
 Frame = +2

Query: 896  GXXPGPXXEXXADGXHXPPXPDKGAQXGSPRRARAGEGTG----RDP-XXEXGRXGXPGG 1060
            G  P         G   PP P  G   G+PRR   G G G    R P     G  G P G
Sbjct: 115  GGPPSLPPGAGGGGGARPPAPGGGGGGGAPRRVLGGGGGGGALARPPGGGRGGALGRPPG 174

Query: 1061 AAAXG 1075
                G
Sbjct: 175  GGGGG 179


>02_05_0146 - 26267245-26267339,26267427-26267469,26267589-26267725,
            26268172-26268299,26268419-26268495,26268593-26268679,
            26268817-26268933,26269115-26269165,26269383-26269497,
            26270033-26270292
          Length = 369

 Score = 29.9 bits (64), Expect = 3.7
 Identities = 15/29 (51%), Positives = 16/29 (55%)
 Frame = -1

Query: 1068 AAAPPGXPXLPXSXXGSRPVPSPALARRG 982
            AAA  G P LP S   S P P+PA A  G
Sbjct: 48   AAASGGSPDLPSSSSSSSPPPTPAAASFG 76


>04_03_0018 - 9434088-9434141,9434211-9434282,9434968-9435062,
            9435445-9435526,9435610-9435660,9435749-9435829,
            9435965-9436006,9436117-9436215,9438130-9438201,
            9438557-9438680,9438850-9439723,9440274-9440456,
            9440941-9442741,9442825-9443049,9443117-9443814,
            9444519-9444591
          Length = 1541

 Score = 29.5 bits (63), Expect = 4.8
 Identities = 17/52 (32%), Positives = 20/52 (38%), Gaps = 1/52 (1%)
 Frame = -1

Query: 1080 PXPXAAAPPGX-PXLPXSXXGSRPVPSPALARRGLPXCAPLSGFGGXXXPSA 928
            P P      G  P  P    G+ P P P     G+P   P+ G GG   P A
Sbjct: 1087 PLPPTLGDYGVAPPPPSIGAGAPPPPPPPGGITGVPPPPPIGGLGGHQAPPA 1138


>01_07_0082 - 40965947-40967023
          Length = 358

 Score = 29.5 bits (63), Expect = 4.8
 Identities = 16/43 (37%), Positives = 18/43 (41%)
 Frame = -1

Query: 1074 PXAAAPPGXPXLPXSXXGSRPVPSPALARRGLPXCAPLSGFGG 946
            P  AAP G    P    G    P P  A  G P   P +G+GG
Sbjct: 246  PSTAAPYGTAPPPQYGYGYPAQPPPPQAGYGYPPPPPQAGYGG 288


>03_05_0136 + 21158917-21159939,21160183-21160241,21160259-21160294,
            21160345-21160387,21160582-21160698,21162090-21162179,
            21162329-21162436,21162547-21162588
          Length = 505

 Score = 29.1 bits (62), Expect = 6.4
 Identities = 14/31 (45%), Positives = 17/31 (54%)
 Frame = -1

Query: 1080 PXPXAAAPPGXPXLPXSXXGSRPVPSPALAR 988
            P P AA  P  P    S   SRP P+P++AR
Sbjct: 25   PLPAAALSPVRPSARRSPAVSRPDPAPSIAR 55


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.305    0.125    0.371 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,183,222
Number of Sequences: 37544
Number of extensions: 223017
Number of successful extensions: 474
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 419
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 472
length of database: 14,793,348
effective HSP length: 83
effective length of database: 11,677,196
effective search space used: 3222906096
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.0 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 43 (21.9 bits)