Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP26_F_F01
(1080 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
L23982-1|AAA58965.1| 2912|Homo sapiens collagen type VII protein. 35 0.59
L02870-1|AAA75438.1| 2944|Homo sapiens alpha-1 type VII collagen... 35 0.59
AB209645-1|BAD92882.1| 1027|Homo sapiens alpha 1 type VII collag... 35 0.59
AK001021-1|BAA91470.1| 268|Homo sapiens protein ( Homo sapiens ... 33 1.4
S75420-1|AAB20835.2| 306|Homo sapiens collagen type VI alpha 1(... 33 2.4
BC132861-1|AAI32862.1| 276|Homo sapiens hypothetical protein LO... 32 4.2
BC126240-1|AAI26241.1| 276|Homo sapiens hypothetical protein LO... 32 4.2
BC052575-1|AAH52575.1| 1028|Homo sapiens collagen, type VI, alph... 32 4.2
AK123670-1|BAC85673.1| 276|Homo sapiens protein ( Homo sapiens ... 32 4.2
U94855-1|AAD03467.1| 357|Homo sapiens translation initiation fa... 31 7.3
CR456959-1|CAG33240.1| 357|Homo sapiens EIF3S5 protein. 31 7.3
BT006894-1|AAP35540.1| 357|Homo sapiens eukaryotic translation ... 31 7.3
BC000490-1|AAH00490.1| 357|Homo sapiens eukaryotic translation ... 31 7.3
AK095574-1|BAC04577.1| 350|Homo sapiens protein ( Homo sapiens ... 31 7.3
Y00706-1|CAA68698.1| 1212|Homo sapiens protein ( Human mRNA for ... 31 9.6
M26576-1|AAA53098.1| 1669|Homo sapiens alpha-1 type IV collagen ... 31 9.6
BC151220-1|AAI51221.1| 1669|Homo sapiens COL4A1 protein protein. 31 9.6
BC047305-1|AAH47305.1| 1075|Homo sapiens COL4A1 protein protein. 31 9.6
AL390755-2|CAM20295.1| 1318|Homo sapiens collagen type IV alpha ... 31 9.6
AL390755-1|CAH74130.1| 1669|Homo sapiens collagen type IV alpha ... 31 9.6
AL161773-2|CAM14222.1| 1318|Homo sapiens collagen type IV alpha ... 31 9.6
AL161773-1|CAH71365.1| 1669|Homo sapiens collagen type IV alpha ... 31 9.6
AB209646-1|BAD92883.1| 847|Homo sapiens COL4A1 protein variant ... 31 9.6
>L23982-1|AAA58965.1| 2912|Homo sapiens collagen type VII protein.
Length = 2912
Score = 34.7 bits (76), Expect = 0.59
Identities = 31/100 (31%), Positives = 34/100 (34%), Gaps = 5/100 (5%)
Frame = +2
Query: 791 GERXEPQAXXRXTET----RXPXXXXQRTXEGPXXXEEXGXXPGPXXEXXADGXHXPPXP 958
GE P R +T R R EGP + PG E +G PP P
Sbjct: 1697 GEPGPPGPPGRLVDTGPGAREKGEPGDRGQEGPRGPKGDPGLPGAPGERGIEGFRGPPGP 1756
Query: 959 DKGAQXGSPR-RARAGEGTGRDPXXEXGRXGXPGGAAAXG 1075
G P R AGE R P GR G G A G
Sbjct: 1757 Q-----GDPGVRGPAGEKGDRGPPGLDGRSGLDGKPGAAG 1791
>L02870-1|AAA75438.1| 2944|Homo sapiens alpha-1 type VII collagen
protein.
Length = 2944
Score = 34.7 bits (76), Expect = 0.59
Identities = 31/100 (31%), Positives = 34/100 (34%), Gaps = 5/100 (5%)
Frame = +2
Query: 791 GERXEPQAXXRXTET----RXPXXXXQRTXEGPXXXEEXGXXPGPXXEXXADGXHXPPXP 958
GE P R +T R R EGP + PG E +G PP P
Sbjct: 1697 GEPGPPGPPGRLVDTGPGAREKGEPGDRGQEGPRGPKGDPGLPGAPGERGIEGFRGPPGP 1756
Query: 959 DKGAQXGSPR-RARAGEGTGRDPXXEXGRXGXPGGAAAXG 1075
G P R AGE R P GR G G A G
Sbjct: 1757 Q-----GDPGVRGPAGEKGDRGPPGLDGRSGLDGKPGAAG 1791
>AB209645-1|BAD92882.1| 1027|Homo sapiens alpha 1 type VII collagen
precursor variant protein.
Length = 1027
Score = 34.7 bits (76), Expect = 0.59
Identities = 31/100 (31%), Positives = 34/100 (34%), Gaps = 5/100 (5%)
Frame = +2
Query: 791 GERXEPQAXXRXTET----RXPXXXXQRTXEGPXXXEEXGXXPGPXXEXXADGXHXPPXP 958
GE P R +T R R EGP + PG E +G PP P
Sbjct: 336 GEPGPPGPPGRLVDTGPGAREKGEPGDRGQEGPRGPKGDPGLPGAPGERGIEGFRGPPGP 395
Query: 959 DKGAQXGSPR-RARAGEGTGRDPXXEXGRXGXPGGAAAXG 1075
G P R AGE R P GR G G A G
Sbjct: 396 Q-----GDPGVRGPAGEKGDRGPPGLDGRSGLDGKPGAAG 430
>AK001021-1|BAA91470.1| 268|Homo sapiens protein ( Homo sapiens cDNA
FLJ10159 fis, clone HEMBA1003528. ).
Length = 268
Score = 33.5 bits (73), Expect = 1.4
Identities = 16/40 (40%), Positives = 19/40 (47%)
Frame = -1
Query: 1080 PXPXAAAPPGXPXLPXSXXGSRPVPSPALARRGLPXCAPL 961
P P A P P P S + P+P P + GLP APL
Sbjct: 75 PPPPGAPLPSLPFPPVSMMPNGPMPVPQMMNFGLPSLAPL 114
>S75420-1|AAB20835.2| 306|Homo sapiens collagen type VI alpha 1(VI)
chain protein.
Length = 306
Score = 32.7 bits (71), Expect = 2.4
Identities = 21/70 (30%), Positives = 23/70 (32%), Gaps = 2/70 (2%)
Frame = +2
Query: 872 GPXXXEEXGXXPGPXXEXXADGXHXPPXPD--KGAQXGSPRRARAGEGTGRDPXXEXGRX 1045
GP E PGP E G P PD G + G R G R P + G
Sbjct: 103 GPSGDEGPAGEPGPPGEKGEAGDEGNPGPDGAPGERGGPGERGPRGTPGTRGPRGDPGEA 162
Query: 1046 GXPGGAAAXG 1075
G G G
Sbjct: 163 GPQGDQGREG 172
>BC132861-1|AAI32862.1| 276|Homo sapiens hypothetical protein
LOC339524 protein.
Length = 276
Score = 31.9 bits (69), Expect = 4.2
Identities = 17/33 (51%), Positives = 17/33 (51%), Gaps = 1/33 (3%)
Frame = +2
Query: 980 SPRRARA-GEGTGRDPXXEXGRXGXPGGAAAXG 1075
SPR R G G GR P R G PG AAA G
Sbjct: 87 SPRSGRGPGRGGGRRPRLGAARSGCPGAAAAGG 119
>BC126240-1|AAI26241.1| 276|Homo sapiens hypothetical protein
LOC339524 protein.
Length = 276
Score = 31.9 bits (69), Expect = 4.2
Identities = 17/33 (51%), Positives = 17/33 (51%), Gaps = 1/33 (3%)
Frame = +2
Query: 980 SPRRARA-GEGTGRDPXXEXGRXGXPGGAAAXG 1075
SPR R G G GR P R G PG AAA G
Sbjct: 87 SPRSGRGPGRGGGRRPRLGAARSGCPGAAAAGG 119
>BC052575-1|AAH52575.1| 1028|Homo sapiens collagen, type VI, alpha 1
protein.
Length = 1028
Score = 31.9 bits (69), Expect = 4.2
Identities = 21/70 (30%), Positives = 23/70 (32%), Gaps = 2/70 (2%)
Frame = +2
Query: 872 GPXXXEEXGXXPGPXXEXXADGXHXPPXPD--KGAQXGSPRRARAGEGTGRDPXXEXGRX 1045
GP E PGP E G P PD G + G R G R P + G
Sbjct: 389 GPSGDEGQPGEPGPPGEKGEAGDEGNPGPDGAPGERGGPGERGPRGTPGTRGPRGDPGEA 448
Query: 1046 GXPGGAAAXG 1075
G G G
Sbjct: 449 GPQGDQGREG 458
>AK123670-1|BAC85673.1| 276|Homo sapiens protein ( Homo sapiens cDNA
FLJ41676 fis, clone HCASM2002502. ).
Length = 276
Score = 31.9 bits (69), Expect = 4.2
Identities = 17/33 (51%), Positives = 17/33 (51%), Gaps = 1/33 (3%)
Frame = +2
Query: 980 SPRRARA-GEGTGRDPXXEXGRXGXPGGAAAXG 1075
SPR R G G GR P R G PG AAA G
Sbjct: 87 SPRSGRGPGRGGGRRPRLGAARSGCPGAAAAGG 119
>U94855-1|AAD03467.1| 357|Homo sapiens translation initiation factor
3 47 kDa subunit protein.
Length = 357
Score = 31.1 bits (67), Expect = 7.3
Identities = 16/42 (38%), Positives = 21/42 (50%), Gaps = 1/42 (2%)
Frame = -1
Query: 1080 PXPXAAAPPGXPX-LPXSXXGSRPVPSPALARRGLPXCAPLS 958
P +APP P +P + S P P+PA A +P AP S
Sbjct: 4 PAVPVSAPPATPTPVPAAAPASVPAPTPAPAAAPVPAAAPAS 45
>CR456959-1|CAG33240.1| 357|Homo sapiens EIF3S5 protein.
Length = 357
Score = 31.1 bits (67), Expect = 7.3
Identities = 16/42 (38%), Positives = 21/42 (50%), Gaps = 1/42 (2%)
Frame = -1
Query: 1080 PXPXAAAPPGXPX-LPXSXXGSRPVPSPALARRGLPXCAPLS 958
P +APP P +P + S P P+PA A +P AP S
Sbjct: 4 PAVPVSAPPATPTPVPAAAPASVPAPTPAPAAAPVPAAAPAS 45
>BT006894-1|AAP35540.1| 357|Homo sapiens eukaryotic translation
initiation factor 3, subunit 5 epsilon, 47kDa protein.
Length = 357
Score = 31.1 bits (67), Expect = 7.3
Identities = 16/42 (38%), Positives = 21/42 (50%), Gaps = 1/42 (2%)
Frame = -1
Query: 1080 PXPXAAAPPGXPX-LPXSXXGSRPVPSPALARRGLPXCAPLS 958
P +APP P +P + S P P+PA A +P AP S
Sbjct: 4 PAVPVSAPPATPTPVPAAAPASVPAPTPAPAAAPVPAAAPAS 45
>BC000490-1|AAH00490.1| 357|Homo sapiens eukaryotic translation
initiation factor 3, subunit 5 epsilon, 47kDa protein.
Length = 357
Score = 31.1 bits (67), Expect = 7.3
Identities = 16/42 (38%), Positives = 21/42 (50%), Gaps = 1/42 (2%)
Frame = -1
Query: 1080 PXPXAAAPPGXPX-LPXSXXGSRPVPSPALARRGLPXCAPLS 958
P +APP P +P + S P P+PA A +P AP S
Sbjct: 4 PAVPVSAPPATPTPVPAAAPASVPAPTPAPAAAPVPAAAPAS 45
>AK095574-1|BAC04577.1| 350|Homo sapiens protein ( Homo sapiens cDNA
FLJ38255 fis, clone FCBBF3001020, highly similar to
EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT 5. ).
Length = 350
Score = 31.1 bits (67), Expect = 7.3
Identities = 16/42 (38%), Positives = 21/42 (50%), Gaps = 1/42 (2%)
Frame = -1
Query: 1080 PXPXAAAPPGXPX-LPXSXXGSRPVPSPALARRGLPXCAPLS 958
P +APP P +P + S P P+PA A +P AP S
Sbjct: 4 PAVPVSAPPATPTPVPAAAPASVPAPTPAPAAAPVPAAAPAS 45
>Y00706-1|CAA68698.1| 1212|Homo sapiens protein ( Human mRNA for
alpha1 chain of basement membrane (type IV) collagen.in
neoplastic tissue). ).
Length = 1212
Score = 30.7 bits (66), Expect = 9.6
Identities = 25/96 (26%), Positives = 30/96 (31%), Gaps = 1/96 (1%)
Frame = +2
Query: 791 GERXEPQAXXRXTETRXPXXXXQRTXEGPXXXEEXGXXPGPXXEXXADGXHXPPXPD-KG 967
GE+ EP R P + +G PG G PP P +
Sbjct: 1118 GEKGEPGLPGRGFPG-FPGAKGDKGSKGEVGFPGLAGSPGIPGSKGEQGFMGPPGPQGQP 1176
Query: 968 AQXGSPRRARAGEGTGRDPXXEXGRXGXPGGAAAXG 1075
GSP A G R P + G G PG G
Sbjct: 1177 GLPGSPGHATEGPKGDRGPQGQPGLPGLPGPMGPPG 1212
>M26576-1|AAA53098.1| 1669|Homo sapiens alpha-1 type IV collagen
protein.
Length = 1669
Score = 30.7 bits (66), Expect = 9.6
Identities = 25/96 (26%), Positives = 30/96 (31%), Gaps = 1/96 (1%)
Frame = +2
Query: 791 GERXEPQAXXRXTETRXPXXXXQRTXEGPXXXEEXGXXPGPXXEXXADGXHXPPXPD-KG 967
GE+ EP R P + +G PG G PP P +
Sbjct: 1163 GEKGEPGLPGRGFPG-FPGAKGDKGSKGEVGFPGLAGSPGIPGSKGEQGFMGPPGPQGQP 1221
Query: 968 AQXGSPRRARAGEGTGRDPXXEXGRXGXPGGAAAXG 1075
GSP A G R P + G G PG G
Sbjct: 1222 GLPGSPGHATEGPKGDRGPQGQPGLPGLPGPMGPPG 1257
>BC151220-1|AAI51221.1| 1669|Homo sapiens COL4A1 protein protein.
Length = 1669
Score = 30.7 bits (66), Expect = 9.6
Identities = 25/96 (26%), Positives = 30/96 (31%), Gaps = 1/96 (1%)
Frame = +2
Query: 791 GERXEPQAXXRXTETRXPXXXXQRTXEGPXXXEEXGXXPGPXXEXXADGXHXPPXPD-KG 967
GE+ EP R P + +G PG G PP P +
Sbjct: 1163 GEKGEPGLPGRGFPG-FPGAKGDKGSKGEVGFPGLAGSPGIPGSKGEQGFMGPPGPQGQP 1221
Query: 968 AQXGSPRRARAGEGTGRDPXXEXGRXGXPGGAAAXG 1075
GSP A G R P + G G PG G
Sbjct: 1222 GLPGSPGHATEGPKGDRGPQGQPGLPGLPGPMGPPG 1257
>BC047305-1|AAH47305.1| 1075|Homo sapiens COL4A1 protein protein.
Length = 1075
Score = 30.7 bits (66), Expect = 9.6
Identities = 25/96 (26%), Positives = 30/96 (31%), Gaps = 1/96 (1%)
Frame = +2
Query: 791 GERXEPQAXXRXTETRXPXXXXQRTXEGPXXXEEXGXXPGPXXEXXADGXHXPPXPD-KG 967
GE+ EP R P + +G PG G PP P +
Sbjct: 569 GEKGEPGLPGRGFPG-FPGAKGDKGSKGEVGFPGLAGSPGIPGSKGEQGFMGPPGPQGQP 627
Query: 968 AQXGSPRRARAGEGTGRDPXXEXGRXGXPGGAAAXG 1075
GSP A G R P + G G PG G
Sbjct: 628 GLPGSPGHATEGPKGDRGPQGQPGLPGLPGPMGPPG 663
>AL390755-2|CAM20295.1| 1318|Homo sapiens collagen type IV alpha 1
protein.
Length = 1318
Score = 30.7 bits (66), Expect = 9.6
Identities = 25/96 (26%), Positives = 30/96 (31%), Gaps = 1/96 (1%)
Frame = +2
Query: 791 GERXEPQAXXRXTETRXPXXXXQRTXEGPXXXEEXGXXPGPXXEXXADGXHXPPXPD-KG 967
GE+ EP R P + +G PG G PP P +
Sbjct: 812 GEKGEPGLPGRGFPG-FPGAKGDKGSKGEVGFPGLAGSPGIPGSKGEQGFMGPPGPQGQP 870
Query: 968 AQXGSPRRARAGEGTGRDPXXEXGRXGXPGGAAAXG 1075
GSP A G R P + G G PG G
Sbjct: 871 GLPGSPGHATEGPKGDRGPQGQPGLPGLPGPMGPPG 906
>AL390755-1|CAH74130.1| 1669|Homo sapiens collagen type IV alpha 1
protein.
Length = 1669
Score = 30.7 bits (66), Expect = 9.6
Identities = 25/96 (26%), Positives = 30/96 (31%), Gaps = 1/96 (1%)
Frame = +2
Query: 791 GERXEPQAXXRXTETRXPXXXXQRTXEGPXXXEEXGXXPGPXXEXXADGXHXPPXPD-KG 967
GE+ EP R P + +G PG G PP P +
Sbjct: 1163 GEKGEPGLPGRGFPG-FPGAKGDKGSKGEVGFPGLAGSPGIPGSKGEQGFMGPPGPQGQP 1221
Query: 968 AQXGSPRRARAGEGTGRDPXXEXGRXGXPGGAAAXG 1075
GSP A G R P + G G PG G
Sbjct: 1222 GLPGSPGHATEGPKGDRGPQGQPGLPGLPGPMGPPG 1257
>AL161773-2|CAM14222.1| 1318|Homo sapiens collagen type IV alpha 1
protein.
Length = 1318
Score = 30.7 bits (66), Expect = 9.6
Identities = 25/96 (26%), Positives = 30/96 (31%), Gaps = 1/96 (1%)
Frame = +2
Query: 791 GERXEPQAXXRXTETRXPXXXXQRTXEGPXXXEEXGXXPGPXXEXXADGXHXPPXPD-KG 967
GE+ EP R P + +G PG G PP P +
Sbjct: 812 GEKGEPGLPGRGFPG-FPGAKGDKGSKGEVGFPGLAGSPGIPGSKGEQGFMGPPGPQGQP 870
Query: 968 AQXGSPRRARAGEGTGRDPXXEXGRXGXPGGAAAXG 1075
GSP A G R P + G G PG G
Sbjct: 871 GLPGSPGHATEGPKGDRGPQGQPGLPGLPGPMGPPG 906
>AL161773-1|CAH71365.1| 1669|Homo sapiens collagen type IV alpha 1
protein.
Length = 1669
Score = 30.7 bits (66), Expect = 9.6
Identities = 25/96 (26%), Positives = 30/96 (31%), Gaps = 1/96 (1%)
Frame = +2
Query: 791 GERXEPQAXXRXTETRXPXXXXQRTXEGPXXXEEXGXXPGPXXEXXADGXHXPPXPD-KG 967
GE+ EP R P + +G PG G PP P +
Sbjct: 1163 GEKGEPGLPGRGFPG-FPGAKGDKGSKGEVGFPGLAGSPGIPGSKGEQGFMGPPGPQGQP 1221
Query: 968 AQXGSPRRARAGEGTGRDPXXEXGRXGXPGGAAAXG 1075
GSP A G R P + G G PG G
Sbjct: 1222 GLPGSPGHATEGPKGDRGPQGQPGLPGLPGPMGPPG 1257
>AB209646-1|BAD92883.1| 847|Homo sapiens COL4A1 protein variant
protein.
Length = 847
Score = 30.7 bits (66), Expect = 9.6
Identities = 25/96 (26%), Positives = 30/96 (31%), Gaps = 1/96 (1%)
Frame = +2
Query: 791 GERXEPQAXXRXTETRXPXXXXQRTXEGPXXXEEXGXXPGPXXEXXADGXHXPPXPD-KG 967
GE+ EP R P + +G PG G PP P +
Sbjct: 341 GEKGEPGLPGRGFPG-FPGAKGDKGSKGEVGFPGLAGSPGIPGSKGEQGFMGPPGPQGQP 399
Query: 968 AQXGSPRRARAGEGTGRDPXXEXGRXGXPGGAAAXG 1075
GSP A G R P + G G PG G
Sbjct: 400 GLPGSPGHATEGPKGDRGPQGQPGLPGLPGPMGPPG 435
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.305 0.125 0.371
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 88,889,000
Number of Sequences: 237096
Number of extensions: 1332004
Number of successful extensions: 3817
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 2279
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3757
length of database: 76,859,062
effective HSP length: 91
effective length of database: 55,283,326
effective search space used: 14815931368
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.0 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 43 (21.9 bits)
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